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214c98b4d5 feat(log): log authority is the fleet default — adopt-at-open, oracle-gated; plus the power-cut throw-site cures and the loud torn-record contract
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THE DEFAULT FLIP (ruled on proven evidence — at-ack survived 301/301
acked-writes-through-power-cut in block-layer fault injection; deferred
tree authority demonstrably loses flush-covered acks): a brain with NO
stored authority artifact now ADOPTS LOG AUTHORITY AT OPEN. The oracle
gates the flip exactly as the guarded adoption path always did — curable
divergences baseline-backfilled, the flip lands ONLY on a green verdict —
and a brain that cannot verify STAYS tree-authoritative loudly, with the
refusal recorded on the switch artifact so subsequent opens are cheap.
config logAuthority: 'defer' is the explicit documented opt-out (no
automatic adoption; declared flush-window loss; adoptLogAuthority() flips
later). A stored artifact always wins. RELEASES.md carries the posture.

Two standing .fails debt pins FLIP TO HOLDING under the default: the
at-ack crash-survival gap and the ack-at-log durability target — both now
permanent asserted truths, not aspirations.

POWER-CUT THROW SITES (fault-injection findings, brainy-alone config):
- A manifest-listed-but-unloadable column segment QUARANTINES at
  discovery (loud once, counted always, quarantinedSegments() exposed for
  the heal) and the field serves its remaining segments DEGRADED — never
  a raw throw killing every query on the field. Real storage faults still
  propagate untouched.
- Torn generation artifacts (NaN/garbage in manifest or counter) DISCARD
  with narration at the store's open and recovery re-derives — plus a
  defensive finite-integer guard at the init consumer. Never a RangeError
  killing an open.

THE LOUD TORN-RECORD CONTRACT: an existing-but-unparseable stored record
now surfaces as a typed, counted TornRecordError on every entity-read
surface (including fifteen previously-blind per-item batch catches);
ENOENT stays clean-absent; artifact readers with designed absent-recovery
keep null-tolerance behind the loud floor. Disk corruption can no longer
read as silent data invisibility.

Suite migration: the default's pins inverted deliberately, generation
baselines made relative, quarantine-contract pins rewritten to the ruled
behavior.

Gates: tsc 0 · unit 2065/2065 (159 files) · integration 826 (93 files) ·
conformance 31/31 · kill-matrix 15/15 · torn-open guards 2/2.
2026-08-11 08:37:38 -07:00
67c606be69 fix(durability): three block-layer power-loss findings from the first fault-injection box run — all cured, matrix 15/15
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An internal cross-engine fault-injection run (frozen-platter power-loss
capture) surfaced three release-gating findings; each cured in its owning
layer, each pinned:

1. WHOLE-LOG REPLAY ON UNCLEAN OPEN (the big one): log-authority replay
   only covered facts ABOVE the manifest — but live canonical entity
   writes are tmp+rename without per-file fsync, and the group-commit
   flush syncs staging + manifest, never the live tree. Power loss could
   therefore vaporize acked canonical bytes BELOW the manifest while the
   log held every fact scan-clean (measured: 299 of 301 acks lost).
   Now: a clean close stamps a clean-shutdown marker (fsynced, written
   last); every open consumes it; an UNCLEAN open under log authority
   folds the ENTIRE log into canonical — whole-entity after-images make
   the re-apply idempotent and byte-safe. Zero cost on the happy path;
   crash recovery pays one narrated fold. Recovery is replay: a crash is
   just bigger lag.

2. TORN WRITER LOCK: power loss legally leaves the lock file present but
   empty; the parse failure read as 'no holder' while the O_EXCL claim
   EEXISTed forever — a PERMANENT lockout no staleness check could clear.
   An unparseable lock is stale by definition (no live holder has one):
   unlink loudly and re-loop; a racer rewriting a valid lock first wins.

3. PAIR GUARD: flush() called metadataIndex.stampWatermark unguarded;
   a replacement metadata provider without the method killed the pair at
   first flush. All three stamp calls are optional-chained — a missing
   stamp is a verdict-side rescan, never a flush crash.

Pins: whole-log fold restores rows vanished below the manifest ·
clean-shutdown marker lifecycle (stamp/consume/re-stamp) · torn-lock
recovery with a fresh write after · stampless-provider flush.
Gates: unit 2055/2055 · integration 824 · kill-matrix 15/15.
2026-08-10 14:48:32 -07:00
d1698fa5be docs: RELEASES.md frames the release as 10.0.0 — honest major (log format v2 forward-only); comment wording cleanup
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2026-08-10 12:41:58 -07:00
b47787bbf7 feat(embedding): deferred-embed markers become log records — the sidecar recovery path is deleted
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The private recovery discipline, applied to its own machinery: pending-
embed markers stop being sidecar files and become first-class log records
riding the write's OWN commit fact — embed.pending lands in the same
atomic append as its after-image (a marker can never be orphaned from its
write, or vice versa; in durable-at-ack mode it shares the write's
covering fsync — zero extra syncs), and the worker's landing commit rides
embed.landed with the inline vector. Crash recovery is now a FOLD of the
log (pending without a matching landed = recovered), skipped wholesale on
brains with no v2 history; the one-time legacy bridge folds existing
sidecar files in, migrates them as one fact, and deletes them —
idempotent under a crash mid-bridge. No code path writes the sidecar
again.

Plus the ENTITY-TRUTH digest law, found by this train's own pins:
canonical vector wrappers denormalize HNSW residue (connections + the
randomly-assigned node level) that the log deliberately does not carry —
the verification oracle digested it and would have reported false
state-differs on ~any nonzero-level node (a ~15% flake in the cutover pin
was the symptom). Both sides of every oracle comparison now normalize to
entity truth (nounEntityTruth); index residue has its own rebuild path
and is not entity state.

Pins: embed-markers-in-log 5/5 (same-generation marker, landed+fold-to-
zero, crash recovery via the log with the sidecar prefix EMPTY on disk,
legacy bridge, VFS hung-embedder ack) · deferred-embedding 5/5 unchanged
(the contract outlived its mechanism) · kill-matrix 11/11 · cutover 5/5
×10 runs (flake dead) · unit 2031/2031.
2026-08-10 11:27:07 -07:00
c95bea8887 feat(conformance): the golden-log fold oracle — encoder bytes and fold semantics pinned by content hash
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One deterministic v2 log (nine facts covering every fold-relevant behavior:
genesis, after-images with minted ints, a deferred embed pending→landed,
a sameAsGeneration vector ref, a verb, a tombstone, and an all-deduped
empty commit) whose ENCODED BYTES and FOLDED STATE are both pinned by
sha256 literals. The fixture (tests/fixtures/golden-log-v2.bin, 4128 B,
byte-verified against the encoder on every run) is the shared artifact a
second reader implementation consumes — it must reproduce the identical
fold digest; the pair is normative on disagreement. The fold law is
stated in prose beside the code: generation-ordered latest-per-id,
tombstone masking, embed.landed vector application, single-hop ref
resolution, key-sorted digest.

Also: decodeGroupV2 discriminated pad filler by RECORD COUNT, silently
swallowing legitimate empty commits (an all-deduped batch at a real
generation). Pads carry generation 0 — which writers can never mint — so
the generation is the honest discriminator; empty commits stay visible.

Pins: 4/4 (encode-exact, fixture-identical, fold-exact, human-readable
spot checks beside the hashes).
2026-08-10 11:02:40 -07:00
b53e6e8987 feat(engine): the wiring wave — stamps ride every flush, provider generations, waitForIndexed, adopt-backfill, match-all serves
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- Watermark stamping fans out at flush: all three projections stamped
  with the committed generation before their flushes persist.
- waitForIndexed(path?, {generation, timeoutMs}) — the one honest read
  barrier for write-then-recall consumers; typed timeout error carries
  the pending count and names the gauge; getIndexStatus() gains
  per-projection gauges. awaitPendingEmbeds() unchanged underneath.
- adoptLogAuthority() self-backfills curable divergences (pre-log
  records, witness drift) by identity re-commit before flipping — a
  fresh brain flips clean; log-ahead divergences still refuse loudly.
- The verification oracle gains VERB legs (all four divergence classes;
  unwired = honest verbsChecked: 0, never a scope claim).
- find({where: {}}) match-all serves (was silent-empty, warm AND cold;
  same fix in count/streaming/subgraph seeding); removeMany({where:{}})
  refuses typed — a match-all bulk delete must be explicit.
- Aggregation native envelope stamped via noteSourceGeneration before
  serializeState; the native-blob restore gates through the same
  adoption verdict as caller-side state (the unconditional adopt dies).
- LC8 pinned: a wholesale directory move opens and serves identically
  across all three intelligences, with history traveling.

Gates: unit 2031/2031 (156 files) · integration 812 (91 files) ·
conformance 27/27.
2026-08-10 10:55:11 -07:00
26c6025158 feat(log): v2 is the LIVE write format — envelope records with minted ints, genesis, sector seals; v1 readable forever
The cutover: new tail segments write format v2 (per-record [type, version,
cipherFlag, keyId] envelope; noun/verb after-images carry dense ints
MINTED AT APPEND from the id mapper — a rebuilt mapper reproduces
assignments exactly; log.genesis opens every new log with the id-space
width + a minted brain id; sync() seals to the header-declared sector
boundary with reader-invisible pad frames). Existing v1 segments are
never rewritten — per-segment decoder dispatch reads both formats and v2
facts map to the exact CommitFact shape all consumers already read.
Cutover on a live v1 log: an empty v1 tail re-heads in place; a non-empty
one is sealed by rotation, byte-identical. Records reserve the encryption
fields (cipherFlag 0 / keyId nil are the only legal values; anything else
refuses typed naming the needed newer reader) — crypto-ready with no
future bump on the compat surface. Empty-records facts are legal (an
all-deduped batch is a real generation — v1 semantics preserved; the
refusal there tore a column-store flush mid-commit in the full suite, the
consistency guard caught it loudly, and the root is fixed).

Golden byte vectors pinned for the second (native) reader implementation.
Pins: cutover 5/5 · codec 54 · kill-matrix stays 11/11.
2026-08-10 10:55:11 -07:00
13022c510b fix(log): acked writes survive power loss; rejected writes never silently commit — the kill-matrix goes 11/11 with zero .fails debt
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Two release-blocking findings from the durability kill-matrix, both fixed
in the owning layer:

1. LOG-AUTHORITY REPLAY AT OPEN: durable-at-ack fsynced the fact before
   the ack, but open() truncated every fact above the manifest — after a
   power loss that takes the un-fsynced tmp+rename canonical bytes, the
   acked write's ONLY durable copy was discarded. Now: under 'log'
   authority, open() REPLAYS intact facts above the manifest into
   canonical (FactLog.peekFactsAbove — CRC-gated, order-sorted) and
   advances the manifest to cover them; tree-authority brains keep the
   truncate contract they were promised. Pinned end to end: the power-loss
   row constructs the exact disk state (fsynced log, vanished canonical
   rename) and the acked write lives.

2. NO SILENT COMMIT: commitSingleOp buffered the generation BEFORE the
   fact append; an append failure (ENOSPC) rejected the caller but the
   next flush durably committed the generation with NO fact — a permanent
   silent log gap. Now the failure path un-buffers and returns the counter
   reservation: nothing commits, the log stays gap-free, and the canonical
   execute-residue orphan is the documented crash-equivalent.

Plus: the kill-matrix itself (11 rows — every commit-path fault point ×
reopen-as-crash recovery contract, at-ack variants, disk-full row; five
new zero-cost faultPoint sites), the log-authority pin suite (oracle
green/red/state-differs, flip refusal, switch survives reopen, 9/9), and
the group-commit covering pins (5/5).

Gates: unit 2002/2002 (152 files) · integration 785 · conformance 27/27.
2026-08-10 09:29:21 -07:00
3484107462 feat(log): fact-log format v2 codec — record envelope, type registry, genesis, sector seals; fault-injection shim
The two-implementation contract surface as one pure module (no I/O):
segment header v2 (formatVersion 2 + sealSize in the reserved bytes),
per-record [type u8, version u8] envelope killing the unknown-kind
misclassification trap, the 12-type registry (after-images with minted
ints, tombstones, batch.meta, embed.pending/landed, blob.manifest,
projection.note, bootstrap.baseline, log.genesis with id-space width and
TYPED width-mismatch refusal), vectorLeg inline|{sameAsGeneration} with
writer-enforced single-hop, sector-sealed groups with pad frames, torn-tail
discipline, and GOLDEN BYTE VECTORS pinned so a second (native) reader
implementation can conform byte-for-byte. 50 format pins + a
fault-injecting storage wrapper (tear/drop-sync/fail-append) with 13
self-tests. v1 segments remain readable; nothing writes v2 yet — the
live-format cutover is its own commit.
2026-08-10 09:29:06 -07:00
6595309765 feat(log): the guarded log-authority core — group-commit durable-at-ack, the per-brain switch, the verification oracle
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The storage-authority adoption path, guarded shape: the canonical tree
stays authoritative by default ('tree'); a brain flips to 'log' only
through the verification oracle, and the flip is stored, per-brain,
checked at open only.

- FactLog.ensureSynced(): classic group commit — concurrent writers
  append, then join ONE covering fsync (running + queued slots give the
  covering guarantee: the sync a caller awaits always starts after its
  append landed). Solo writer = immediate sync.
- GenerationStore.logDurability 'deferred' (default, byte-identical to
  today: fact durability rides the group-commit flush, ack latency
  unchanged) | 'at-ack' (log-authority mode: every single-op ack awaits a
  covering log fsync — an acked write's fact survives power loss, by
  contract). transact() was already durable-at-return in both modes.
- src/db/logAuthority.ts: the stored switch artifact
  (_system/log-authority.json, absent = tree), readLogAuthority, and the
  VERIFICATION ORACLE — replay the fact log, fold latest state per id
  (digests, never bodies — memory-bounded), diff against the canonical
  tree paged; verdict green iff every canonical row is exactly reproduced
  AND the log claims nothing canonical denies. Divergences are NAMED by
  class (pre-log-record → needs baseline backfill; state-differs;
  log-live-canonical-absent; log-tombstone-canonical-present). The flip
  REFUSES on red with the first divergence and the cure in the message.
- Brainy: authority read at open (log → durable-at-ack enabled);
  logAuthority() / verifyLogAuthority() / adoptLogAuthority() public API.

Nothing flips by itself; nothing changes for existing brains.
2026-08-06 10:08:18 -07:00
24bf6cdbc5 feat(namespace): NO SPECIAL NAMES + storage fidelity — the ruled completion of the field-addressing law
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The write side of the law, ruled 2026-08-03: data is either in main space
where developers can use anything, or it is in system.*.

- The reserved-name write door DIES: add/update/relate/updateRelation
  metadata bags accept EVERY name (confidence, type, id, data, level,
  content, ...) as ordinary user fields — indexed, filterable, sortable,
  aggregatable, identical to any other field. The remap/enforce/warn
  machinery, the reservedFieldPolicy config (now a typed init refusal),
  and the compile-time metadata key bans are all removed. The one write
  refusal left: keys spelled 'system.*' (namespace forgery), now enforced
  on all four write doors.
- STORED RECORDS GO NESTED (v2): engine fields top-level, the user bag
  nested verbatim under 'metadata', sealed by a format stamp — by-name
  storage discrimination is unsound once colliders are admitted. Legacy
  flat records stay readable forever through the shape-aware splitters
  (sound for them: the old door refused colliders). Time travel rides the
  same split (generation store snapshots whole records).
- Name-based index exclusions DIE: user frame indexes every name; the
  excludeFields/indexedFields knobs and their silent-[] holes are gone;
  bulk-payload protection is value-shape only, uniform across names.
- Consumer-sweep findings fixed in the same wave: per-type counts read
  the frozen 'system.type' column (addToIndex sort, affinity tracking,
  cold-count rehydration, VFS type bitmaps — legacy 'noun' fallback for
  pre-rebuild reads); resolveHiddenIds addresses 'system.visibility'
  (bare 'visibility' was a silent no-op under the law — VFS/system
  entities leaked into default reads).
- Fidelity fallout fixed in the owning layers: readEntityFieldAddress
  reads the bag first (colliders were absent-shadowed by its own guard)
  and never serves system addresses from the bag; blob history refs read
  the bag shape-aware; migration transforms now receive ONE normalized
  view (engine fields + nested bag) regardless of stored era, and stray
  flat-habit keys refuse with the fix in the message.
- THE REOPEN-COLLIDER CONFORMANCE CASE (required before any RC counts as
  gates-green): all ten collider names + plumbing names written as user
  fields, verified verbatim + queryable across live reads, flush+reopen,
  a forced epoch rebuild, and asOf time travel; relation mirror; forgery
  refusals; legacy flat-record compat. 8/8 green.

Gates: unit 1901/1901 (exit 0) · integration 758 (exit 0) · conformance
27/27 (exit 0) · consumer test sweep migrated (10 files).
2026-08-03 16:59:32 -07:00
48a6130a50 feat(namespace): write-door forgery refusal (user metadata keys may never start 'system.') + refusal messages name both spellings in every branch (the non-colliding case marks system.<f> honestly as NOT valid) — cross-engine message pin alignment
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2026-08-03 16:07:27 -07:00
8e962dabda feat(namespace): conformance green 19/19 — data-aware did-you-mean on unindexed bare addresses, ordering contract on the column top-K path (never drop, nulls last, ties by id), shape-complete addressed reads (entity views AND raw storage shapes, shadow-proof both scopes), per-key source matching for dotted addresses; refusal classes unified under UnresolvableFieldError
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2026-08-03 16:01:02 -07:00
7492b6cb59 feat(namespace): aggregation reads under the law + epoch 3 (the key-split rebuild) + THE ARMING COMMIT — the capability constant, the law module, and the typed refusals export from the package root; both engines' conformance suites light on this signal
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2026-08-03 15:53:13 -07:00
c2fb28a2f7 feat(namespace): egress guard + validation speak the law — whereMatcher's resolver reads system.* from the record and bare names from the metadata bag only (the bare-system switch is dead); validateFindParams refuses cursor/includeRelations/writeOnly typed (accepted-and-ignored dies as a class), validates order, and parses every orderBy address
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2026-08-03 15:51:14 -07:00
8f9a9989e9 feat(namespace): the one field-addressing law as a single source of truth — parseFieldAddress + the ruled ten-scalar system maps + plumbing invisibility + refusal builders (module only; query surfaces wire in next) 2026-08-03 13:27:36 -07:00
1865f60a1e Merge branch 'release/8.11.0' 2026-07-27 12:13:08 -07:00
63c1eeb902 feat: includeHidden — export carries every visibility tier for migration-grade canon completeness 2026-07-27 11:22:25 -07:00
4d196af41b feat: canonical enumeration mode for export — storage-walked, canon-complete, with an index-drift report 2026-07-27 11:08:19 -07:00
fc9f0d7222 Merge branch 'release/8.10.1'
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# Conflicts:
#	.forgejo/workflows/ci.yml
2026-07-24 16:44:05 -07:00
003e2a74ea fix: transaction timeouts are a typed no-hot-retry contract; engine-side non-retry pinned; dead transaction path removed
A production incident: a native-provider op ground 38-40s inside a transaction,
blew the apply-phase budget, rolled back, and a downstream pipeline hot-retried
the identical operation into a 6-minute CPU storm. Brainy itself never
auto-retried the timeout; the gap was that TransactionTimeoutError only said
"retryable" in prose, with nothing machine-readable for a caller to branch on.

- TransactionTimeoutError gains two typed, always-true fields: retryable
  (a later attempt may succeed once the slowness resolves or the budget is
  raised) and hotRetryUnsafe (an immediate identical retry re-pays the full
  cost that just timed out and can cascade into a CPU storm -- callers must
  latch and back off, never loop). context's existing telemetry fields
  (timeoutMs, operationIndex, elapsedMs, totalOperations, operationName) are
  now documented as the caller's backoff inputs.
- Updated the "retryable" doc-prose sites (transact()'s timeoutMs option,
  transactionBudgetFloorMs, Transaction.execute()'s contract) to point at
  the new fields instead of bare prose.
- Regression pin (tests/unit/transaction/timeout-never-internally-retried.test.ts):
  an execution counter proves the engine never re-drives a timed-out
  operation, through both the single-op engine TransactionManager/Transaction
  drives for every single-record write, and add()'s upsert-race retry loop
  (which must exit on the first TransactionTimeoutError, never treat it like
  the lost-insert-race signal it retries on).
- Removed TransactionManager.executeTransactionWithResult -- zero callers
  anywhere in the codebase.
2026-07-24 16:01:41 -07:00
1201e25543 feat: two-tier history reads + the repacker + generationDigest — D1+D3 wired end-to-end
The packed tier goes live inside GenerationStore:

- Two-tier reads: getDelta / readBeforeImage / readGenerationRecords
  fall through live-tier → sealed segments (live-tier-wins: a crash
  mid-fold leaves a duplicate representation, never a gap). Cold-open
  seeds committedRanges from the segment manifest via interval merge —
  packed generations resolve without their directories existing.
- repackHistory({timeBudgetMs, batchGenerations}): folds cold
  generations (older than the newest 1024) oldest-first into sealed
  segments, deleting per-generation directories only after segment +
  manifest are durable. Public API + automatic time-bounded pass at
  close() (before compaction, so reclaim can drop whole segments);
  re-representation only — the sole history transform under the
  archival profile. Early stop = consistent prefix, next pass resumes.
- compact(): packed generations reclaim logically in the loop and
  physically at whole-segment boundaries via dropSegmentsBelow (the
  frozen partial-segments-wait rule).
- generationDigest(g) (D8): deterministic content digest through g —
  sealed-segment checksum chain + live-tier delta hashes; O(segments +
  live window); RangeError out of range, GenerationCompactedError
  below the horizon (a gate can never silently pin reclaimed history).

Four end-to-end pins: asOf answers byte-identical across fold + cold
reopen with folded dirs physically gone; repack+reclaim composition;
digest reopen-stability/divergence/loud-horizon; budget no-op+resume.
2026-07-19 16:26:10 -07:00
d8acb3776b feat: generation-segment store — the D1+D3 packed-tier file format
First stage of the co-frozen D1+D3+repacking unit: the format core,
self-contained under _generations/segments/.

- seg-<firstGen,20pad>.bgs: append-once packs of consecutive
  generations (magic BGS1; frame = u32 len + u32 crc32c + msgpack
  [generation, timestamp, delta, records, flags]; flags reserves
  compressed-payload evolution without a format break). Sealed
  segments are immutable — fold refuses overlap with sealed ranges.
- seg-<firstGen>.idx: DERIVED sidecar (per-generation frame offsets +
  per-id generation postings + checksums); lost/corrupt sidecars
  rebuild from their segment loudly; a damaged segment (frame CRC
  mismatch) fails loudly, never serves wrong bytes.
- manifest.json: the one discovery path — open() reads it and never
  lists the packed backlog (the scan-wedge class's cure); refuses a
  newer manifest version rather than serving partial history.
- D3 semantics: dropSegmentsBelow reclaims WHOLE segments at
  boundaries only and bumps compactedBelow durably; archival-profile
  enforcement stays with the caller per the co-freeze.
- D8 rider: digestThroughPacked(g) — deterministic crc32c chain over
  sealed-segment checksums (+ frame-level prefix mid-segment),
  O(segments), reopen-stable.

Also fixes a cross-adapter contract bug the suite caught: memory
storage's deleteObjectFromPath ignored the raw-bytes store, so
deleteRawObject on a raw-bytes path (fact-log or segment files)
silently no-op'd — deletes now match filesystem unlink semantics.

Six pins. Wiring into GenerationStore (two-tier reads, the repacker,
cold-open manifest path) lands with the rest of the unit before its
release; cortex's fact-record/stamp shapes reconcile the sidecar
keying when they post.
2026-07-19 15:14:27 -07:00
f8e6da2b66 feat: scanFacts liveness contract — first batch or loud failure within a documented bound
Stage-2 D1 contract item (co-frozen): a fact scan may be slow, never
silent. batches() now races its FIRST pull against
SCANFACTS_FIRST_BATCH_MS (10s, exported; test-overridable) — a wedged
or unreadably slow store produces a loud abort naming the contract
instead of a consumer hanging indistinguishably from progress (the
production shape: a heal against a generations-backlogged brain
wedged silently on the first segment read).

Only the first pull is raced: the bound is time-to-first-batch (proof
the producer is alive), not per-batch pacing, and it runs only while
a pull is pending — consumer think-time between pulls never counts
against the producer (pinned).

Three pins: wedged-store loud failure within the bound, healthy scan
untouched end-to-end, slow-consumer immunity.
2026-07-19 14:54:36 -07:00
300d9f2a16 feat: flush() never compacts — history maintenance moves to close() with bounded passes
flush() is durability work: it must cost what the current window's
deltas cost, never what the history backlog costs. Under adaptive
retention the byte budget derives from free memory, so bulk-load
pressure shrank the budget exactly at peak write volume and flush paid
actual reclaim inline — a production deployment measured single writes
blocked 25-191s behind reclaim-on-flush.

- flush() no longer calls autoCompactHistory(); close() is THE
  auto-compaction site (already ran there; now alone).
- Every auto pass is time-bounded (CLOSE_COMPACTION_BUDGET_MS = 5s):
  reclamation is oldest-first, so an early stop is a consistent prefix
  and the next pass resumes. Explicit compactHistory() gains an
  optional timeBudgetMs for caller-chosen maintenance windows.
- Documented trade stated where operators read: a long-lived writer
  that never closes accumulates history until its next explicit
  compactHistory() — predictable writes, explicit maintenance.

Pins: flush-never-reclaims + close-reclaims-durably (db-mvcc), bounded
pass stops-then-resumes as a consistent prefix (generationStore unit).
2026-07-19 12:04:39 -07:00
6207e48b51 fix: O(1) adaptive retention accounting + historyStats fleet audit
Under default adaptive retention, every flush() recomputed total history
bytes by walking EVERY committed generation's delta — O(all generations)
with disk re-reads past the 4096-entry delta-cache bound. On a production
brain with 70,000+ accumulated generations this turned every write into a
full-tail scan (60-100s writes, escalating with history growth), even
though the free-RAM budget never tripped and nothing was ever reclaimed
(SELF-GENERATIONS-GROWTH).

historyBytes() now maintains a running total: seeded by one walk on first
use, then updated incrementally at both commit paths (+bytes) and the
compaction reclaim loop (−bytes), dropped on reopenAfterRestore. The
adaptive retention check on every flush is O(1). Invariant regression-
pinned: running total ≡ fresh walk through transact commits, single-op
group commits, and compaction.

New brain.historyStats() (exported HistoryStats): read-only generation
count / bytes / generation+timestamp range / horizon / retention mode /
effective budget — the one-call per-brain fleet audit for retention
exposure.
2026-07-18 10:51:37 -07:00
6ef9fcb7a2 feat: scaled transact budgets + labeled timeout diagnostics + envelope docs
- The transact apply budget scales with the batch — max(30s, opCount x 2s) —
  or is exactly the caller's new TransactOptions.timeoutMs. A flat 30s cap
  silently limited honest bulk work to ~15 operations on network-attached
  storage (~2s/op measured in a production import) while looking generous for
  small batches. Internal batch paths (removeMany chunks) get the same
  scaling via the shared transactTimeoutBudget helper.
- TransactionTimeoutError now reports the operation it stopped at as i/N with
  the operation's name, elapsed vs budgeted time, and states the batch rolled
  back atomically and is retryable; context carries the fields
  programmatically.
- The transact operational envelope is documented (optimistic-concurrency
  guide): budget math, chunking with ifAbsent idempotency, when to reach for
  addMany vs transact, and the precompute pattern (embedBatch + per-op
  vector) that keeps inference out of the commit path.
- Embedding claims made honest per an end-to-end probe of the built dist:
  batch and single embedding paths produce bit-identical vectors and a
  vector-supplied add is fully searchable, but batch throughput on the
  default WASM engine measures comparable to sequential (~160ms/text) — the
  5-10x speedup claim in the addMany JSDoc is replaced with the measured
  reality and the actual win (inference outside the budgeted write path).
2026-07-17 16:49:38 -07:00
593bb8b0f9 docs: external-backups/sparse-storage guide + generation fact log concept
- New public guide (guides/external-backups): the sparse-mmap reality
  for external backup tooling — why a brain directory can show 100+ GB
  apparent size on a small disk, which files are sparse, tar czSf /
  rsync --sparse / cp --sparse=always, live-store caveats, and what
  persist()/restore() already handle natively.
- New public concept (concepts/generation-fact-log): what facts are
  (after-image commit records, body-less tombstones), the crash-safety
  model (checksummed frames, reconcile-to-committed, absent = never
  committed), the scanFacts()/factSegmentPaths() surfaces with the
  telemetry shape, family stamps + open-time coherence, and the
  storage capability seam for plugin authors.
- Cross-link from the snapshots guide; sparse notes added to the
  public persist()/restore() JSDoc (the operator-facing sites).
2026-07-16 10:30:32 -07:00
d1ecee10f0 feat: committedGeneration capability + pinned durability/stability contracts
- storage.committedGeneration(): the committed watermark exposed on the
  fact-scan capability, so a provider compares its stamp's
  sourceGeneration against the store's truth without parsing the
  private manifest format (the capability source now carries both the
  live fact log and the committed closure).
- Pinned contract tests: fsync-before-ack (transact passes today; the
  single-op path is pinned via it.fails as the documented target —
  group commit must become LATENCY batching, ack waiting on the shared
  fsync, never durability skipping; the pin flips red when that lands
  so there is no cliff to discover) and scan-stability-under-rotation
  (a scan snapshot yields exactly its facts — no gaps, duplicates, or
  bleed-in — while segments rotate beneath it; the reclaim-during-scan
  variant lands with fact compaction, which does not exist yet).
- FactLog accepts a rotateBytes option so tests exercise real rotation.
2026-07-15 12:44:52 -07:00
352e356fd5 feat: provider access to the fact log + shared stamp verifier via internals
Three additive surfaces for native index providers, which hold only
`storage` and must never construct their own fact-log reader (the log's
open path is writer-side — it reconciles by truncating/rewriting):

- Fact-scan capability on the storage adapter (the getBinaryBlobPath
  pattern): the host brain wires a closure over its LIVE fact log at
  init; providers call storage.scanFacts()/factLogHeadGeneration()/
  factSegmentPaths() and fall back to the enumeration walk on null.
  Restore/reopen swaps the underlying log transparently.
- The family-stamp trio (readFamilyStamp/writeFamilyStamp/
  verifyFamilyStamp + types) exported from @soulcraft/brainy/internals,
  so 'one verifier' is literally one function shared with the native
  side, never two synchronized copies.
- Rollup invariants widened to number|string: content fingerprints
  (e.g. a per-tree SHA-256) are valid invariant values; strict equality
  either way, and a type mismatch reads as incoherence, never a pass.
2026-07-15 12:36:27 -07:00
2888ae6b40 feat: entity-tree family stamp — sourceGeneration + rollup coherence at open
The canonical entity tree now carries a FAMILY STAMP
(_system/family-stamps/entity-tree.json, JSON — forensics stay
terminal-readable): which committed generation the tree reflects
(sourceGeneration) plus the rollup invariants (entity/relationship
counts) that verify a millions-of-files projection whole where per-file
checks cannot scale. Written at flush/close boundaries; open-time
coherence is a COMPARISON, not a walk:

- coherent / absent (legacy store) → silent
- behind → benign for the tree (it is written BY the commit; only the
  stamp is stale after a crash between commit and flush) — refreshes at
  the next flush
- incoherent (counts diverged at equal generation, or a stamp AHEAD of
  the log head) → loud, names the failing invariant; repairIndex()'s
  unconditional recount heals and RE-STAMPS so repair leaves a coherent
  stamp behind
- a fault reading the stamp is UNVERIFIABLE — never conflated with
  absence

One verifier (verifyFamilyStamp, exported) reads both member modes:
enumerated (exact byte size per member, bounded families) and rollup
(invariants, unbounded families). New exports: readFamilyStamp,
verifyFamilyStamp, ENTITY_TREE_STAMP_PATH, FamilyStamp, StampMembers,
StampVerdict.
2026-07-15 10:54:20 -07:00
38b0041464 feat: generation fact log — after-image commit records, dual-written at every commit point
Every committed generation now also appends a FACT — an after-image
commit record (what each touched entity/relationship became, or a
body-less tombstone for a removal) — to an append-only, crc32c-framed
segment log under _generations/facts/. The before-image history and the
canonical tree remain authoritative; the fact log gives consumers ONE
sequential, self-verifying stream (index heals, incremental replays)
in place of a per-entity directory walk.

- Wire format: positional msgpack facts [generation, timestamp, ops,
  meta, blobHashes]; op = [kind u8, id bin16, record | nil tombstone];
  32-byte segment header (magic, formatVersion, firstGeneration,
  zeroed+verified reserved); length+crc32c frame per fact; zero-padded
  segment names so lexicographic order == generation order; JSON
  manifest with an atomic rename flip, manifest-first rotation.
- Commit protocol: facts append+fsync BEFORE the commit point inside
  the existing durability window, so a crash can only leave the log
  AHEAD of committed truth — open() truncates back (torn tails detected
  by CRC). Absent generation = never committed; a scan can never see an
  uncommitted fact. transact() facts are durable-on-return; single-op
  facts ride the group-commit flush exactly like buffered history. A
  fact-append failure fails the write, loudly — a silent gap would be a
  lie a later replay discovers.
- New public surface: brain.scanFacts() (sequential batches with heal
  telemetry: head/segments/approx up front, per-batch generation range
  + bytes + segment id, loud abort on gaps, summary cross-check) and
  brain.factSegmentPaths() (immutable sealed segments for zero-copy
  consumers; the mutable tail excluded). Exported types CommitFact,
  FactOp, FactScanBatch, FactScanHandle.
- Storage: optional binary raw-byte primitives (appendRawBytes,
  readRawBytes, writeRawBytes, rawByteSize) on StorageAdapter —
  feature-detected; filesystem + memory adapters implement them; an
  adapter without them hosts no fact log. Fact segments are byte-copied
  (never hard-linked) into snapshots. The _generations/facts/ namespace
  is registered as a protected family (rebuildable: false): no sweeper
  or GC may delete under it.
- New crc32c (Castagnoli) utility with RFC known-answer tests.
2026-07-15 10:49:02 -07:00
54c183668c fix: refuse writes when single-op history cannot be made durable
The async group-commit flush that persists single-op generation history
swallowed persist failures as a bare warn: writes kept succeeding while their
before-images piled up in memory, never durable and unbounded, with no signal.

The generation store now accounts for every failed flush at one place
(flushPendingSingleOps), tolerates a transient blip (retry with capped
exponential backoff), and after PENDING_FLUSH_FAILURE_THRESHOLD consecutive
failures LATCHES a durability failure and refuses further single-op and transact
writes with a typed, exported PendingFlushDurabilityError — rather than promise a
durability it cannot deliver. Live canonical data is untouched; only the
immutable history is stuck. The latch self-heals: the moment a flush succeeds
(a retry, or an explicit flush()/close()) it lifts and writes resume.

Loud errors, never quiet losses.
2026-07-13 09:31:25 -07:00
711d2f046a fix: honest response when a transaction rollback cannot complete
When a transaction failed and its rollback ALSO failed to undo a canonical
write (retries exhausted), the old path logged, continued, threw
TransactionRollbackError, and set state='rolled_back' — while the record it
could not undo stayed durable on disk. The caller got an error implying the
write was undone; a read-back showed the record. A failed rollback had no
truthful response (the post-commit response lie).

Give a failed rollback a two-branch honest contract, decided by observation:
both commit paths already hold byte-identical before-images, so after a failed
rollback the store compares current canonical state to them and classifies each
touched record as reconciled, an additive orphan (present when it should be
gone), or a restorative loss (gone/wrong when it should have been restored).

- Adopt-forward: a single-op write whose only damage is a durably-present
  orphan — the record the caller asked for — is committed forward (its
  generation buffered) and returns success with a loud warning that the derived
  index may be incomplete for that id until the next rebuild/repairIndex(). No
  error, no double-write; the record is durable and get-able immediately.
- Fail loud + quarantine: a multi-op batch, or ANY restorative loss, throws the
  new StoreInconsistentError naming every unreconciled record and its
  disposition, and puts the brain into write-quarantine (reads keep working,
  writes refused via assertWritable) until repairIndex() reconciles the derived
  indexes against canonical and lifts it. The counter is not advanced, and
  Transaction.rollback now reports state 'inconsistent' instead of the
  'rolled_back' lie when any undo failed.

New: StoreInconsistentError + UnreconciledRecord exported from the root;
repairIndex() forces a rebuild and clears the quarantine. Regression
tests/integration/rollback-trapdoor.test.ts injects index-add-throws +
canonical-delete-undo-fails and pins adopt-forward (durable, get-able, not
quarantined), fail-loud (StoreInconsistentError + quarantine + reads work +
repairIndex lifts it), and the error's record naming.
2026-07-12 12:19:09 -07:00
3b8fa51161 fix: transact durability barrier — committed transactions are durable on return
A committed transact() reported success while its canonical entity writes were
still only in the OS page cache (tmp+rename, not fsync'd), even though the
generation counter and manifest were fsync'd. A hard kill in that window could
leave the durable counter ahead of the persisted entity bytes — phantom
progress for any generation-based consumer resuming from the counter. Reported
from a downstream migration's crash-lifecycle forensics.

Add an optional transaction durability barrier to GenerationStorage
(beginWriteBarrier / flushWriteBarrier). FileSystemStorage implements it:
writeObjectToPath records each successful canonical write and
deleteObjectFromPath records each delete's parent dir, between begin and flush;
flush fsyncs every recorded write (contents + rename dir entries, via
syncRawObjects) and the parent dir of every delete. commitTransaction opens the
barrier before running the planned operations and flushes it after, BEFORE
persisting the counter and manifest — so the batch's entire canonical footprint
is durable before the generation stamp advances. The barrier is optional: the
generation store calls it through optional chaining, so in-memory and
durable-per-call (cloud object-PUT) adapters treat it as a no-op.

The single-op group-commit path is unchanged (deferred durability is the
Model-B design that avoids a 3-5x per-write fsync regression), but its
durability contract is now documented explicitly on commitSingleOp: transact =
durable on return; single-op = durable at the next flush()/close(), with the
counter buffered alongside the data so a crash loses both together (never a
torn counter-ahead-of-state store).

Regression (tests/integration/transact-durability-barrier.test.ts): the entity
writes fsync in an earlier syncRawObjects batch than the manifest for single-op
and multi-op (add+relate) transactions; a precommit-rejected batch opens no
barrier and advances nothing; MemoryStorage exposes no barrier (optional-chain
no-op).
2026-07-12 08:54:14 -07:00
a3467e1f9b feat: temporal VFS — file content joins the Model-B immutability model
The temporal model had a hole exactly where files were concerned: every
entity write is an immutable generation with before-images, but VFS content
BYTES lived under an eager refCount GC left over from the pre-8.0 design —
unlink could physically destroy bytes that in-window history still
referenced, and overwrite never released the old hash at all (an unbounded
silent leak whose accidental byproduct was the only thing "preserving"
history). Reading the past could therefore return a stale field, a dangling
hash, or nothing, depending on luck.

Fix: blob reclamation becomes a HISTORY decision instead of a LIVENESS
decision. Each blob's metadata now carries historyRefCount alongside the
live refCount:

- The commit seam counts one history reference per persisted before-image
  record carrying a content hash (commitTransaction staging and the
  group-commit flush), recorded BEFORE the record-set persists and carried
  in the generation delta (blobHashes — always present on new deltas, so
  compaction only falls back to reading records for pre-contract
  generations). An aborted transaction compensates best-effort.
- unlink/rmdir/overwrite drop ONLY the live reference (BlobStorage.delete →
  release; overwrite finally releases the superseded hash — cancelling the
  dedup increment on same-content rewrites and closing the leak), and only
  AFTER the canonical mutation commits, so a failed delete can never leave a
  live file whose bytes compaction might reclaim.
- History compaction is the ONE reclamation point: after deleting a
  generation's record-set it releases that set's references and physically
  reclaims any hash at zero live AND zero history references. Pins are
  exempt automatically. Crash ordering is over-count-only in every path
  (record before persist, release after delete), so a crash can leak until
  the scrub recounts but can never reclaim bytes a retained generation
  needs. scrubBlobHistoryRefCounts() restores exactness; existing stores get
  a one-time marker-gated backfill on open, failing into leak-safe mode
  (reclamation disabled) rather than guessing.

On top of the protected history, the temporal API the generational model
always implied:

- vfs.readFile(path, { asOf }) — the exact bytes as of a generation or Date,
  materialized from the history (pinned view released so compaction is
  never blocked by a read).
- vfs.history(path) — FileVersion[] ascending ({ generation, timestamp,
  hash, size, mimeType? }), the newest entry being the live state.
- Overwrites now refresh the file entity's data/embedding text — semantic
  search and the data field previously served the FIRST version's text
  forever (the stale-field defect a consumer's incident recovery depended
  on by luck).

Integration suite (temporal-vfs.test.ts): per-version exact reads +
history listing, leak-fix + history protection on overwrite, rm keeps bytes
readable, compaction reclaims past-window bytes and preserves in-window
(including the cross-file dedup case where an old file's history and a
newer file's removal share one hash), data freshness, and scrub exactness.
2026-07-10 16:43:48 -07:00
9a3d1bd494 fix: ifRev CAS is atomic — the revision check now runs under the commit mutex
N concurrent update({ ifRev }) calls carrying the same expected revision all
fulfilled (zero RevisionConflictErrors, last-writer-wins) — the check ran
before the commit mutex, so interleaved callers all passed it before any apply
landed. Sequential calls conflicted correctly, which hid the race. A production
cutover rehearsal caught it: 8 parallel ifRev-guarded ledger writes all
"succeeded" and 7 were silently lost. Advisory locks built on exactly-one-winner
semantics could hand the same lock to two workers.

Fix: conditional commit. commitSingleOp and commitTransaction accept an
optional precommit(beforeImages) precondition, invoked under the commit mutex
against the just-read authoritative before-images and before anything is staged
or applied — the per-record analogue of ifAtGeneration, which always ran there.
A throw aborts the commit atomically (generation reservation returned, zero
staging I/O in the transaction path). The store stays domain-ignorant; update()
and transact() supply the ifRev predicate:

- update(): the planning-time check remains as a fast-fail (avoids embedding
  cost on an obviously stale expectation); the authoritative check re-verifies
  the before-image's _rev and re-stamps the update's _rev from it, so the
  counter is monotonic even for concurrent non-CAS updates (N plain updates
  advance _rev by N). CAS against a concurrently-removed entity now throws
  EntityNotFoundError instead of silently resurrecting it; plain updates keep
  their last-writer-wins re-create semantics.
- transact(): per-op ifRev expectations registered during planning
  (PlannedTransact.casUpdates) are re-verified in the batch's precommit; any
  conflict rejects the whole batch before staging. Multiple updates to one
  entity sequence through a running rev; ids the batch itself adds
  (PlannedTransact.createdNouns — add resets the rev baseline even on
  overwrite) keep their exact plan-time sequencing.

Regression suite (tests/integration/ifrev-concurrent-cas.test.ts): 8 parallel
same-rev updates → exactly 1 winner + 7 conflicts; same for transact batches;
_rev monotonicity; the documented read→CAS→retry ledger loop converging exactly
(8 workers, 8 decrements, 0 lost); sequential behavior unchanged; forward-ref
add+update in one batch unchanged.
2026-07-08 14:53:34 -07:00
a859d6ecf8 perf(8.0): bound per-id generation history chains (O(W+L) resident, was O(N))
The MVCC time-travel layer kept nounChains/verbChains as unbounded
Map<id, number[]> — one resident chain per id ever touched across retained
history (O(N) RAM, defeating billion-scale time travel). Replace with a hot-tail
window + bounded cold LRU + a mutex-free bulk resolver, keeping resolveAt exactly
correct.

The most-recent W generations stay resident as full chains (the common recent-pin
read is O(log), zero scan); deeper pins reconstruct one id's chain on demand into
an L-bounded LRU. Reconstruction is LOCK-LIGHT — it holds no commit mutex, so a
historical read never stalls writers; correctness holds because a live pin's
answer is always > minPinnedGeneration, which compaction can never reclaim, and a
concurrently-reclaimed gen below that is skipped. materializeAtGeneration routes
through a new mutex-free resolveManyAt (one forward pass, O(R + |ids|)) — without
it a deep-pin materialize both regresses to O(N*R) and deadlocks on snapshotWith's
mutex. The cold cache is invalidated on re-touch to stay coherent. Resident RAM is
O(W*d + L), independent of N. 11-case test (oracle-vs-bruteforce, held-Db across
eviction + concurrent compaction, no-deadlock, write-path I/O-free); unit 1735 +
integration 613 (db-mvcc/db-temporal/db-asof green).
2026-06-30 10:30:17 -07:00
93f61dbc79 perf(8.0): represent the committed-generation ledger as an interval set
committedGens was a number[] with one element per committed generation. Every
single-op write reserves a distinct generation, so an insert-built 1B corpus
held a ~1B-element array resident regardless of provider — the MVCC sibling of
the storage-cache gate.

Replace it with a sorted disjoint interval set (committedRanges). With no
compaction gaps the whole ledger collapses to a single [start,end] pair, so
resident size is O(number-of-gaps) not O(writes). reservedGens becomes a
generator; point-resolution binary-searches the ranges; compaction trims the
oldest prefix with a defensive prefix-invariant guard. Behaviour is identical
across asOf/diff/since/history/transactionLog — unit 1718 + integration 607 +
the focused MVCC suite green.
2026-06-29 16:05:03 -07:00
ddcc0c723d refactor(8.0): remove the 4 deprecated query-operator aliases (clean break)
8.0 keeps the canonical operators (eq/ne/gt/gte/lt/lte) and their clean
long-form aliases (equals/notEquals/greaterThan/greaterThanOrEqual/lessThan/
lessThanOrEqual), and drops the four redundant deprecated spellings:
  is → eq,  isNot → ne,  greaterEqual → gte,  lessEqual → lte

Removed from every evaluator (metadataIndex criteria + range switches,
metadataFilter, the db whereMatcher egress path) and from the
BrainyFieldOperators type, the unsupported-operator error message, the docs
(QUERY_OPERATORS / api README / VFS projection + semantic guides), and the
whereMatcher alias tests. Also migrated Brainy's own internal use — the VFS
TemporalProjection queried with greaterEqual/lessEqual, which would have
silently broken — to gte/lte.

Full gate green: build, unit 1512, integration 607.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-06-29 10:29:20 -07:00
a52dba2168 refactor(8.0): API-surface + quality polish from the readiness audit
- find() search-mode: collapsed the two overlapping options to one canonical
  `searchMode: SearchMode` (the redundant `mode` alias was silently ignored on
  the primary find() path while honored on the historical path — a footgun) and
  removed the unwired `explain?` FindParams field (never read by find()).
- Documentation accuracy on the public type surface: entity ids documented as
  UUID v7 (auto) / v5 (natural key), not v4; dropped the stale "Brainy 3.0"
  banners and "backward compatibility" hedging on the fresh-8.0 Result type;
  documented the via/type alias; removed the dead GraphConstraints.bidirectional;
  fixed the no-op `EmbeddedGraphVerb = Omit<GraphVerb,'source'>` to omit the real
  sourceId; corrected the GraphIndexProvider.isInitialized JSDoc; documented
  removeMany's per-chunk generation granularity; JSDoc'd the public VFS surface.
- Honest perf comments in source: removed unmeasured billion-scale figures from
  the LSMTree / graphAdjacencyIndex headers (the JS fallback is in-memory after
  open; native is the scale path).
- Robustness: getVerbMetadata propagates read errors symmetrically with
  getNounMetadata; the find() egress integrity-guard keeps a row when the JS
  matcher doesn't implement an operator the provider already matched on; hardened
  the boundary-no-native CI guard to catch side-effect imports + re-exports.
- Tests: de-theatricalized a relateMany test to assert the real contract; fixed
  a stale Model-B header.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-06-29 10:04:19 -07:00
1c363e8c4b feat(8.0): asOf at-gen vector defer — provider-served historical semantic search (#35)
A filtered semantic read at a historical generation (db.asOf(g).find({ query, where }))
no longer unconditionally rebuilds an ephemeral JS-HNSW over every at-g vector
(O(n@G), the OOM ceiling the 2026-06-24 scaling audit flagged). When the vector
index is a VersionedIndexProvider that advertises isGenerationVisible(g), Brainy:
  1. resolves the at-g metadata∩graph universe from the record-overlay path (no
     materialization — it's the metadata-only historical find),
  2. routes the vector leg to the provider with { allowedIds, generation }, and
  3. composes the at-g entities ranked by the provider's at-g vector distance.
Without a versioned provider (the JS index, or a native one that refuses the
generation) it falls through to the existing materialization — unchanged.

- Seam (A): VectorIndexProvider.search gains an optional `generation?: bigint`
  ("omitted = now"), the vector mirror of the graph provider's trailing-gen + the
  #46 allowedIds field. JsHnswVectorIndex accepts and ignores it (no per-gen
  segments → refuse/fall-back posture; Brainy never routes a historical read there).
- Gate: Db.find tries the native at-gen vector path before materialize(); host
  exposes canServeVectorAtGeneration + vectorSearchAtGeneration.
- generation is Brainy's u64 commit counter — the same value handed to the graph
  index on writes (graphWriteGeneration), so it maps 1:1 to the native side.

Decided lockstep with the cor team (handoff #35 thread: (A) + vector-only). The
gen-g candidate-vector supply for cor's exact-rerank (part-3) is a separate,
non-blocking seam still being confirmed; the honesty guard keeps this path inactive
(falls through to materialize) until cor's native at-gen rerank is live.

Tested: provider routing + at-gen universe correctness (excludes future-born,
applies the filter) + page window via a mock versioned provider; seam-ignore on the
JS index; 38 db-mvcc/db-temporal historical-read tests green (materialize fallback).

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
2026-06-23 15:52:09 -07:00
5c3bb2c864 feat(8.0): Model-B per-write generation-stamping + adaptive retention knob
Every write — transact() AND single-op add/update/remove/relate — is now its
own immutable generation (Model-B), so a now() pin always freezes and
asOf/since/diff/history/transactionLog reflect single-ops exactly like
transacts. Closes the Model-A hole where pins did not freeze against single-op
writes.

Generation-stamping:
- GenerationStore.commitSingleOp: a one-operation commitTransaction with
  deferred durability. Wired into add/update/remove/relate/updateRelation/
  unrelate + removeMany (the *Many and VFS paths delegate to these).
- Async group-commit (flushPendingSingleOps): the live write is acknowledged
  immediately; its before-image is buffered in an in-memory pending tier that
  resolveAt/chains/changedBetween/tx-log read like on-disk generations, so the
  synchronous now() freezes with no forced flush. One fsync per window
  (triggers: size / 50ms timer / flush / close / transact / compactHistory).
- Crash recovery is drop-without-restore for group-commit generations (marked
  groupCommit:true): a crash mid-flush discards the partial generation and
  never restores its before-images, which would otherwise revert the
  already-acknowledged live write.
- Init-time infrastructure (the VFS root) is the un-versioned generation-0
  baseline: a fresh brain reports generation()===0 and an empty
  transactionLog(); the first user write is generation 1.
- Historical find()/related() overlay bound is the full reserved watermark
  (generation()), so un-flushed single-op writes are overlaid too.

Retention knob:
- config `history` -> `retention`: 'all' | 'adaptive' |
  { maxGenerations?, maxAge?, maxBytes?, budgetBytes?, autoCompact? }; unset ->
  adaptive (disk/RAM pressure, zero-config). CompactHistoryOptions floors ->
  caps (retainGenerations->maxGenerations, retainMs->maxAge, +maxBytes):
  reclaim oldest-unpinned while ANY cap is exceeded; pins always exempt.
- brain.setRetentionBudget(bytes) drives the adaptive byte budget at runtime
  (a coordinator's fair-share input). Per-generation bytes recorded in each
  delta enable historyBytes() introspection without a storage size API.

Tests: per-write generation resolution, pin freeze vs add/update/remove,
drop-without-restore corruption-trap (fault injector), clean-reopen replay,
maxBytes/maxAge/no-cap reclamation, retention-then-reopen. 107 db/generation/
temporal tests green, tsc clean. Docs (ADR-001, consistency-model, snapshots
guide, api reference, RELEASES) updated to per-write granularity + retention.
2026-06-22 15:19:58 -07:00
ceed70d7be perf(8.0): per-id history chains for O(log) historical reads + bounded delta cache
Historical reads (asOf/get) scanned the global committedGens list linearly,
making them O(database-age): a read of an unchanged entity at an old pin scaled
~12x for 10x history depth. Add per-id inverted history chains (nounChains/
verbChains) so resolveAt binary-searches the id's own generation chain instead —
O(log) and flat with depth. Chains build lazily under the commit mutex,
maintain incrementally on commit, and invalidate on compaction.

Also bound deltaCache (LRU cap 4096; getDelta re-reads evicted deltas) so a
long-lived high-write process's heap is O(cap) not O(generations) on the
disk-backed path, and binary-search commitTimestampAtOrBefore (O(log)).

Verified: 373 unit tests green; new tests/unit/db/generation-chain.test.ts
covers chain resolution, eviction re-read, and chain rebuild after compaction.
2026-06-22 13:47:33 -07:00
d4de48d004 feat(8.0): related({ node }) — one-call both-direction incident edges
related({ from }) / related({ to }) each return one direction; related({ node })
unions both (every edge where the node is source OR target), deduped, in a single
O(degree) call — the indexed equivalent of merging two related() calls by hand.
The 'all edges on a noun' query the graph-viz path needs.

- RelatedParams.node: mutually exclusive with from/to (throws if combined);
  composes with type/subtype/visibility filters; natural-key ids resolved.
- Implemented as a parallel out-edge (sourceId) + in-edge (targetId) fetch through
  the O(degree) graph-index fast paths, merged + deduped by id (a self-loop appears
  once), sorted for a stable page. Full incidence is the intended O(degree) cost;
  deep offset paging of a very-high-degree node is best-effort (use the native
  edgesForNode / a graph cursor for exhaustive paging).
- db.related() parity: node resolved + honored in relationMatchesParams (matches an
  edge incident in either direction) for the historical/overlay paths.

Test: related-node-bidirectional.test.ts — both directions, equals from∪to, self-loop
dedupe, type-filter composition, default-hides-internal, node+from/to throws.
2026-06-21 08:43:55 -07:00
4cc2088aed feat(8.0): upsert + FindParams.includeVectors + removeMany adaptive chunking
Three additive ergonomics from the API-simplification audit (no behavior change
to existing call sites):

- AddParams.upsert: create-or-update in one call. With a custom id, an existing
  entity is MERGED via the update path (merges metadata, re-embeds changed data,
  bumps _rev, PRESERVES createdAt) instead of the destructive full overwrite a
  plain add() does. Mutually exclusive with ifAbsent (throws if both set);
  ignored when no id is supplied. Wired into add(), addMany (per-item flag
  propagation), and the transact add op (routes to planTxUpdate). Kills the
  get()-then-add() round-trip for idempotent writes.
- FindParams.includeVectors: mirror of GetOptions.includeVectors — find() returns
  stored vectors when set; default stays empty (the perf contract is preserved).
  Honored on both the query and metadata-only where paths, and in db.find().
- removeMany adaptive chunking: replaced the hardcoded chunkSize=10 with
  params.chunkSize ?? storageConfig.maxBatchSize, matching addMany/relateMany —
  one storage-adaptive batch policy across all *Many methods (no thrash on
  high-latency backends).

Tests: tests/unit/brainy/upsert.test.ts (insert/merge/createdAt-preserved/
re-embed/ifAbsent-conflict/no-id/addMany/transact), find-include-vectors.test.ts
(true/default/where-path), batch-operations.test.ts (removeMany >10 items).
2026-06-20 16:34:20 -07:00
d02e522a3e feat(8.0): id-normalization (#18) + aggregation min/max delete-safety + RC-safe release
- id-normalization (#18): `brain.newId()` (UUID v7) + v7 default ids; non-UUID string ids are
  transparently normalized to a stable UUID v5 on creation AND every lookup — get/update/remove,
  relate(from,to), related, find({connected}), getMany, removeMany, the transact op-handler, and
  db.with() overlays — with the caller's original key preserved under `_originalId`. The engine only
  ever sees a UUID; real UUIDs pass through untouched. universal/uuid.ts gains v5/v7/isUUID +
  BRAINY_ID_NAMESPACE; new utils/idNormalization.ts (coerceNewEntityId / resolveEntityId).
- aggregation min/max delete-safety: `queryAggregate` no longer leaves a stale min/max after
  deleting the current extreme — min/max now track a value multiset and recompute in-memory (no
  entity scan; that scan was the prior delete-then-hang a consumer reported). Other metrics were
  already exact across deletes. Regression test proves resolve-after-delete + correct new min/max.
- release.sh RC-safe: explicit version arg, prerelease detection (npm `--tag rc` + GitHub
  `--prerelease`), full `test:ci` gate (unit + integration), current-branch push, npm-access
  verification after publish.
- native-engine references point at `@soulcraft/cor` (8.0's partner) in user-facing strings/docs.

Unit 1461/0 · integration 599/0 · tsc clean.
2026-06-20 14:46:40 -07:00
606445cd61 feat(8.0): API simplification — remove neural()/Db.search, one storage path key, integration→0
8.0 RC cleanup toward "one place per thing, zero-config, no deprecation":

- Remove the `brain.neural()` clustering namespace (ImprovedNeuralAPI + the dead
  legacy NeuralAPI + the neural CLI + neural-only types). Similarity is `find({vector})`
  / `similar({to})`; attribute grouping is the aggregation `GROUP BY` engine. The separate
  entity-extraction / smart-import feature (NeuralImport, NeuralEntityExtractor, SmartExtractor,
  NaturalLanguageProcessor, `brain.extract()`/`brain.nlp()`) is kept.
- Remove `Db.search()`; `find()` is the one query verb (accepts a bare string or FindParams).
  Fix the bundled MCP client, which called a non-existent `brain.search(query, limit)` →
  now `find({ query, limit })`.
- Storage config: collapse to one canonical top-level `path` key. The pre-8.0 aliases
  (`rootDirectory`, `options.*`, `fileSystemStorage.*`) are removed and now THROW with the
  exact rename instead of silently defaulting to `./brainy-data` on upgrade. A single resolver
  feeds createStorage, the 7.x→8.0 migration probe, and the plugin-factory handoff, so a native
  storage provider resolves the identical root (no split-brain).
- Fix `similar({ threshold })`: the min-similarity filter was silently dropped; it is now
  applied as a post-filter on `result.score` (the documented way to bound semantic results).
- Fix `vfs.rename()` on a directory: child path updates spread the entity vector into `update()`
  and failed dimension validation; they are metadata-only updates now.
- Fix `vfs.move()`: copy+delete orphaned the content-addressed content blob (the destination
  shared the source hash, then unlink removed it). `move()` now delegates to `rename()` — an
  in-place path change that preserves the blob and the entity id, for files and directories.
- Fix streaming import: the bulk fast path never flushed mid-import nor signalled queryability.
  Entity writes are now chunked by a progressive flush interval (100 → 1000 → 5000); each chunk
  flushes and emits `progress.queryable`, so imported data is queryable during the import.
- Sweep all docs, comments, and JSDoc for the removed/changed APIs.

Integration suite: 49 files / 588 passed / 0 failed. Unit: 80 files / 1456 passed, no type errors.
2026-06-20 13:31:11 -07:00
2c84f86815 feat(8.0): temporal range verbs — diff, history, since(gen|Date), asOf{exclusive}, transactionLog window
asOf() answers "state AT a point"; these answer "what happened BETWEEN two
points" and "one entity's whole history", all on the existing generation records.

- Extract resolveAsOfGeneration() as the shared gen|Date→{generation,timestamp}
  chokepoint (reachability + Date semantics identical everywhere). asOf()'s
  inclusive path is byte-identical — db-mvcc still 25/25.
- asOf(target, { exclusive }) — strict-before (resolved−1, clamped at gen 0,
  never a RangeError).
- db.since(Db | generation | Date) — overload; number/Date resolve via the shared
  resolver (new DbHost.resolveGeneration); EXCLUSIVE lower bound;
  since(db) === since(db.generation). Same-store guard via Db.belongsToStore.
- brain.diff(a, b) → { added, removed, modified } split by nouns/verbs. EARNS its
  name: candidate set is ONLY changedBetween(gLow,gHigh), each classified by
  existence at both endpoints + a key-order-insensitive value compare
  (new src/db/stableEqual.ts) — a touched-but-reverted / born-and-died id is in
  no bucket.
- brain.history(id, { from, to }) → every distinct version oldest→newest, each
  value === asOf(version.generation).get(id); null = removal; kind auto-detected
  (throws on UUID-space collision). New store helper generationsTouching().
- brain.transactionLog({ from, to, limit }) — INCLUSIVE generation/Date window
  (contrast since's exclusive lower bound); limit applied last.
- Compaction policy locked: diff/since THROW GenerationCompactedError below the
  horizon; history TRUNCATES to it.

Types DiffResult/HistoryVersion/EntityHistory exported from the package root.
Tests: tests/integration/db-temporal.test.ts (8 proofs incl. diff-earns-its-name,
history↔asOf cross-check, the composition proof, granularity, compaction contrast)
+ tests/unit/db/stableEqual.test.ts (6). docs/guides/snapshots-and-time-travel.md
+ RELEASES updated. 1477 unit + db-temporal 8 + db-mvcc 25 green.
2026-06-19 13:21:02 -07:00
373a48122d refactor(8.0): rename BackupData → PortableGraph (the type is interchange, not a backup)
The export()/import() document type was named BackupData, but it is not a backup:
it is the portable, versioned, partial-or-whole interchange representation of a
graph (entities + relations + optional vectors/blobs) — the unit Brainy exports
for transport between instances, versions, and products, and the payload other
artifacts embed. The actual backup is persist()/load() (the native whole-brain,
generation-preserving snapshot), so "Backup*" actively collided with that concept.

Rename every developer-visible symbol, file, doc, JSDoc and comment:
- BackupData→PortableGraph, BackupEntity→PortableGraphEntity,
  BackupRelation→PortableGraphRelation, BackupReader/Writer→PortableGraphReader/Writer,
  BackupValidation→PortableGraphValidation, isBackupData→isPortableGraph,
  validateBackup→validatePortableGraph, BACKUP_FORMAT[_VERSION]→PORTABLE_GRAPH_FORMAT[_VERSION].
- src/db/backup.ts → src/db/portableGraph.ts; test → db-portable-graph.test.ts.
- Guide, api/README, RELEASES updated.

The on-the-wire `format` tag is renamed 'brainy-backup' → 'brainy-portable-graph':
the format was introduced in 7.32.0 and has not been adopted by any consumer, so
there are no stored documents to stay compatible with — a clean rename beats
carrying a legacy tag. No deprecated aliases (nothing to alias). 7.x shipped the
same rename as 7.32.2.

1471 unit green; build clean; db-portable-graph.test.ts 17/17.
2026-06-19 12:37:23 -07:00