brainy/RELEASES.md
David Snelling 0a9d1d9a17 fix: extraction, multi-hop traversal, and aggregate result shape (BR-ADV-FEATURES-BUN)
Three advanced-API correctness fixes, all reproducible on Node (not Bun-specific):

- Entity/concept extraction returned []. SmartExtractor combined agreeing signals
  with a weighted sum compared against an absolute 0.60 gate, so a confident
  low-weight signal lost selection to a mediocre high-weight one that then failed
  the gate, dropping the whole result. Select and gate on a normalized weighted
  average instead. The public `confidence` option now controls the threshold (was
  a dead hardcoded 0.60), and the embedding-signal timeout is raised 100ms -> 2000ms
  so the neural signal is not silently dropped on slower runtimes.

- Multi-hop find({ connected }) returned only the 1-hop neighbour. executeGraphSearch
  ignored depth/via; it now delegates to the depth-aware neighbors() BFS.

- find({ aggregate }) hid groupKey/metrics/count under .metadata, so callers
  expecting AggregateResult saw empty rows. Expose those fields at the top level.

Adds real-embedding regression tests in tests/integration/advanced-apis-regression.test.ts.
2026-05-26 11:32:46 -07:00

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Markdown

# @soulcraft/brainy — Release Notes for Consumers
This file is the **quick reference for Soulcraft product sessions** tracking Brainy changes.
Full auto-generated changelog: `CHANGELOG.md` · Releases: https://github.com/soulcraftlabs/brainy/releases
**How to use:** Brainy is the underlying data engine for Workshop, Venue, Academy, and
Collective. The SDK wraps it — most products never call Brainy directly. Read this when:
- Upgrading `@soulcraft/brainy` in the SDK or a product
- Debugging data, query, or storage behaviour
- A new Brainy feature is available that SDK should expose
---
## v7.22.1 — 2026-05-26
**Affected products:** Anyone using `extractEntities()` / `extractConcepts()`, native
aggregation (`find({ aggregate })`), or multi-hop graph traversal
(`find({ connected: { depth } })`). Three advanced-API correctness fixes — all reproduce on
Node, so they were **not** Bun-specific despite the original report (BR-ADV-FEATURES-BUN).
### Entity/concept extraction no longer returns `[]`
`extractEntities()` / `extractConcepts()` returned empty for entity-rich text. The SmartExtractor
ensemble scored agreeing signals with a weighted **sum** against an absolute 0.60 gate, so a
confident low-weight signal (e.g. a name pattern at 0.82) lost selection to a mediocre
high-weight signal that then failed the gate — dropping the whole result. It now selects and
gates on a normalized weighted **average**. Also: the `confidence` option now actually controls
the threshold (was a dead hardcoded 0.60), and the embedding-signal timeout was raised
100ms → 2000ms so the neural signal isn't silently dropped on slower runtimes.
*Known limitation:* type accuracy on dense multi-entity sentences is still imperfect — a strong
indicator in one entity's surrounding text can bleed onto neighbours. Tracked separately.
### `find({ aggregate })` exposes `groupKey` / `metrics` / `count`
Aggregation always computed correct values, but rows nested them under `.metadata`, so callers
expecting the documented `AggregateResult` shape saw empty-looking rows. Those three fields are
now also present at the top level of each result row.
### Multi-hop `find({ connected: { depth } })` honours depth
Previously returned only the immediate (1-hop) neighbour at any depth because the graph-search
path ignored `depth` / `via`. It now performs the full depth-aware traversal.
---
## v7.22.0 — 2026-05-15
**Affected products:** All. Fixes a silent-data-loss class affecting `find()` and
`brain.stats()`, plus Cortex-compatibility regression from 7.21.0. Recommended
upgrade for everyone on 7.20.x or 7.21.x.
### Two correctness fixes
#### 1. `find({ where })` no longer silently returns `[]` (BR-FIND-WHERE-ZERO)
The 7.20.0 column-store refactor deleted the legacy sparse-index write path
but left `getStats()` and `getIds()` reading from sparse indices. New
workspaces had no sparse-index files, so:
- `brain.stats().entityCount` was `0` regardless of actual entity count
- `find({ where: { ... } })` returned `[]` regardless of actual matches
- `rebuildIndexesIfNeeded()` saw `0` entries → fired the `[Brainy] CRITICAL ...
Second rebuild result: 0 entries` log → application saw no indexed data
7.22.0 makes the ColumnStore the single source of truth post-7.20.0:
- `MetadataIndex.getStats()` reads from `ColumnStore.getIndexedFields()` and
`idMapper.size`. Entity count is now accurate across writer → close →
reader-open cycles.
- `MetadataIndex.getIdsFromChunks()` throws `BrainyError(FIELD_NOT_INDEXED)`
when neither column store nor legacy sparse index has the field.
- `MetadataIndex.getIdsForFilter()` catches per-clause, logs
`[brainy] find() where-clause referenced unindexed field(s): ...`, returns
`[]`. Production `find()` is now consistent with `brain.explain()`'s
`path: 'none'` diagnostic.
Separately, `BaseStorage.getNounType()` was hardcoded to return `'thing'`
since a type-cache removal in commit `42ae5be`. Every noun save attributed
the entity to `'thing'` regardless of its actual type, poisoning
`_system/type-statistics.json` and `brain.stats().entitiesByType`. 7.22.0
restores type-correct attribution:
- New `nounTypeByIdCache: Map<string, NounType>` on `BaseStorage`, populated
in `saveNounMetadata_internal` and consumed in `saveNoun_internal`.
- New `flushCounts()` override that persists `nounCountsByType` /
`verbCountsByType` alongside the per-entity counter. Readers opening the
same directory after a writer flush now see correct per-type counts.
**Self-heal at init.** If `loadTypeStatistics()` detects the poisoned-state
signature (all nouns attributed to `'thing'` with multiple non-`thing`
entities on disk), it auto-runs `rebuildTypeCounts()` once and rewrites the
file. A `[BaseStorage] Detected poisoned type-statistics.json signature ...`
warning is logged. Operators don't need to take any action — the first 7.22
open of a directory poisoned by 7.20.0/7.21.0 fixes it.
**`brainy inspect repair`** can also be used to manually trigger
`rebuildTypeCounts()`. It's now public on `BaseStorage`.
#### 2. Cortex 2.2.x no longer crashes 7.21.0 boot (BR-DEFENSIVE-INTERFACE)
7.21.0 added new storage-adapter methods (`supportsMultiProcessLocking`,
`acquireWriterLock`, etc.) and called them unconditionally. Cortex 2.2.0's
mmap storage adapter bundles a pre-7.21 `BaseStorage` and doesn't define
them, so Venue's 7.21.0 upgrade attempt threw
`TypeError: this.storage.supportsMultiProcessLocking is not a function`
at boot.
7.22.0 introduces `hasStorageMethod(name)` on Brainy and guards every new-
method call site. Older adapters degrade with a one-line warning at init:
```
[brainy] Storage adapter `CortexMmapStorage` predates the 7.21
multi-process methods. Writer locking and the flush-request RPC are
disabled for this directory. Upgrade the plugin (e.g.
`@soulcraft/cortex` ≥2.3.0) for full enforcement.
```
### Dead-code cleanup
Removed `MetadataIndexManager.dirtyChunks`, `dirtySparseIndices`, and the
`flushDirtyMetadata()` no-op machinery. These accumulators stopped being
populated when the sparse-index write path was deleted in 7.20.0; the
remaining 6 callers wasted async hops on an empty Map iteration.
### Upgrade notes
- **Behaviour change:** `find({ where: { unindexedField: ... } })` previously
returned `[]` silently. It now logs a one-line warning and still returns
`[]`. The diagnostic message names the field — use
`brain.explain({ where: { ... } })` for full diagnosis. No code change
needed for callers that already handle empty results.
- **Behaviour change (good):** `brain.stats()` and `brain.health()` now
report accurate per-type counts. If you previously relied on the buggy
`entitiesByType.thing` over-count, update consumers.
- **No API breaks.** Pure additive on the public surface.
### Cortex consumers
Cortex 2.2.x continues to work against 7.22.0 thanks to the defensive
guards, but for full multi-process protection on Cortex-backed stores and
to make sure Cortex's native MetadataIndex picks up the find-where-zero
fix, Cortex 2.3.0 is recommended. Tracked as `CX-MULTIPROC-METHOD` in the
internal platform handoff.
---
## v7.21.0 — 2026-05-15
**Affected products:** All consumers using filesystem storage (Venue, Workshop dev,
local development).
### Multi-process safety + first-class read-only inspector
Filesystem storage now enforces **single-writer, many-reader**. Previously, opening
a second writer process against a live data directory silently produced wrong query
results — no error, no warning, just empty or stale data. This release replaces
that footgun with a hard refusal at init time and a dedicated read-only inspection
mode.
#### New: `Brainy.openReadOnly()`
```ts
const reader = await Brainy.openReadOnly({
storage: { type: 'filesystem', rootDirectory: '/data/brain' }
})
const bookings = await reader.find({ where: { entityType: 'booking' } })
```
- Does NOT acquire the writer lock — coexists with a live writer.
- Every mutation method throws `Cannot mutate a read-only Brainy instance`.
- `flush()` and `close()` are safe (no-op + clean shutdown).
#### New: writer lock at init
- `new Brainy({ ... })` (default `mode: 'writer'`) acquires
`<rootDir>/locks/_writer.lock` containing `{ pid, hostname, startedAt, lastHeartbeat, version }`.
- A second writer on the same directory **throws** with the PID, hostname,
heartbeat, and a pointer to `openReadOnly()`.
- Stale-lock detection: same hostname + dead PID OR heartbeat > 60s ago → overwritten with a warning.
- Heartbeat: writer rewrites `lastHeartbeat` every 10s (unref'd timer).
- Override: pass `{ force: true }` to bypass when you've verified the existing lock is stale.
#### New: `brain.requestFlush({ timeoutMs })`
Cross-process RPC for inspectors to force a fresh snapshot:
- In-process: just calls `flush()`.
- Out-of-process: writes a request file, polls for ack. Times out gracefully.
- Watcher runs in every writer instance (filesystem only).
#### New: `brain.stats()`
Operator-facing summary: `entityCount`, `entitiesByType`, `relationCount`,
`relationsByType`, `fieldRegistry`, `indexHealth`, `storage.backend`, `writerLock`, `version`.
Designed for `/api/health` endpoints and incident triage.
#### New: `brain.explain(findParams)`
Shows which index path serves each `where` clause: `column-store` | `sparse-chunked` | `none`.
**This is the answer to "why is `find()` returning empty?"** — `path: "none"` means
the field has no index entries and the query will silently return `[]`. Includes
notes on likely causes (writer hasn't flushed; typo; field genuinely absent).
#### New: `brain.health()`
Invariant-check battery: HNSW vs metadata count parity, field registry sanity,
`_seeded` entity sweep, writer heartbeat freshness. Returns `{ overall: 'pass' | 'warn' | 'fail', checks: [...] }`.
#### New: `brainy inspect` CLI (13 subcommands)
All read-only by default (internally uses `openReadOnly()`):
```
brainy inspect stats <path>
brainy inspect find <path> --type Event --where '{"status":"paid"}' --limit 20
brainy inspect get <path> <id>
brainy inspect relations <path> <id> --direction both
brainy inspect explain <path> --where '{"entityType":"booking"}'
brainy inspect health <path>
brainy inspect sample <path> --type Event --n 20
brainy inspect fields <path>
brainy inspect dump <path> --type Event > backup.jsonl
brainy inspect watch <path> --type Event
brainy inspect backup <path> /backups/brain.tar
brainy inspect repair <path> # writer mode — stop live writer first
brainy inspect diff <pathA> <pathB>
```
Default behaviour: ask the writer to flush via the RPC first (skip with `--no-fresh`).
### Brainy + Cortex
Cortex segments (`*.cidx`) are immutable mmap files; `MANIFEST.json` uses atomic
rename. The single writer lock at `<rootDir>/locks/_writer.lock` covers both Brainy
and Cortex. Read-only inspectors mmap Cortex segments with zero coordination.
### What's NOT enforced yet
- **Cloud storage backends** (S3, GCS, R2, Azure) — no multi-process locking.
A best-effort warning logs in writer mode against non-filesystem backends.
- **The `find({ where })`-returns-0 root-cause bug** — tracked separately. The
new `brain.explain()` and `brain.health()` surface it loudly
(`path: 'none'`, `index-parity warn`) instead of letting it be silent.
### Upgrade notes
- **Default behaviour change:** opening a Brainy directory in writer mode while
another writer is live now THROWS where it previously silently produced wrong
results. If you have scripts that intentionally co-opened a writer directory,
switch them to `Brainy.openReadOnly()` or pass `{ force: true }`.
- **Cloud backends unchanged** — no lock acquisition for S3/GCS/R2/Azure.
- All existing APIs unchanged. Pure addition.
### Docs
- README "Single-Writer Model" section.
- `docs/concepts/multi-process.md` — full model + Cortex compatibility.
- `docs/guides/inspection.md` — operator recipes.
- JSDoc on every new API.
---
## v7.19.10 — 2026-02-24
**Affected products:** All Bun/ESM consumers (Workshop, Venue, Academy, SDK)
### ESM crypto fix in SSTable
Replaced `require('crypto')` with `import { createHash } from 'node:crypto'` in the
SSTable implementation. Fixes a crash in Bun and strict ESM environments where
CommonJS `require` is unavailable.
No API changes — upgrade and redeploy.
---
## v7.19.2 — 2026-02-18
**Affected products:** All
### Metadata index cleanup on delete
Fixed: metadata indexes were not cleaned up after `delete()` / `deleteMany()`. Stale
index entries could cause phantom results in metadata-filtered queries after deletion.
No API changes. If you were seeing ghost results in filtered queries, this fixes it.
---
## v7.18.0 — 2026-02-16
**Affected products:** Workshop, Venue, Academy (analytics, reporting, session summaries)
### Aggregation engine
New `brain.aggregate()` API — incremental SUM, COUNT, AVG, MIN, MAX with GROUP BY
and time window support. Computes over entity collections without loading all records
into memory.
```typescript
const result = await brain.aggregate({
collection: 'bookings',
metrics: [
{ field: 'revenue', fn: 'SUM' },
{ field: 'id', fn: 'COUNT' },
],
groupBy: 'staffId',
timeWindow: { field: 'createdAt', from: startOfMonth, to: now },
})
```
SDK exposure: `sdk.brainy.aggregate()` — available once SDK is updated to pass through.
---
## v7.17.0 — 2026-02-09
**Affected products:** All (schema evolution, data migrations)
### Migration system
New `brain.migrate()` API with error handling, validation, and enterprise hardening.
Run schema migrations reliably across Brainy data directories.
```typescript
await brain.migrate({
version: 3,
up: async (brain) => {
// transform entities, rename fields, etc.
},
})
```
---
## v7.16.0 — 2026-02-09
**Affected products:** All
### Data/metadata separation enforced + numeric range queries
- Entity `data` and `metadata` fields are now strictly separated at the storage layer
- Numeric range queries now supported in metadata filters: `{ age: { $gte: 18, $lt: 65 } }`
- Fixes edge cases where mixed data/metadata storage caused inconsistent query results
**Breaking for anyone storing numeric values in metadata and relying on range queries:**
verify your filter syntax matches the new `$gte/$lte/$gt/$lt` operators.
---
## v7.15.5 — 2026-02-02
**Affected products:** Anyone using `@soulcraft/cortex` plugin
### Plugin opt-in clarified
Cortex and other plugins are opt-in. Pass explicitly:
```typescript
new Brainy({ plugins: ['@soulcraft/cortex'] })
```
Without `plugins`, no external plugins are loaded regardless of what's installed.
---
## v7.15.2 — 2026-02-01
**Affected products:** All (data safety)
### Graph LSM flush on close
Fixed: graph LSM-trees were not flushed on `brain.close()`, risking data loss across
restarts. Graph edges written in the final seconds before shutdown are now guaranteed
to be persisted.
No API changes — upgrade immediately if running Brainy in a long-lived server process.