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4e058720b4 fix(index): a field holds every value kind it was written with, not the first one
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The metadata index fixed a field's value type from the first value it saw.
Every later value of another kind was coerced to that type, and when coercion
failed — `Number('electronics')` is NaN — the value was dropped from the index
with no error at all. The row stayed readable by id and by vector search and
vanished only from equality filters on that one field, which is what made it so
quiet: writing `category: 'electronics'` rows and then `category: 5` rows left
`where { category: 5 }` returning nothing, while the same rows in a
numbers-only corpus answered correctly.

The column store now keeps one posting column per (field, kind), where a kind
is a JavaScript typeof class. The first kind a field sees keeps the historical
`_column_index/<field>/` layout, so a single-kind field is byte-identical to
what earlier versions wrote and an index written before this opens unchanged;
each later kind takes its own column at `_column_index/<field>/k/<kind>/`.

Equality reads the column matching the query value's own kind, so `{c: 5}` and
`{c: '5'}` match different rows and neither is coerced into the other. Ranges
route by the kind of their bounds, and an unbounded range — the "has any value"
probe behind `exists` — reads every kind. A mixed field orders by kind first,
then by value, because a number and a string have no order between them. A
value that cannot be encoded for the column its own kind selected now raises
instead of being skipped: that path is unreachable by construction, and if it
is ever reached it is the silent drop this change exists to end.

Two neighbours fell out of the same routing. A boolean query value is now
encoded to the 1/0 the column stores, so boolean equality matches at all. And
an integer column widens to f64 the first time a non-integer arrives, so 4.5 is
stored as itself rather than rounded to 5 and answering the wrong query.

Field type inference reports every kind a field holds beside its dominant
reading, rather than leaving callers to treat one type as the whole answer.

Pins: mixed-kind equality in both write orders, `5` vs `'5'`, booleans mixed in,
a numeric range over a mixed field's numbers, close/reopen keeping every typed
posting, and an index in the pre-existing on-disk shape still reading.
`tests/critical-neural-validation.test.ts` — which writes `category` as strings
in one test and as numbers in another against one shared brain — passes whole
for the first time.

(cherry picked from commit a128f0eda5)
2026-09-03 09:07:43 -07:00
a99b1e83c4 chore: rename to @soulcraftlabs/brainy for Open Brainy on The Source
Prepares the repo for its new home at soulcraftlabs/open-brainy ahead
of the Forgejo transfer: package name, publish registry, release
script, and every install/import reference across docs, src, tests,
examples, and integrations now point at @soulcraftlabs/brainy on
The Source. The npmjs storefront leg and byte-identity pair
verification are stripped from the release script — The Source is
now the only publish target. README gains an Open Brainy explainer
and a registry note for consumers.

@soulcraft/brainy 10.4.2 was the last release under the old name.
2026-08-27 17:07:09 -07:00
68da66024c docs: correct rc-era time-travel staleness + record the embedding-model ordering constraint
- data-storage-architecture.md described transact() as 'the unit of history'
  (rc.2 era). Single-op retention has been the model since 8.0 — every write
  gets its own generation; transact() only groups several into one. Corrected.
- RELEASE-GUIDE.md now records the hard ordering constraint: no embedding-model
  change ships before vector model-version stamping + hard-error-on-mismatch
  lands.
2026-07-07 10:39:00 -07:00
606445cd61 feat(8.0): API simplification — remove neural()/Db.search, one storage path key, integration→0
8.0 RC cleanup toward "one place per thing, zero-config, no deprecation":

- Remove the `brain.neural()` clustering namespace (ImprovedNeuralAPI + the dead
  legacy NeuralAPI + the neural CLI + neural-only types). Similarity is `find({vector})`
  / `similar({to})`; attribute grouping is the aggregation `GROUP BY` engine. The separate
  entity-extraction / smart-import feature (NeuralImport, NeuralEntityExtractor, SmartExtractor,
  NaturalLanguageProcessor, `brain.extract()`/`brain.nlp()`) is kept.
- Remove `Db.search()`; `find()` is the one query verb (accepts a bare string or FindParams).
  Fix the bundled MCP client, which called a non-existent `brain.search(query, limit)` →
  now `find({ query, limit })`.
- Storage config: collapse to one canonical top-level `path` key. The pre-8.0 aliases
  (`rootDirectory`, `options.*`, `fileSystemStorage.*`) are removed and now THROW with the
  exact rename instead of silently defaulting to `./brainy-data` on upgrade. A single resolver
  feeds createStorage, the 7.x→8.0 migration probe, and the plugin-factory handoff, so a native
  storage provider resolves the identical root (no split-brain).
- Fix `similar({ threshold })`: the min-similarity filter was silently dropped; it is now
  applied as a post-filter on `result.score` (the documented way to bound semantic results).
- Fix `vfs.rename()` on a directory: child path updates spread the entity vector into `update()`
  and failed dimension validation; they are metadata-only updates now.
- Fix `vfs.move()`: copy+delete orphaned the content-addressed content blob (the destination
  shared the source hash, then unlink removed it). `move()` now delegates to `rename()` — an
  in-place path change that preserves the blob and the entity id, for files and directories.
- Fix streaming import: the bulk fast path never flushed mid-import nor signalled queryability.
  Entity writes are now chunked by a progressive flush interval (100 → 1000 → 5000); each chunk
  flushes and emits `progress.queryable`, so imported data is queryable during the import.
- Sweep all docs, comments, and JSDoc for the removed/changed APIs.

Integration suite: 49 files / 588 passed / 0 failed. Unit: 80 files / 1456 passed, no type errors.
2026-06-20 13:31:11 -07:00
1f7e365a4e chore(8.0): final pre-RC1 sweep — API consistency, named errors, orphans, zero-cast codebase 2026-06-11 14:51:00 -07:00
c44678390e feat(8.0): brain.fillSubtypes migration helper + pre-RC1 gap closure
- brain.fillSubtypes(rules): idempotent subtype back-fill for pre-8.0 data.
  One rule per NounType/VerbType (literal default or per-entry function);
  fills only entries still missing a subtype through the public update()/
  updateRelation() paths; returns { scanned, filled, skipped, errors, byType }.
  Full unit suite in tests/unit/brainy/fill-subtypes.test.ts.
- Fix getNouns/getVerbs pagination hasMore (peek one past the window) —
  was permanently false, silently truncating every multi-page walk.
- find({ near }) without near.id now throws a teaching error instead of an
  opaque storage sharding failure; CLI --threshold without --near applies a
  plain score floor.
- CLI init/close audit: every one-shot command init()s, close()s, and exits
  explicitly; delete the unmaintained interactive REPL; replace the cloud-era
  storage subcommands with status/batch-delete; new types/validate commands.
- requireSubtype JSDoc now documents the 8.0 default-on contract; audit()
  recommendation points at fillSubtypes.
- Docs: data-storage-architecture rewritten to the real 8.0 on-disk layout;
  README storage section reflects filesystem+memory and snapshots; eli5 and
  SEMANTIC_VFS /as-of/ semantics corrected; internal tracker IDs and
  .strategy references scrubbed from published files.
2026-06-11 10:53:55 -07:00
cc8037db10 docs(8.0): consistency-model concept + snapshots guide — Db API replaces branching docs 2026-06-11 08:37:26 -07:00
adda1570f3 docs(8.0): Phase F — deep clean across 21 docs
Aligned every public doc to the 8.0 contract: filesystem + memory adapters
only, vector index provider terminology (config.vector with recall +
quantization + persistMode knobs), no cloud storage adapters, no closed-
source product names.

Tier 1 — heavier rewrites:
- docs/architecture/storage-architecture.md
- docs/architecture/data-storage-architecture.md
- docs/architecture/distributed-storage.md DELETED — content was 100%
  cloud-coordination examples with no 8.0 substance.
- docs/guides/distributed-system.md DELETED — same reason; no inbound refs.
- docs/SCALING.md rewritten for single-node guidance.
- docs/PLUGINS.md, docs/augmentations/{COMPLETE-REFERENCE,README}.md:
  HnswProvider→VectorIndexProvider, hnsw→vector key.
- docs/PERFORMANCE.md, docs/BATCHING.md cloud-detection + sharding
  sections replaced with single-node vector tuning + filesystem framing.

Tier 2 — surgical renames + cloud-section deletions:
- architecture/{index,initialization-and-rebuild,overview}.md
- transactions.md, DEVELOPER_LEARNING_PATH.md
- vfs/{VFS_API_GUIDE,COMMON_PATTERNS}.md
- api/README.md, guides/{inspection,import-flow}.md

Tier 3 — light edits:
- docs/README.md, architecture/augmentation-system-audit.md

MIGRATION-V3-TO-V4.md untouched (internal migration doc, no stale terms).
2026-06-09 16:13:35 -07:00
364360d447 fix: exclude __words__ keyword index from corruption detection and getStats()
The __words__ keyword index stores 50-5000 entries per entity (one per
word), which inflated avg entries/entity well above the corruption
threshold of 100. This caused:

1. validateConsistency() to falsely detect corruption on every startup,
   triggering unnecessary clearAllIndexData() + rebuild() cycles
2. getStats() to log false "Metadata index may be corrupted" warnings
   and report inflated totalEntries/totalIds stats

Both methods now skip __words__ when counting, so stats and health
checks reflect metadata fields only (noun, type, createdAt, etc.).
Keyword search is unaffected since the __words__ field index itself
is not modified.
2026-01-27 15:38:21 -08:00
42ae5be455 feat: ID-first storage architecture + remove memory-unsafe APIs (v6.0.0)
BREAKING CHANGES:

**ID-First Storage Paths**
- Direct O(1) entity access without type lookups
- Before: entities/nouns/{TYPE}/metadata/{SHARD}/{ID}.json
- After:  entities/nouns/{SHARD}/{ID}/metadata.json
- Migration handled automatically on first init()

**Removed Memory-Unsafe APIs**
- Removed brain.merge() - loaded all entities into memory
- Removed brain.diff() - loaded all entities into memory
- Removed brain.data().backup() - loaded all entities into memory
- Removed brain.data().restore() - depended on backup()
- Removed CLI commands: backup, restore, cow merge

**Migration Paths**
- merge() → Use checkout() or manually copy entities with pagination
- diff() → Use asOf() with manual paginated comparison
- backup() → Use fork() for instant COW snapshots
- restore() → Use checkout() to switch to snapshot branch

Core Improvements:
-  All 8 storage adapters properly call super.init()
-  GraphAdjacencyIndex integration in BaseStorage.init()
-  Fixed ID-first path bugs (vector.json → vectors.json)
-  Fixed MemoryStorage.initializeCounts() for ID-first paths
-  New VFS APIs: du(), access(), find()
-  Comprehensive documentation with migration guides

Storage Adapters Fixed:
- MemoryStorage, FileSystemStorage, AzureBlobStorage
- GCSStorage, R2Storage, S3CompatibleStorage
- OPFSStorage, HistoricalStorageAdapter

Files Changed: 28 files, +1,075/-1,933 lines (net -858)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
2025-11-19 16:46:11 -08:00
3e8b9aacc8 feat: COW always-on architecture + cloud storage clear() fix (v5.11.0)
Major architectural improvements and critical bug fixes:

## COW Always-On Architecture
- Removed cowEnabled flag from BaseStorage (COW cannot be disabled)
- Eliminated marker file system (checkClearMarker, createClearMarker)
- Simplified all code paths to assume COW is always enabled
- COW automatically re-initializes after clear() operations

## Critical Bug Fix: Cloud Storage clear()
- Fixed GCS clear() using correct paths (branches/ instead of entities/nouns/)
- Fixed S3Compatible clear() path structure
- Fixed R2 clear() implementation
- Fixed Azure, FileSystem, OPFS, Memory clear() COW flag handling
- clear() now deletes: branches/, _cow/, _system/
- Result: Cloud buckets can now be fully cleared (previously impossible)

## Container Memory Detection
- Auto-detect Docker/K8s/Cloud Run memory limits (cgroup v1/v2)
- Smart memory allocation (75% graph data, 25% query operations)
- Environment variable support (CLOUD_RUN_MEMORY, MEMORY_LIMIT)
- Production-grade containerized deployment support

## CommitLog streamHistory Feature
- Added streamable commit history with pagination
- Efficient memory usage for large commit histories
- Support for branch filtering and time ranges

## Comprehensive Storage Documentation
- Complete v5.11.0 file structure reference
- Detailed path construction algorithms
- 8 common storage scenarios with examples
- Type-first storage, sharding, COW architecture explained
- Public docs: docs/architecture/data-storage-architecture.md (1063 lines)

## Files Modified (14 files)
- All 8 storage adapters (GCS, S3, R2, Azure, FS, OPFS, Memory, Historical)
- BaseStorage core architecture
- CommitLog with streaming
- Brainy memory configuration
- Parameter validation with container detection
- Storage architecture documentation

## Breaking Changes
NONE - COW was already enabled by default. This removes the ability to disable it.

## Migration
No action required. Upgrade and clear() will work correctly on cloud storage.

## Impact
- Users can now clear cloud storage buckets completely
- No more corrupted buckets after clear() operations
- Container deployments automatically optimize memory allocation
- COW is mandatory and always enabled (safer, simpler)

v5.11.0 - Production ready
2025-11-18 13:44:02 -08:00
00aae8023c chore(release): 4.0.0
Major release: Enterprise-scale cost optimization and performance features

Features:
- Cloud storage lifecycle management (GCS Autoclass, AWS Intelligent-Tiering, Azure)
- Batch operations (1000x faster deletions: 533 entities/sec vs 0.5/sec)
- FileSystem compression (60-80% space savings with gzip)
- OPFS quota monitoring for browser storage
- Enhanced CLI system (47 commands, 9 storage management commands)

Cost Impact:
- Up to 96% storage cost savings
- $138,000/year → $5,940/year @ 500TB scale

Breaking Changes: NONE
- 100% backward compatible
- All new features are opt-in
- No migration required
2025-10-17 14:48:34 -07:00
46c6af3f21 feat: implement always-adaptive caching with getCacheStats monitoring
Replaces lazy mode concept with always-adaptive caching strategy:

- Rename getLazyModeStats() → getCacheStats() with enhanced metrics
- Change lazyModeEnabled boolean → cachingStrategy enum ('preloaded' | 'on-demand')
- Update preloading threshold from 30% to 80% for better cache utilization
- Add comprehensive production monitoring and diagnostics
- Add memory detection for containers (Docker/K8s cgroups v1/v2)
- Add adaptive memory sizing from 2GB to 128GB+ systems

Breaking changes: None (backward compatible, deprecated lazy option ignored)

New APIs:
- getCacheStats(): Comprehensive cache performance statistics
- cachingStrategy field: Transparent strategy reporting
- Enhanced fairness metrics and memory pressure monitoring

Documentation:
- Add migration guide for v3.36.0
- Add operations/capacity-planning.md for enterprise deployments
- Update all examples and troubleshooting guides
- Rename monitor-lazy-mode.ts → monitor-cache-performance.ts
2025-10-10 14:09:30 -07:00
1966c39f24 fix: move metadata routing to base class, fix GCS/S3 system key crashes
Critical fix for GCS/S3 native storage adapters crashing on metadata index keys.

Problem:
- GCS and S3 adapters crashed with "Invalid UUID format" errors
- System keys like __metadata_field_index__status are NOT UUIDs
- Adapters incorrectly tried to shard all metadata keys as UUIDs

Solution:
- Move sharding/routing logic from adapters to BaseStorage class
- Add analyzeKey() method to detect system keys vs entity UUIDs
- System keys route to _system/ directory (no sharding)
- Entity UUIDs route to sharded directories (256 shards)
- All adapters now implement 4 primitive operations:
  * writeObjectToPath(path, data)
  * readObjectFromPath(path)
  * deleteObjectFromPath(path)
  * listObjectsUnderPath(prefix)

Benefits:
- Impossible for future adapters to repeat this mistake
- Zero breaking changes, full backward compatibility
- No data migration required
- Cleaner architecture with better separation of concerns

Updated adapters: GcsStorage, S3CompatibleStorage, OPFSStorage,
FileSystemStorage, MemoryStorage

Added: docs/architecture/data-storage-architecture.md
Updated: README.md with architecture docs link
2025-10-09 13:10:06 -07:00