open-brainy/src/utils/distance.ts
David Snelling c6cc0de955
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fix(vfs): the VFS root never persists a zero-norm vector
A zero-norm vector is lawful inside brainy (cosine distance scores it at
maximum, never a false top hit) but a false attractor for a downstream
engine serving squared-euclidean distance, which cannot tell a real
all-zero vector apart from a legitimate origin point.

- The VFS root now persists with vector [] (the existing "unvectored"
  shape) instead of a real all-zero 384-dim placeholder, and is never
  routed into the deferred-embed pipeline.
- A one-time migration in the root-init path detects a pre-fix store's
  all-zero placeholder root (by norm, not length) and rewrites it to []
  through a new sanctioned Brainy method that keeps the canonical
  vectored-noun ledger honest and removes the row from the vector index.
- The vector-index write seam (AddToVectorIndexOperation,
  ReplaceInVectorIndexOperation, and the generation materializer's direct
  insert) now refuses any real all-zero vector before it reaches a
  provider, loudly naming the entity, while the canonical write still
  lands.
- add()'s dimension-pinning and HNSW-insert gates, and the add-params
  validator, now treat any empty vector as carrying no dimension
  information, closing a latent trap where an explicit `vector: []`
  would have pinned dimensions to 0.
2026-08-27 09:28:44 -07:00

148 lines
5 KiB
TypeScript

/**
* Distance functions for vector similarity calculations.
*
* Pure-JavaScript implementations using allocation-free indexed loops: a single
* pass over the two vectors with scalar accumulators and no per-element closures
* or intermediate objects. This is the open-core distance path (the native
* provider owns the SIMD/quantized billion-scale path); for the small/medium
* vectors it serves (e.g. 384-dim sentence embeddings) a tight loop keeps the
* whole computation in registers with zero GC pressure.
*
* MEASURED (tests/benchmarks/distance-microbench.mjs, dim=384, N=20000, median
* of 41): rewriting cosine from an object-accumulating `reduce` to this loop is
* ~6x on `number[]`; euclidean ~1.4x. (`number[]` is also measurably faster than
* `Float32Array` here — V8 widens f32→f64 on every element read — so the
* resident representation stays `number[]`.)
*/
import { DistanceFunction, Vector } from '../coreTypes.js'
/**
* Calculates the Euclidean (L2) distance between two vectors.
* Lower values indicate higher similarity.
*/
export const euclideanDistance: DistanceFunction = (a: Vector, b: Vector): number => {
if (a.length !== b.length) {
throw new Error('Vectors must have the same dimensions')
}
let sum = 0
const len = a.length
for (let i = 0; i < len; i++) {
const diff = a[i] - b[i]
sum += diff * diff
}
return Math.sqrt(sum)
}
/**
* Calculates the cosine distance between two vectors.
* Lower values indicate higher similarity. Range: 0 (identical) to 2 (opposite).
*/
export const cosineDistance: DistanceFunction = (a: Vector, b: Vector): number => {
if (a.length !== b.length) {
throw new Error('Vectors must have the same dimensions')
}
let dotProduct = 0
let normA = 0
let normB = 0
const len = a.length
for (let i = 0; i < len; i++) {
const av = a[i]
const bv = b[i]
dotProduct += av * bv
normA += av * av
normB += bv * bv
}
if (normA === 0 || normB === 0) {
return 2 // Maximum distance for zero vectors
}
const similarity = dotProduct / (Math.sqrt(normA) * Math.sqrt(normB))
// Convert cosine similarity (-1 to 1) to distance (0 to 2)
return 1 - similarity
}
/**
* True when `vector` is a REAL (non-empty) all-zero vector — the "false
* attractor" shape this engine's own cosine distance treats safely (a
* zero-norm operand always scores the MAXIMUM distance, see
* {@link cosineDistance}) but a downstream engine serving squared-euclidean
* distance cannot distinguish from a legitimate origin point. THE LAW: a
* zero-norm vector is not a vector — it never crosses an engine boundary
* (never handed to a vector-index provider as a searchable item).
*
* A length-0 vector is the UNRELATED "unvectored, not yet embedded" shape
* (the deferred-embed stub, a permanently-vectorless system row) and is
* deliberately NOT zero-norm here — callers checking for "nothing to index"
* should test `vector.length === 0` separately; this only flags the
* dangerous non-empty all-zero case.
*/
export function isZeroNormVector(vector: readonly number[]): boolean {
if (vector.length === 0) return false
for (let i = 0; i < vector.length; i++) {
if (vector[i] !== 0) return false
}
return true
}
/**
* Calculates the Manhattan (L1) distance between two vectors.
* Lower values indicate higher similarity.
*/
export const manhattanDistance: DistanceFunction = (a: Vector, b: Vector): number => {
if (a.length !== b.length) {
throw new Error('Vectors must have the same dimensions')
}
let sum = 0
const len = a.length
for (let i = 0; i < len; i++) {
sum += Math.abs(a[i] - b[i])
}
return sum
}
/**
* Calculates the dot-product similarity between two vectors, negated to a
* distance metric (lower is better).
*/
export const dotProductDistance: DistanceFunction = (a: Vector, b: Vector): number => {
if (a.length !== b.length) {
throw new Error('Vectors must have the same dimensions')
}
let dotProduct = 0
const len = a.length
for (let i = 0; i < len; i++) {
dotProduct += a[i] * b[i]
}
return -dotProduct
}
/**
* Batch distance calculation: the query vector against each candidate.
*
* With the distance functions now allocation-free indexed loops, this is a thin
* map over the (monomorphic, JIT-inlined) `distanceFunction` — no worker, no
* stringify/`new Function` reconstruction. Kept `async` for call-site
* compatibility with the HNSW search path.
*
* @param queryVector The query vector to compare against all candidates.
* @param vectors The candidate vectors.
* @param distanceFunction The distance function to use (default: Euclidean).
* @returns The distances, index-aligned with `vectors`.
*/
export async function calculateDistancesBatch(
queryVector: Vector,
vectors: Vector[],
distanceFunction: DistanceFunction = euclideanDistance
): Promise<number[]> {
const out = new Array<number>(vectors.length)
for (let i = 0; i < vectors.length; i++) {
out[i] = distanceFunction(queryVector, vectors[i])
}
return out
}