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5e720d17ae fix(find): orderBy is the order on every path, not only the metadata-only one
`find({ where, orderBy })` answered in field order; `find({ query, where,
orderBy })` and `find({ vector, where, orderBy })` answered in SCORE order.
The vector/filter block ranks the fused candidates by score, cuts the page and
returns early — and the tail's orderBy sort sits below that early return, so on
those paths it never ran. Nothing threw and nothing warned: the ordering request
was dropped in silence, and the two paths disagreed about what "ordered by rank"
means.

Where `connected` or `fusion` kept the tail alive the defect changed shape
rather than disappearing. The block had already CUT the page by score, so the
tail ordered the rows relevance had chosen — a correctly sorted page of the
wrong rows.

The early cut fires only once the candidate set reaches offset+limit rows, which
is why it read green for so long: below that threshold the block falls through
and the tail's sort does apply. An ordering that is correct until there is
enough data to matter.

THE LAW: an explicit orderBy displaces score as the ordering key on every path.
The candidate set the path produced is ordered IN FULL and the page is cut from
that ordering — "page last", the graph-first law applied to ordering rather than
to filtering. Score-ranked early paging stays exactly as it was for the default
case, where score IS the requested order.

The pin is differential against the metadata-only path, the one path that always
honoured orderBy. It is sized so the hybrid legs (each bounded at limit*2)
provably cover the filter universe, and that covering is asserted from the leg's
own output rather than assumed — orderBy orders the candidate set, it does not
enlarge it, and the pin claims nothing about recall.
2026-09-02 14:19:24 -07:00
be77a10bfe fix(find): the projection seam is ES-private, and document the projection
TypeScript's `private` is compile-time only, so the seam's helpers were real
prototype methods and the generated contract manifest listed them as public
DOORS — which would have obliged every other engine to implement an internal
detail. They are `#`-private now and the manifest is unchanged by this branch.

Found while checking that: docs/api-contract.json was ALREADY stale at v10.4.11
— promoteQueuedFlush and startFlushLeader are in src and absent from the
manifest, so they leaked the same way and were never re-emitted. Left alone
here rather than folded into this branch; it is someone's to fix deliberately,
and the fix is the same # conversion.

docs/FIND_SYSTEM.md gains the projection: the rules, why a missing field is
absent rather than an error, where the values come from and what a field the
column cannot serve costs.
2026-09-02 14:19:10 -07:00
ad0f493f7a feat(find): field projection — fields resolve from the column store, not the record
A list view that shows a title and a slug hydrates the whole record for every
row, document bodies included, and discards almost all of it. find/get({ fields })
names what is wanted; the column store serves it; the canonical record is opened
only for fields the index cannot supply.

The provider grows an optional getScalarsForIds(ids, fields) door, batched: it
walks each column ONCE and picks out every requested id, rather than re-walking
per row. The column store grows the primitive that was missing — valuesForIds —
because every other read door there answers which entities have a value, and a
projection asks the opposite.

It reads the COLUMN store, never the sparse index: the column keeps raw values,
the sparse index keeps a bucketed form built for range queries, and a projection
served from the latter would return a value that differs from the record's. A
field the column cannot serve is omitted rather than approximated — omission
costs a read, a wrong value is a wrong answer nobody can see.

Two laws the pins hold: fields absent is byte-identical to today, and a missing
field is simply absent rather than an error — so this path deliberately avoids
the strict address resolver, whose UnresolvableFieldError is right for orderBy
and wrong here.

related() takes no fields: a Relation carries from/to as ids and hydrates no
record, so the param would be decorative.
2026-09-02 14:19:10 -07:00
6baa4d7f6c fix(shutdown): beforeExit never closes a live brain — a drained event loop is not a shutdown
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10.4.11 gave shutdown one owner and one path — close() — and wired all three
process listeners to it. That is right for SIGTERM and SIGINT. It is wrong for
'beforeExit', which Node emits whenever the event loop has no REF'd work left:
not when the process is ending, and with no signal involved. A healthy script
reaches that state routinely, because this engine unref's its idle and cadence
timers ("an idle brain costs nothing"), so a script awaiting anything those
timers drive is, for that instant, a process with no ref'd work and an open
brain.

MEASURED on the 11.1 rehearsal lane against a copy of a real store: after the
heal phase the log printed "Shutdown signal received - flushing pending
data..." and "Flushed successfully (1 instance)" with no signal ever sent, and
the script's very next add() threw "Brainy instance is not initialized: it was
closed via close(). Create a new instance." The engine had closed a live brain
out from under a running script.

The beforeExit listener now runs its own pass, which closes nothing,
deregisters nothing, releases no writer lock, and never force-exits: it runs
flush() — the engine's own non-closing durability door — on each live brain and
leaves every one of them open and usable. flush() persists derived state only
(count ledger, projections, generation counter, aggregation, entity-tree
stamp); the clean-shutdown marker is generationStore.close()'s word about
itself, reached only from close(). Running it concurrently with live writes is
the engine's ordinary steady state — noteWriteForPersistence() kicks the same
call off an unref'd timer on every busy brain — and it is single-flight, so
there is no new race. A throw is reported per instance and the pass continues:
canonical data is durable at ack via the fact log, so a failed derived-state
flush costs the next open a rebuild, never the caller their brain.

The listener is no longer self-deregistered. It does not need to be: a flush on
a clean brain schedules no I/O, so the emit after it does no event-loop work
and the process exits on its own. A one-shot listener spent on a spurious
mid-script drain would leave the genuine end-of-script drain with nothing. The
drained-loop notice is printed once per registration cycle, because a
console.log to a pipe is itself event-loop work.

exitIfSoleShutdownOwner() stays on the signal path alone, and its contract now
says so: beforeExit suppresses no default behaviour, so exiting from it would
end a live script at code 0 mid-work.

THE NAMED TRADE: a script that opens a brain and never closes it now exits with
its writer lock still on disk and no clean-shutdown marker, so its next open
overwrites a stale lock and folds the log. That is the honest cost of never
closing, and the narration names the cure. Closing a live brain to avoid it was
the worse half of the trade.

Pins: tests/integration/beforeexit-never-closes.test.ts — a script that drains
the loop with a brain open keeps a working brain (add + find succeed, the lock
is still held, the process still exits 0), the pass flushed and wrote neither
of close()'s markers, and repeated drains are idempotent. Both cases fail on
10.4.11's handler with the exact production shape ("add() after the drain
failed", "pass 1 closed the brain"). Re-run green: shutdown-single-owner,
writer-lock-clean-close, idle-costs-nothing, shutdown-hooks-lifecycle.

docs/concepts/multi-process.md no longer claims beforeExit releases the lock.
2026-09-02 14:18:19 -07:00
dea3ec2031 fix(flush): the gate settles its waiter from the machine, never from a chain
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The single-flight gate queued its follow-up as
`leader.catch().then(() => this.flush())`. That waiter is settled ONLY by
resolving the very promise the leader is being awaited through, so the moment
anything inside a flush body awaits flush(), the promise graph closes on itself
and nobody resolves — an unbounded hang, not a slow flush, presenting exactly
like a bulk write timing out. No current call site awaits a flush from inside
one, so this is a latent cycle rather than an observed one; the gate should not
depend on that staying true.

The queue is now a bare deferred. The leader's finally opens the gate and
PROMOTES the waiter to a new leader, settling the deferred from that run; the
finally returns nothing, so the leader never awaits its own follower. Every
exit runs the same promotion — the leader resolving, the leader rejecting, the
promoted run rejecting — so a queued caller is settled exactly once on every
path, and a synchronous failure starting the promoted run is reported to the
waiter instead of thrown into the leader's finally. close() drains both handles.

tests/unit/brainy/flush-single-flight.test.ts pins the invariant on each path
that must settle a waiter: many callers during one flush all resolve within a
bound (one body, one follow-up, peak concurrency 1); a REJECTING leader still
runs and settles the queued waiter; a rejecting follow-up settles its waiter
and leaves the gate open; and the leader returns without waiting for a
deliberately slower follower.
2026-09-02 12:33:59 -07:00
367ca721a5 fix(close): a read-only brain writes no clean-shutdown evidence — the marker is the writer's word about itself
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2026-09-02 10:59:29 -07:00
ec644bde56 fix(shutdown): one owner per brain — the signal handler defers to close(), and flush is single-flight
MEASURED IN PRODUCTION. A host that owns its own shutdown — one SIGTERM
listener calling close() on every pooled store — ran head-on into the engine's
own signal handler, which iterated every live instance, flushed its components
in parallel, and released its writer lock in its own finally. Two teardowns of
the same brain at the same moment: "Shutdown signal received - flushing pending
data...", 148s of silence, "Flushed successfully (1 instance)", and the host's
pool close of that same store returning 1s later — 149s against 24s for the six
stores with no engine work in flight. The same race reproduced locally as
"Failed to flush one Brainy instance on shutdown: Writer fence lost … the lock
file is gone": the handler observing a lock the close it was racing had already
released.

Three changes, one law — a brain's teardown belongs to whoever started it.

1. close() is idempotent and re-entrant. The first call stores its promise
   synchronously in _closeInFlight and every later or concurrent caller gets
   that same promise back; the teardown runs once. close() is no longer async
   so the promise is shared by identity, not just outcome. The state is
   observable: isClosing (begun) and isClosed (finished).

2. The signal handler defers one macrotask, then per instance either steps
   aside (a close has begun or finished — its owner owns the flush, the markers
   and the lock) or awaits instance.close(): the same settle/flush/attest/
   marker/lock path any caller gets. Its old parallel per-component flush and
   separate lock release are gone; the three laws that block carried are each
   satisfied by close(), verified line by line and recorded in the new comment.
   Per-instance isolation stays here, in the loop's try/catch.

   Sole-owner exit now reads the listener count WHEN THE SIGNAL ARRIVES.
   Asking afterwards reads a process that has already torn itself down —
   closing the last brain deregisters the engine's own listeners, so a host's
   single remaining listener would look like "<= 1" and be force-exited out of
   its own graceful shutdown.

3. Flush is single-flight with a queue one deep. It did not coalesce: the
   cadence's guard covered only the flushes the cadence started, so a
   cross-process flush request or an application flush() overlapped it freely —
   production showed two "Flushing Brainy indexes…" runs 3s apart, walls
   growing 295ms to 4.9s. The gate now lives in flush() itself and covers every
   caller: run, or join the ONE queued follow-up. A follow-up rather than
   joining the running flush, because a caller flushes to make ITS writes
   durable and those may have landed after the running flush read its state; it
   costs nothing when there is nothing new. close() drains that chain too.

The idle law is untouched: a clean brain's flush still returns immediately, and
an idle brain still flushes zero times.
2026-09-02 10:55:09 -07:00
15d4f65dcf perf(open): the pending-embed fold is bounded by a checkpoint of the SET, not an empty-only mark
The low-water mark shipped in 10.4.9 can only be written when the pending
set is EMPTY, because it carries no set — it means "everything at or below
G is consumed". A brain holding even one id that never lands (an embed that
keeps failing, a data-less row reaped in memory only and re-folded every
open) never drains, so it never writes a mark, so the bound never engaged on
exactly the brains whose fold is expensive: `recover-pending-embeds` re-read
the WHOLE fact log at every open, on the open's foreground.

_system/pending_embeds_checkpoint.json carries the set: { generation,
pending, writtenAt } = "as of durable generation G the pending set was
exactly this list". Open seeds the set from the list and scans from G + 1,
so the fold is O(facts since G) whether or not the set ever drains. Measured
on a 301-row brain with one stuck id: 302 facts read before, 0 after; at 601
rows, 602 before, 0 after — same pending set both ways.

THE DURABILITY LAW, by construction. A checkpoint at head H taken while the
facts up to H are still buffered would be read back after a crash that
truncated the tail: an `embed.landed` in a truncated fact would be gone from
the log while the checkpoint still recorded its id as landed, and its
landing vector went with the fact — a LOST VECTOR. So a capture is refused
unless `0 < head <= committed`, the manifest watermark below which
FactLog.open() never truncates and which the group-commit flush only
advances after fsyncing the log. The (generation, set) pair is taken in one
synchronous instant with no await between reading the generations and
snapshotting the set. The one remaining asymmetry runs the safe way: an id
enqueued in memory whose marker lands at G+1 is captured as pending at G —
one idempotent re-embed, never a loss.

Written at clean close (inside closeDurableSteps, after the generation
store's own close flushed the log and advanced the manifest), at
drain-to-empty, and on a cadence of max(64, ceil(|pending| / 64))
transitions while open — an interval that holds the mechanism's amortized
cost at <= 64 ids written per transition however large the backlog grows, so
the cure cannot reintroduce the defect class it fixes. No timer, no knob.
The debt stays armed across attempts the durability law refuses, so a write
burst does not skip a checkpoint, it defers it.

Degradation is loud and always toward a LONGER scan: a torn checkpoint
throws typed on read (the adapter's tmp+rename write means it can never
parse into a partial list) and a malformed one is refused whole, both
falling back to the low-water mark — still written, still read — and then to
generation 1. The fold narrates which bound applied and how many facts it
read, on every open, so a bound that stops engaging is visible instead of
silent.

The worker's orphan reap splits: a row that is GONE clears durably (its
tombstone is in the log, or its create never was), while a present-but
data-less row keeps clearing in memory only and is carried in the checkpoint
list, so the bounded fold and a full fold from generation 1 agree exactly.
The crash-recovery contract is unchanged: the fold stays on the open's
foreground, markers re-armed when open() returns.
2026-09-02 10:20:38 -07:00
905c267c47 fix(find): a page the metadata block already cut is not cut again
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`find({ query, connected, where, offset })` answered [] for every page but the
first. The metadata block ranks the fused candidates and CUTS the page itself
— rows [offset, offset+limit) — and then returns early. Two shapes do not take
that early return, `connected` and `fusion`, and they fell through to the tail,
which sliced the already-cut page by `offset` a second time: a five-row page
sliced at offset five is nothing at all. Every page after the first was empty,
and the caller had no way to tell that from "no more rows".

The block now records that it consumed the offset, and the tail returns the
page it was handed instead of re-cutting it. Nothing changes at offset 0, where
the second slice was the identity.

Pinned in tests/integration/find-hybrid-filter-before-hydrate.test.ts: page two
of a `connected` hybrid find matches the pipeline oracle row for row, paging
reaches every matching neighbour exactly once, and a `fusion` find's second
page is the same page the plain find returns.
2026-09-02 09:37:27 -07:00
b1c7054467 fix(find): the hybrid legs rank inside the filter, and only the page is read
A hybrid find fuses a text leg and a semantic leg. The semantic leg already
walked only the metadata filter's universe. The text leg did not: it ranked
the WHOLE store, took the top `limit * 4`, read every one of those rows from
canonical, and only then intersected with the filter. On a large store with a
selective filter that is hundreds of rows read to return a handful — and a row
matching both the query and the filter, but sitting outside the store-wide
text prefix, was silently dropped. The same defect `find({ connected })`
carried before the graph-first law, one leg over.

Both legs now rank ids inside the universe and neither reads canonical. The
text leg goes through a new optional `getIdsForTextQueryWithin` door on
MetadataIndexProvider — the text twin of `filterIdsWithin`, so a native index
can intersect its postings before any string crosses the boundary; the
reference index implements it from its own posting-list merge, so the two
doors can never disagree, and a provider without it is served by the
whole-store answer intersected here. The fusion ranks shells, the page is cut
from them, and canonical is read once for exactly that page — with the row
rebuilt in full, so a hydrated row is indistinguishable from an eagerly-built
one (same flattened fields, same entity, same match visibility, same key
order). The eager forms of both legs stay for the search modes whose leg
output IS the answer.

Measured on the production recall shape (query + type list + `missing`
negation + excludeVFS, limit 60) the old order read 241 rows in two batches to
return one; the new order reads the page.

Pinned in tests/integration/find-hybrid-filter-before-hydrate.test.ts. The
oracle there is the pre-change pipeline itself, replayed on the same brain
through the same doors: where the filter does not truncate the text leg the
answer is identical — rows, order, scores, match visibility and row shape —
across hybrid + where, + type list + excludeVFS + a `missing` negation, +
connected, with and without offset. Where it does truncate, the correction is
held by name: the old order's text leg contributed nothing at all, the new one
returns the matching rows and paging reaches every one of them. The cost pins
read the engine's own counters: one batchGet of `limit` ids, the whole-store
text door never called, and what the text leg marshals bounded by the universe.
2026-09-02 09:37:27 -07:00
f763317af7 feat(engine): a protected factory for the generation store — a subclass may substitute one that keeps the contract
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2026-09-02 09:09:30 -07:00
a8c5fbf9dc fix(find): near() searches around the anchor's own vector, and refuses by name without one
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The proximity search fetched its anchor through get(), which omits vectors
by default, then handed a zero-length vector to the index — every
find({ near }) refused with a dimension mismatch, for every caller. Found
by the Rust planner's first-contact pins comparing outcomes with and
without the planner on a refused shape. The anchor is now fetched with its
vector, and an anchor that has none refuses by name — a proximity search
around an unvectored row has no meaning and must not fail inside the index.
Pinned in tests/integration/find-near.test.ts.
2026-09-02 08:43:39 -07:00
34f1886f7c Merge remote-tracking branches 'origin/fix/planner-provider-door' and 'origin/fix/containment-batching' into rel/10.4.10-candidate 2026-09-02 08:42:03 -07:00
2648f56ddf Merge branch 'fix/pending-embed-low-water' into rel/10.4.9-candidate
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2026-09-01 16:03:37 -07:00
8a2ebacf02 fix(open): pending-embed recovery keeps the crash-recovery contract — foreground, bounded by the mark
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The delta gate caught the backgrounded fold breaking six pinned
crash-recovery cases: a reopened brain must have its markers re-armed
when open() returns, and a background latch races every consumer of that
contract. The backgrounding is reverted; the low-water mark stays — it
is the part that kills the whole-history scan, and with it the
foreground fold costs the log's tail on any brain that has ever drained.
The unmarked first open after upgrade pays one full scan, once, and the
open narrates it as its own step.
2026-09-01 16:03:33 -07:00
4d5f823f47 feat(plugin): an optional planFindPage door — an index that can plan a find answers it in one call
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The provider's read doors each serve one stage, so a find that consults three of
them crosses into the index three times and marshals a result set at every
crossing: a filter matching a hundred thousand rows builds a hundred thousand id
strings to return a page of twenty-five. An index able to decide the stage order
itself can answer the page in one call and build ids only for the page.

planFindPage is optional and additive, in the shape filterIdsWithin and
getIdSetForFilter already set. The hook sits above the branch selection, because
the branches are what decide stage order per call site and an index that plans
has to be asked before that choice is made. Absent — as it is on this engine's
own index — every find is served by the stage doors exactly as before, which is
what keeps this engine the ordering oracle for any index that implements one.

The contract the door must keep, written where an implementer will read it:
identical rows in identical order to what the stage doors would produce; the
graph-first law (neighbours are the candidate universe, the filter runs over
those ids, orderBy sorts the whole set, the page is cut last); null returned
BEFORE any work rather than instead of an answer; and emptyAt naming the stage
that produced an empty page, so the serving law is applied to the right index —
an empty graph answer is re-verified against the adjacency before it is
believed, and a filter-empty is not.

Pinned in tests/integration/find-planner-door.test.ts: absent changes nothing;
present it is asked first with normalized params, the hidden ids and the graph
provider; its page is used and hydrated in its order; a declining door leaves
the result identical to the no-door path; and the two emptyAt branches verify
the adjacency, or correctly do not.
2026-09-01 13:11:16 -07:00
d5147ed608 Merge branches 'fix/connected-find-order', 'fix/pending-embed-low-water' and 'fix/related-verb-array' into rel/10.4.9-candidate
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2026-09-01 12:38:00 -07:00
88e79729d3 perf(open): pending-embed recovery is bounded by a low-water mark and runs behind the doors
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The recovery fold scanned the generation log from generation 1 at every
open, on the open's foreground — O(whole history) on long-lived brains
(measured at two minutes of a large brain's open). Now an advisory mark
records the log's head whenever the pending set drains to empty (and at
clean close when empty); recovery scans from the mark + 1. The mark is
advisory and monotone-safe: stale-low costs a longer scan, never a
marker. The fold itself moves behind the doors as a latched background
task — the embed worker starts when it settles, and awaitPendingEmbeds()
and close() wait on the latch first, so no caller can observe a
half-recovered set. A pending embed's outcome was always eventual;
moving its recovery off the foreground changes when the worker starts,
never whether a marker is honored.

Pinned in tests/integration/pending-embed-low-water.test.ts: the drain
writes the mark and the next open scans from mark + 1; a pending embed
enqueued after the mark survives an unclean stop; open arms the fold as
a background latch the barrier waits on; a clean close writes the mark
even without a drain.
2026-09-01 12:17:55 -07:00
077cbc0b6f fix(find): connected finds are graph-first — neighbours, then the filter over those ids, then the page
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With `connected` present, find() materialized the whole-store filtered id
list, paged it, hydrated the page, and only then intersected with the
neighbour set. Every such call paid O(store) for the filter and the
hydration of rows that were never neighbours, and a neighbour outside the
first page of the filtered STORE was silently dropped — the answer depended
on the store's order and the page size.

The neighbour set is now the candidate universe: resolved first from the
adjacency, the metadata filter evaluated over those ids only through the
provider's own evaluation (a new optional `filterIdsWithin` door on
MetadataIndexProvider; the reference index implements it from its own
getIdsForFilter so the two can never disagree; a provider without it is
served by the whole-store answer intersected here), `orderBy` sorts the
whole neighbour set before the page is cut, and the vector leg walks the
neighbours as its candidate set. The text leg of a hybrid find keeps its
post-intersection — it has no candidate door.

Pinned in tests/integration/find-connected-order.test.ts: paging reaches
every matching neighbour and never a non-neighbour; a `missing` negation is
evaluated over the neighbours; the index is asked about the neighbour ids
only and hydration is one page; orderBy sorts the whole set; the vector leg
stays inside the neighbours; an edgeless anchor answers [] before the
filter is asked.
2026-09-01 11:29:44 -07:00
73500e7d10 fix(transact): metadata-index ops take their JSON-safe view at the crossing, not at construction
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transact()'s delete legs (direct unrelate and the noun-remove cascade) hand
the SAME verb object to the graph-retraction op and the metadata-retraction
op. The metadata leg sanitized at PLAN time, when the verb was still clean,
so the wrap returned the same reference — then the graph op's execute-time
endpoint resolution (deliberately deferred for same-batch forward refs)
mirrored BigInt sourceInt/targetInt onto the shared object, and the metadata
op crossed the seam with them. A strict provider rightly refuses that
crossing, so every transact-wrapped edge delete aborted; direct unrelate()
resolves ints at build time, before its sanitize, which is why no existing
gate saw it.

The JSON-safe view now lives in a shared leaf (utils/jsonSafeIndexMetadata)
and is applied INSIDE AddToMetadataIndexOperation and
RemoveFromMetadataIndexOperation at execute and rollback time — the one
place no plan-vs-execute ordering can bypass. Pins: the fleet repro, the
cascade shape, a mixed batch, and unit pins that mutate the entity after
construction against a strict seam (5 red before, 5 green after).
2026-08-31 12:59:40 -07:00
David Snelling
c99308710a fix(recovery): a torn generation-log tail is a terminal verdict, never a wait
Two halves of one defect, found by a seeded-SIGKILL crash lane.

THE FALSE POSITIVE. stampEntityTree() recorded generationStore.generation()
— the ALLOCATED counter, a number a write in flight has claimed and may
never commit — while the JSDoc beside it already said the source is the
committed generation. Every crash inside a write window therefore produced
a spurious verdict at the next open: either 'sourceGeneration N is ahead of
the log head N-1' (the allocated generation died with the process) or
'rollup invariant nounCount: stamped X, observed Y' (the recovery fold
folded facts the stamp's counts predate). Both told the operator to run
repairIndex() — a whole-store recount — for a store that was coherent.
Measured before this commit: 4 of 11 SIGKILL cycles on a healthy store
raised one of the two. The stamp and the open now both read
committedGeneration(), which is what every other open-time watermark in the
class already reasons about.

THE TERMINAL VERDICT. A stamp still ahead of committed truth after the
recovery fold witnesses a generation that is not in the log — the stamp's
fsync outlived the tail's, and there is nothing to arrive. That is its own
verdict state now ('torn'), never folded in with 'incoherent': the two have
opposite cures. A writer open demotes it — the unusable stamped surface is
re-derived at the committed generation from the live counters, O(1),
straight-line, no loop and no await on external progress, narrated with
both count sets, the stamp's path and its committedAt. A read-only open
cannot re-stamp, so it says so and names the cure instead of guessing, and
still serves. Neither branch waits, and neither locks an owner out of a
canonical tree the stamp only describes.

Pins: the verifier returns the torn verdict with both generations; a
fabricated head-behind-source store narrates precisely, demotes inside a
bounded open, serves its rows, and is quiet at the next open (the demotion
converges); a read-only open narrates the same verdict and leaves the bytes
untouched.

(cherry picked from commit 298cb6daca)
2026-08-31 10:47:08 -07:00
2cf3801007 feat(open): name the two steps that hold the vfs-bootstrap phase
MEASURED on a 14,056-noun / 72,679-verb production-shaped store, measured
solo under an exclusive lock: the vfs-bootstrap
phase costs 37.8s on main and 38.0s on this branch — unchanged — and NO
"vfs.init" step line was emitted at all, meaning the VFS's own init fell under
the 2s narration threshold. The phase is therefore almost entirely NOT the VFS,
and the old-root sweep this branch moved to the background was never what made
it expensive.

What else lives in that span is now named: the log-authority artifact read, the
adoption ORACLE (which verifies the log against canonical before flipping a
brain to durable-at-ack), the legacy pending-embed sidecar bridge, and the
pending-embed recovery fold. One of those holds ~38 seconds of every open of
this store and the next measurement will say which, by name, instead of leaving
a phase label to be guessed at.
2026-08-28 11:56:26 -07:00
fb1da1c56d perf(idle): the flush-request watch is event-driven; the heartbeat is observability
Three idle-burn items from the steady-state audit, and one correction.

THE FLUSH-REQUEST WATCH (the strongest of them). It readdir'd the request
directory every 500 ms, per brain, for the life of every writer — armed on
every non-reader brain whether or not any inspector process existed. In a process holding many stores that is tens of directory reads per second
on a completely idle service, plus a stale-request GC on every one of them. It now
uses fs.watch, so the arrival itself wakes it and a request is seen SOONER
than the poll saw it. Two concessions ride along, both stated in the code: a
30s safety sweep (fs.watch drops events on some network and fuse filesystems,
and the GC needs a tick of its own — two orders of magnitude fewer reads than
the poll made), and a fall back to the original 500 ms poll, narrated, on a
filesystem that cannot watch at all, because an inspector whose request is
never seen waits forever.

THE WRITER HEARTBEAT goes 10s → 60s. It is observability ONLY — staleness is
decided by pid liveness and the fence compares pid + hostname, so no decision
anywhere reads the timestamp — and at 10s it was a lock-file write every ten
seconds per brain forever, for a value nothing computes with. An operator
still sees a heartbeat inside the minute.

THE HEALTH NARRATION dedupes by CONTENT, not by the provider's generation
counter. That counter bumps on every ledger mutation and rebuild boundary, so
a provider bumping it on routine work re-emitted the same unchanged line on
every read, while one that never bumped could suppress a line whose reasons
had genuinely changed. The generation is still reported; it no longer decides
whether the line is worth saying.

CORRECTION, and it is against my own earlier claim: the idle-flush commit read
a reported idle-CPU observation (many stores, no writes, a flush every ~35s,
over a core burned) as caused by
the flush path. That does not follow — this engine's cadence is write-driven
(every trigger runs through noteWriteForPersistence, which only a committed
write calls), so something was CALLING flush() on those brains and the caller
is still unidentified. The clean-flush gate makes such a call free; it does not
account for it. The code comments and the idle lane now say exactly that.

Pins: tests/integration/flush-watcher-event-driven.test.ts — an idle writer
makes at most one request-directory read in 8 seconds (the old poll made ~16),
and a dropped request is still acked well inside the safety sweep.
2026-08-28 11:25:47 -07:00
417ddb5143 perf(open): answer "are there any entities?" with one directory read
The 7.x-to-8.0 layout probe runs on the open path of every store that does not
yet carry its completion marker — a restore, a store built by an older release
— and asked whether the canonical tree holds anything by LISTING it: a
recursive walk of every file in every entity directory, to learn a boolean. It
now asks the one-level door added for generation discovery, falling back to the
listing on an adapter that lacks it.

Also files a defect found while ratifying the operator set: the VFS builds its
path-prefix filter as `$startsWith`, an operator no engine spelling accepts,
so vfs.searchFiles({ path }) throws INVALID_QUERY on every call that passes a
path. Pre-existing, unrelated to the operator work, and left as a filing —
a path-prefix search needs a design answer, not a spelling correction.
2026-08-28 11:13:24 -07:00
e4c27fbca8 fix(flush): clear() and repairIndex() set the dirty witness themselves
Both mutate durable state outside the two commit paths, so neither was seen by
the flush witness added with the idle-flush law. A clear() followed by a
flush() would have found the brain "clean" and skipped the entity-tree stamp,
leaving a stamp describing the population the clear had just removed — a false
divergence warning at the next open. Closing the gap where it is, rather than
widening the witness to guess.
2026-08-28 11:06:06 -07:00
5a091ccad9 feat(open): the open names the STEP that cost the time, not just the phase
A phase that costs a minute and names only itself tells an operator where to
look but not what to look at. MEASURED on a real 14,056-noun / 72,679-verb
store, the warm reopen's generation-store phase cost 55,538 ms with nothing
inside it named — the fold was skipped (the close was clean), so the cost was
somewhere else entirely and the breakdown could not say where.

Six steps inside the open now report their own wall with their own cause when
they exceed the phase threshold: the generation store's open (manifest,
committed ranges, fact log, packed tier, crash replay), the entity-tree stamp
verification, the brain-format read, the pre-upgrade backup, the derived-index
gate, and the VFS init. Silent under the threshold, so a fast open says nothing
extra. Same always-visible channel as the phase lines.
2026-08-28 11:02:57 -07:00
50676c02f4 fix(open): a provider rebuilding itself is a third state, not a CRITICAL
Follower to the self-rebuild deference. The open gate's consistency check —
"metadata index has 0 entries but storage has N entities" → CRITICAL + a forced
second rebuild — knew two states, migrating and not. A provider whose rebuild()
returns once the rebuild is OWNED AND RUNNING ONLINE (its doors refusing by
name while other families serve) legitimately reports 0 entries there, so every
first contact printed a false CRITICAL and kicked a redundant second rebuild.

The exemption rides the rebuild-progress hook, NOT isMigrating() — widening
that would hold every write and 503 the whole brain through the migration
snapshot, which is worse than the false alarm. The check's real class is
untouched: a provider reporting 0 entries with no rebuild in progress still
trips it.

The crash-recovery rebuild kick gets the same deference: a provider already
rebuilding itself from canonical is doing exactly that work, and the fold ran
in the generation store's open before any provider existed, so what it is
reading is the repaired canonical.

Pin: a provider stub reporting a rebuild and 0 entries opens with no CRITICAL
line and no second rebuild; the vacuous-stub case fails loudly.
2026-08-28 10:50:26 -07:00
131daa08cd feat(open): open never waits for a provider that is rebuilding itself
MEASURED on a production store: a metadata provider that had to rebuild made
init() pay the ENTIRE rebuild on the foreground — 641 seconds — with every
other family idle behind it. The cause is a missing distinction: a provider
reporting serving:false because it is BUSY BUILDING ITSELF and one reporting
serving:false because it is BROKEN looked identical through healthReport(),
and both were answered the same way — call rebuild(), and wait for it.

The contract that tells them apart is one optional, synchronous, O(1) hook:
`rebuildInProgress(): ProviderRebuildProgress | null`, reporting a phase name
and whatever the provider actually measures (done/total/startedAt) — never an
estimate dressed as a fact. A provider without the hook behaves exactly as
before.

With it, a provider owns its own rebuild:
- the open gate neither starts a second rebuild nor waits for the provider's,
  and narrates that it is not waiting and what will refuse meanwhile;
- init() returns and every other family serves;
- that family's doors refuse BY NAME, carrying the provider's own progress,
  and say plainly that the door opens by itself and no action is needed —
  distinct from a broken index, which names repairIndex();
- the epoch stamp does not advance while any family is still being built.

Nothing is ever served empty: a not-serving family refuses, as it already did.

Pins: tests/integration/open-does-not-wait-for-a-rebuilding-provider.test.ts —
init() returns in milliseconds against a provider claiming a 6s rebuild, brainy
starts no rebuild of its own, a filtered read refuses naming the phase and the
4,096/14,056 progress, and the door answers once the provider reports serving.
The pin fails loudly rather than vacuously if its stub never installs.
2026-08-28 10:48:52 -07:00
f5a6cb3f61 perf(flush): an idle brain does no work — no periodic flush without a write
REPORTED from the field: a process holding many stores, with no writes for ten
minutes, printed "All indexes flushed to disk in 216-601ms" per store every
~35 seconds and burned over a core at idle. Every one of those flushes re-persisted
state identical to what was already on disk — the provider flushes, the
watermark stamps, the generation counter, the entity-tree stamp — because
flush() never asked whether anything had changed.

- flush() over a clean brain is now O(1) and silent: a dirty witness is set by
  every committed write (both commit paths end at noteWriteForPersistence, and
  the deferred-embed worker lands through the single-op path) and cleared by a
  flush that runs. A write landing DURING a flush sets it again, so no write's
  work is ever skipped — it is done by the next flush. Set before the policy
  check, so a `'manual'` consumer's explicit flush is never a no-op it didn't
  ask for.
- An explicit flush now tells the cadence it happened. It didn't, so the very
  next write saw "30s since the last flush" and kicked a background flush with
  nothing to do, and the idle timer fired two seconds later over writes the
  explicit flush had already persisted.
- The graph adjacency index's auto-flush asks before it acts: two O(1) reads
  of the LSM MemTables, and a tick over a quiet index returns without calling
  into the trees at all.

assessProviderHealth is NOT timer-driven — it is a synchronous O(1) read of a
provider's own healthReport(), called on the read gate, so it costs nothing on
an idle brain. No change needed there.

Pins: tests/integration/idle-costs-nothing.test.ts — 90 idle seconds produce
zero flushes, zero provider calls and zero log lines; three explicit flushes
over a clean brain call no provider; one write earns exactly one flush.
2026-08-28 10:44:38 -07:00
3fffd9c6e6 feat(repair): repairIndex narrates every phase and its receipt carries the walls
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On a production store (14,647 nouns / 73,070 verbs) a repairIndex() ran for
more than thirty minutes at roughly a full core with ZERO log lines between
its start and its end, while the read doors kept serving. The operator could
tell it was alive only from `top`, and could not tell which of its
single-threaded walks it was inside.

Same law as the open, applied to the repair:
- every phase announces itself BEFORE it works, naming what it is about to
  walk (each canonical walk, the VFS containment reconciliation, each
  provider's invariant pass);
- an unref'd heartbeat names the phase still running every 5s, for as long as
  it runs;
- every phase reports its own wall, and that wall is carried in the TYPED
  receipt as RepairFamilyReport.durationMs — a receipt that cannot say where
  the time went is not a receipt;
- the whole repair's narration moves to the always-visible channel, so a
  production log level cannot silence it.

The phases move into runRepairIndexPhases() so the heartbeat can live in a
finally around them; the public door and its report shape are unchanged apart
from the added durationMs.

Pins: tests/integration/repair-narration.test.ts — every checked family has a
start line, a finish line with its wall, and a numeric durationMs in the
receipt; a phase slowed to 6.5s produces a heartbeat naming it, with the
logger clamped to ERROR.
2026-08-28 10:31:42 -07:00
afe08a1ff9 feat(open): the open narrates itself, on a channel production cannot clamp
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An operator watched a production service open a 16 GB store and print nothing
for three minutes before its first line of work. Two defects, both fixed here.

The narration was written to `prodLog.warn`, and every environment that looks
like production clamps the logger to ERROR — so the phase breakdown that would
have named the slow phase was composed and thrown away. `prodLog.narrate` is
always visible, like `error`: it carries the two things an operator is
entitled to hear from a database regardless of a cost setting — why it is slow
and what it is doing about it. `silent: true` still silences it; that is a
request, not a default.

And nothing spoke DURING a phase, only after the whole open. init() now runs
an unref'd heartbeat that every 5s names the phase currently running, its
elapsed wall and what it is paying for, plus one line per phase as it ends for
any phase over 2s. The generation-log fold's own progress and completion lines
move to the same channel and now carry their wall — they were invisible in
production, which is how an operator came to restart a converging fold three
times.

Pins: tests/integration/open-narration.test.ts — narrate() survives the clamp
that silences warn(); a 6.5s storage-init produces a heartbeat naming the
phase and a completion line naming its wall, with the logger clamped to ERROR.
2026-08-28 10:19:55 -07:00
e652162c1f fix(storage): a clean close is recorded, and the writer lock is always given up
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A production restart made this necessary: a service stopped with exit code 0,
having awaited close() on every pooled brain, and its next boot announced
"Overwriting stale writer lock ... appears dead" for every store it owned.
Nothing had crashed. "The recorded pid is gone" is equally true of an orderly
restart and of a crash, so the verdict could not tell an operator which one
they had — and when the OS recycles a pid it fails the other way, refusing to
open a store whose writer died days ago.

Three changes, all at the law:

- close() is two parts, and the second is unconditional. The durable steps
  (flush, markers, component close, plugin deactivate, buffer drain) move to
  closeDurableSteps(); the terminal releases — the flush-request watcher, the
  WRITER LOCK, the VFS timers, the terminal `closed` flag — always run. The
  original failure is narrated with what it costs the next open, then rethrown.
- releaseWriterLock() writes a CLEAN-CLOSE RECORD (`locks/_writer.close`)
  naming the lock generation it released; the next claim consumes it, so a
  record can never vouch for a later crash. An open reads the record instead
  of guessing: recorded → nothing to recover; absent → say so, and name the
  crash recovery this open will now run.
- The signal path stops failing in a batch. It was one try around a loop over
  every open brain, so the first instance whose flush rejected stranded every
  remaining brain's lock and markers — at exit code 0. Now: per-instance
  isolation, the generation store's close (the clean-shutdown marker, without
  which the next open folds the whole log) is part of shutdown, the lock is
  given up in a finally, and the handler no longer calls process.exit() when
  the host application has its own signal handler — that race truncated the
  host's own close() mid-flight.

Pins: tests/integration/writer-lock-clean-close.test.ts — completed close
leaves no lock and a consumed-once record with a silent reopen; a failing
durable step still releases and still rethrows; SIGKILL leaves the lock with
no record and the reopen names the crash; a host SIGTERM handler runs to
completion.

Branch plan (10 lines):
 1. writer lock: clean-close record + always-release close  [this commit]
 2. open narration: an always-on channel; production clamps prodLog to ERROR,
    which is why a three-minute open printed nothing
 3. open narration: per-phase lines as each phase ENDS, with progress cadence
 4. measure both real-store fixtures on the box, before/after
 5. move the generation-log fold out of the foreground where the serving law
    allows; durable resumable progress marker
 6. same for the VFS bootstrap
 7. counts: a legacy container-rule ledger must not keep serving wrong
    denominators; counts.json written atomically
 8. counts pin with scar directories; two copies of one archive agree
 9. docs/canonical-layout-ratification.md — 12 facts confirmed/corrected
10. report: MEASURED before/after, findings, and whether this is 10.4.4
2026-08-28 10:17:20 -07:00
a99b1e83c4 chore: rename to @soulcraftlabs/brainy for Open Brainy on The Source
Prepares the repo for its new home at soulcraftlabs/open-brainy ahead
of the Forgejo transfer: package name, publish registry, release
script, and every install/import reference across docs, src, tests,
examples, and integrations now point at @soulcraftlabs/brainy on
The Source. The npmjs storefront leg and byte-identity pair
verification are stripped from the release script — The Source is
now the only publish target. README gains an Open Brainy explainer
and a registry note for consumers.

@soulcraft/brainy 10.4.2 was the last release under the old name.
2026-08-27 17:07:09 -07:00
0de7665930 fix(vectors): a zero-norm vector is not a vector, canonical side included, plus the sanctioned unvector door
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The engine-pair seam law: a zero-norm vector never crosses an engine
boundary. The index belt already refused to insert one, but the canonical
write and the vectored-noun ledger still counted it, so a near-empty store
whose only vectored row was zero-norm read "1 canonical vectored vs 0
indexed" and threw a not-ready error at open, and a store's own legacy
zero-norm VFS root could trip the same gate before its VFS-init-time cure
ever ran.

- add()/update() (single and transact()) now normalize an explicit
  real all-zero vector to the unvectored [] shape before the dimension
  pin, the ledger flag, and the index ops ever see it (loud, one warn per
  write, canonical write still succeeds).
- The legacy counts.json derivation walk (scanVectoredNounCount) excludes
  a persisted zero-norm row, matching the live ledger's definition.
- A legacy zero-norm VFS root now migrates at open, before the vector-leg
  gate evaluates, via one O(1) fixed-path read (torn-tolerant — skips
  rather than aborting init on a torn root, letting the recovery walk
  heal it) — independent of whether a VirtualFileSystem is ever
  constructed this session.
- update({ id, vector: [] }) (and the same op inside transact()) is now
  the sanctioned, idempotent unvector door: index removal, exactly-once
  ledger decrement, no re-embed, and it clears a pending deferred-embed
  marker rather than leaving it to re-vectorize the row later. The
  combination with deferEmbedding is a typed refusal.
- JsHnswVectorIndex.rebuild() now skips a zero-norm/empty persisted
  vector when repopulating from canonical (the same belt the live
  add/replace paths already had), and health()'s index-parity check now
  compares HNSW size against the vectored-noun ledger rather than the
  raw metadata-entry count, since a store's VFS root is permanently
  unvectored by design.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
2026-08-27 13:53:09 -07:00
2496e09aeb fix(init): rethrow plugin activation failures with the original error as cause so the originating frame survives to the caller 2026-08-27 12:07:09 -07:00
c6cc0de955 fix(vfs): the VFS root never persists a zero-norm vector
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A zero-norm vector is lawful inside brainy (cosine distance scores it at
maximum, never a false top hit) but a false attractor for a downstream
engine serving squared-euclidean distance, which cannot tell a real
all-zero vector apart from a legitimate origin point.

- The VFS root now persists with vector [] (the existing "unvectored"
  shape) instead of a real all-zero 384-dim placeholder, and is never
  routed into the deferred-embed pipeline.
- A one-time migration in the root-init path detects a pre-fix store's
  all-zero placeholder root (by norm, not length) and rewrites it to []
  through a new sanctioned Brainy method that keeps the canonical
  vectored-noun ledger honest and removes the row from the vector index.
- The vector-index write seam (AddToVectorIndexOperation,
  ReplaceInVectorIndexOperation, and the generation materializer's direct
  insert) now refuses any real all-zero vector before it reaches a
  provider, loudly naming the entity, while the canonical write still
  lands.
- add()'s dimension-pinning and HNSW-insert gates, and the add-params
  validator, now treat any empty vector as carrying no dimension
  information, closing a latent trap where an explicit `vector: []`
  would have pinned dimensions to 0.
2026-08-27 09:28:44 -07:00
c039411e08 fix(reads): the read gate is per-family; a write carrying unchanged data never re-embeds
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Two cures from the pair's first production adoption, both measured live.

THE READ GATE IS PER-FAMILY. The report-driven gate refused on ANY
provider's not-ready verdict at every read choke point — so a pure
metadata find({ where }) was refused because the VECTOR leg was not
serving, and a deployment's badge reads returned errors for a verdict that
had nothing to do with them. A read may only be refused by the family it
actually consults: metadata reads by the metadata leg (plus graph for a
`connected` filter), vector search by the vector leg, traversal by the
graph leg. Callers name what they need; the existing narration-once-per-
generation and typed-refusal laws are unchanged within a family.

NO RE-EMBED ON UNCHANGED DATA. update() — and its transact() planner —
treated any write that carried `data` as a data change: with
deferEmbedding it queued a landing, and the worker re-embedded and re-landed
a vector for content that had not changed. A host heartbeat re-writing an
unchanged row every few seconds therefore fed a live index-row loop on a
production store. A write carrying the row's current data (structural
compare, key order normalized) is now not a data change: no re-embed, no
deferred landing, no vector rewrite; the metadata write itself still
commits. A real change re-embeds exactly as before.

Pinned in tests/integration/read-gate-scope-and-no-reembed.test.ts — both
pins red-proved against the unfixed code with the production shapes
verbatim. Two health-gate pins that encoded the old brain-global scope are
re-pointed to the family their reads consult.
2026-08-26 13:55:11 -07:00
9730835bdf feat(vector): the vectored-noun scalar joins the count ledger; the open gate closes the vector leg
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The coverage denominator the health-by-accounting ratification named for
the vector family — never built until now, and its absence was measured as
the exact outage class it existed to prevent: a migrated store with
canonical vectors and no derived index opened with the vector leg EMPTY,
served [] from vector search with no error, and the report-driven read gate
had nothing to refuse on (the provider's coverage invariant was honestly
unledgered — the denominator was ours to supply).

- getCanonicalCounts() gains vectors: { all } — the count of canonical
  nouns holding a REAL vector. Incremented where a vector lands (the
  isNew-gated metadata seam for explicit vectors — the same discipline that
  keeps HNSW neighbor-link re-saves from inflating counts; a narrow
  noteVectorLanded hook for the deferred-embed landing, gated on the
  worker's own pre-embed read). Decremented on a proven delete of a
  vectored noun; a vector-uncertain delete marks the ledger suspect rather
  than guessing (no new reads on the delete path). Recounted by the
  sanctioned recount; legacy counts.json derives it once (a deferred noun's
  vector file exists with an empty vector, so presence requires one
  content read at derivation — never on the hot path).
- The open gate's vector leg: when a health-reporting provider claims
  serving while the index holds zero nodes and the ledger proves vectored
  canonical rows exist, open BUILDS (narrated) — routed through the
  provider's idempotent fillFromCanonical() when exposed (the joint door;
  a partial shortfall stays repair()'s operator business), the JS rebuild
  otherwise — or fails typed pre-serve. Scoped exactly: bare isReady()
  providers, migrating providers, and white-box size stubs open as before.

Pinned end-to-end from the partner gate's probe shape (store with vectored
canonical rows, no derived index, reopen → search serves N, never []),
red-proved against the pre-fix path; the inverse (zero vectored rows) opens
without building and serves [] honestly.
2026-08-25 15:31:19 -07:00
f4780c8e88 fix(update-seam): the metadata crossing never carries BigInt endpoint ints
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resolveVerbEndpointInts mirrors the resolved u64 endpoint ints onto the
verb object itself as BigInt (verb.sourceInt/targetInt) for the graph legs'
own params. The live verb path's delete legs then reused that same object
as the metadata-index crossing — and the seam's metadata is JSON-safe by
contract (a native provider serializes it; u64 as Number corrupts above
2^53), so JSON.stringify threw and the whole transaction aborted. Found by
the first joint pair gate; four downstream suites red from one crossing.

The crossing now routes through a JSON-safe view that drops BigInt-valued
top-level keys — endpoint ints ride their own op params on the graph legs,
exactly as designed, and never the metadata crossing. Applied at the
retraction helper (cascade + unrelate + transact mirrors) and
updateRelation's remove leg.

Pinned by driving the exact shape (relate resolves ints, remove cascades
the same object) through a provider shim enforcing the JSON contract —
red-proved against the unfixed path (the joint gate's verbatim error),
green with the fix.
2026-08-25 12:07:28 -07:00
f14da34b27 Merge branch 'worktree-agent-ad3aff0dffd17a6eb'
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2026-08-25 11:47:25 -07:00
553e0d97ae feat(repair): a heal:'repair' verdict routes to the provider's own incremental repair()
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repairIndex() acted only on heal:'rebuild' — an invariant asking for the
INCREMENTAL heal (re-post exactly what the ledger names, O(missing), never
a store-sized rebuild) did nothing on brainy's side. A failing 'repair'
verdict now routes to the provider's feature-detected repair(); the
post-heal RE-READ of the report decides success (the acceptance meta-pin's
law — run the named heal once, re-read, nothing may still fail the same
way), and a repair that does not converge is recorded with the escalation
named: repairIndex({ rebuild: [family] }).
2026-08-25 10:47:51 -07:00
258e9042af fix(add): empty string is real data, not a missing field
validateAddParams() treated '' as falsy and rejected it with "Missing
required field 'data'" — so a legitimate empty file's first write always
failed. Only null/undefined data (with no vector either) is genuinely
absent; '' is real content. Fixed the check, plus the identical bug in
validateUpdateParams() (truncating a file to empty via overwrite hit the
same falsy check) and in update()/transact()'s update planner, where a
plain `Boolean(params.data)`/truthy check on the resolved vector would have
silently skipped both the deferred-embed marker and the eager re-embed for
an emptied value — a stale vector with no path to ever correct itself.

Verified end-to-end: vfs.writeFile('/empty.txt', '') now succeeds,
readFile() returns '', the file lists, and stat() reports size 0; the
existing "should reject empty string as data" tests (unit + integration)
asserted the old buggy behavior and are updated to assert the fixed
contract instead.
2026-08-25 10:10:19 -07:00
96624f408c feat(open-path): init never gates on the embedding model; open goes concurrent; slow opens narrate
A production restart storm measured 90,017ms for a single brain init vs
1,117ms quiet (~80x contention multiplier), traced to performInit() eagerly
awaiting the process-global WASM embedding engine before the VFS root even
existed. Every writer's open() queued on the one throttled model compile
(90-140s on throttled CPUs).

- VirtualFileSystem.doInitializeRoot() no longer embeds '/'. The root is
  system-tier plumbing nothing ever searches; when the default WASM engine
  is active it now gets an explicit all-zero placeholder vector
  (cosineDistance returns max distance for a zero vector, so it never ranks
  ahead of real content). deferEmbedding was considered and rejected: its
  landing path kicks the embed worker synchronously right after commit,
  which would still force the cold compile within milliseconds — just off
  the awaited path, not avoided. A registered native 'embeddings' provider
  (no cold-start cost, possibly a different dimension) still embeds the
  root for real, via the new Brainy.usesDefaultWasmEmbedder() seam.

- performInit()'s eager-embedding step now only STARTS the WASM engine warm
  in the background instead of awaiting it inline. embed()/embeddingManager
  already serialize concurrent callers on one shared init promise, so the
  first real embed() converges correctly either way; a failed warm narrates
  loudly instead of surfacing as a silent latency spike or an unhandled
  rejection. eagerEmbeddings: false still means no warm at all.

- FileSystemStorage.init() batches its ~8 independent bootstrap mkdirs
  (each creates its own full subtree via recursive:true, so none depend on
  the others existing) into one Promise.all. The restore-completion step
  and initializeCounts() stay strictly sequential — they have real order
  dependencies on rootDir and systemDir respectively.

- performInit() now times five phases (storage init / generation-store
  open+fold / index init+gate / VFS bootstrap / embedding-warm-started) and
  logs one warning with the per-phase breakdown when total open exceeds
  2000ms; silent otherwise.
2026-08-25 10:09:45 -07:00
b9ba50fbec fix(plugins): the silent-degrade doors close — a broken accelerator install can never read as absent
The auto-detection "not installed" heuristic accepted any resolution failure
whose message merely CONTAINED the package name, unterminated — so a missing
platform-binary sibling package (what a deploy replacing node_modules
mid-restart leaves behind) read as "the accelerator is not installed", and
brainy silently served the default WASM engines with zero journal lines. A
production restart storm paid 90 seconds of throttled WASM compile behind
exactly that hole. The name must now terminate where it ends (quote,
whitespace, punctuation, end) — a sibling package, an inner file path, or a
dependency failure is a broken install and init() throws, as the guard's own
law always stated.

Second door: activate() returning false (the documented graceful decline)
warned on console.warn, which `silent: true` patches away — an invisible
degrade. The decline now narrates via the always-on channel.

Also exports CanonicalCounts from the public surface (the coverage-ledger
denominator type consumers read through getCanonicalCounts()).

Pinned in tests/unit/plugin-activation-loudness.test.ts (five error shapes;
the decline warn under silent: true).
2026-08-25 10:01:56 -07:00
18f172e098 feat(recovery): the catchup verdict is consumed; verb rows go live; the metadata rebuild goes online
Three cures on the JS metadata index, one seam:

- THE CATCHUP WIRING. The index computed its three-way watermark verdict at
  open and nothing consumed it — after a crash + adopt reopen, find() served
  the pre-crash index while canonical reads and counts recovered (caught by
  the lifecycle lane's first run). The open path now consumes the verdict:
  'adopt' is a no-op, 'catchup' folds the fact window (stamped, committed]
  through the index legs — nouns and verbs, remove-then-add, one mechanism
  for add and update — and 'rescan' runs the explicit rebuild, each narrated.
  The lane's Ch4–6 release-blocking marker comes off: the contract holds.
  Bonus root-cause: close() never stamped the projection watermarks (only
  flush() did), so any close without a prior flush verdicted a needless
  'rescan' on reopen — both doors now stamp.

- THE LIVE VERB PATH. Verb rows entered the metadata index only via rebuild
  walks, so every rebuilt store minted phantom/stale verb postings from its
  first live relate(). relate()/unrelate()/updateRelation() and remove()'s
  cascade now post/retract the verb's row in the same commit as the graph
  leg — transact() planners mirror identically — using the exact record
  shape the rebuild walk uses, so live and rebuilt populations agree.

- THE ONLINE REBUILD. rebuild() was clear-then-walk — every metadata read
  empty for the duration. rebuildMetadataIndexOnline builds a fresh manager
  beside the serving one (shared identity, in-memory build, dual-write via
  a shadow seam with zero call-site changes), atomically swaps the
  reference, and persists exactly once post-swap. A find() polled ~200x
  during a 2k-noun rebuild never dropped below its baseline.
  repairIndex({ rebuild: ['metadata'] }) uses it automatically.
2026-08-25 10:01:56 -07:00
f8f64780b1 feat(health): the gate reads the named report — reads refuse loudly, never rebuild; open serves before it returns; the ceremony door
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The read gate stops consulting the unnamed isReady() boolean: every provider
may expose healthReport() (sync, O(1), composed from exact ledgers —
HealthReport with a monotonic generation, per-invariant source
ledger|deep|unledgered, missing {count, sample}), and one readiness
authority (assessProviderHealth) derives the verdict. Unledgered families
are UNKNOWN — never healthy, never broken; a report that throws is a loud
not-ready, never a shrug. Reads at the four index choke points refuse with
the typed NotReady errors, narrated once per (provider, generation) — a
read NEVER starts a store walk:

- the first-read lazy build retires (open builds instead, regardless of
  size — the ≥10k deferral and the "lazy loading on first query" branch go;
  disableAutoRebuild is re-meant honestly in its docs);
- the verify*Live read-path rebuild triggers retire (refuse-or-serve);
- the read-time consistency probe that could launch a dark rebuild from an
  ordinary find() retires;
- repairIndex({ rebuild: ['metadata'|'graph'|'vector'] | 'all' }) is the
  one explicit door: rebuilds the named leg unconditionally and reports
  rebuilt per family; bare repairIndex() stays report-driven.

test(lifecycle): the biography lane — a store's whole life, refereed

tests/lifecycle/: an independent shadow model referees every read after
every chapter (founding, a working day, clean restart, crash, repair,
second life). Chapters 1-3 green. Chapters 4-6 assert the true contract and
are marked .fails as a release-blocking finding (the kill-matrix
convention): after a crash + adopt reopen the metadata index computes its
'catchup' watermark verdict and nothing consumes it — find() serves the
pre-crash index while canonical and counts recover. The catchup wiring is
the cure; a passing .fails will force the marker's removal. The lane runs
in the integration gate (config + coverage guard).
2026-08-24 12:45:51 -07:00
116550eb16 fix(health): one contract for a throwing probe — heal is none, serving is not withheld; repair report gains missing/rebuilt/reason
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A validateInvariants() that threw was re-synthesized by the host's catch as
heal:'rebuild' with serving:false — a rebuild lever one transient exception
away, while the native provider's own composer reports the same event as
heal:'none'. Two components disagreeing on what a thrown check means is how
a flaky probe becomes an outage. Both now agree: the report is named
('validate-invariants-threw'), loud (healthy:false, the error in detail),
unverified — and it never buys a rebuild and never withholds serving; the
provider's serving verdict is the provider's to compose, not inferred from a
probe that failed to run. The synthesized report also carries the provider's
name instead of 'unknown'.

RepairFamilyReport gains `missing: {count, sample}` (an exact count plus a
capped id sample — a verdict, not a dump), `rebuilt` (a full generational
rebuild ran, as opposed to an incremental heal) and `reason`, aligning the
receipt's shape with the provider-side health report.

Pinned in tests/unit/validate-invariants-delegation.test.ts.
2026-08-24 09:54:25 -07:00
607e9f5492 fix(delete): the null-metadata skip closes — index legs run id-keyed or narrate, never silently strand postings
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remove() guarded its index legs with 'if (metadata)': a row whose canonical
metadata was unreadable at delete time kept its postings forever, silently
(the leak class a partner audit confirmed at this exact site). Closed at
all three provider shapes: a provider exposing the id-keyed removal
contract (removeEntityById, arriving with the accelerator's next minor)
gets exact per-entity retraction; the JS index gets id-keyed cleanup
(deleted bitmap + id mapper — field stats reconcile at rebuild), narrated;
a native provider without the contract is NEVER called metadata-omitted
(that path walks the store's value space) — its skip is narrated and
tracked in the degraded set for repairIndex, never silent. The pre-reads
are torn-tolerant: a torn record is deletable (the delete is the cure).

Pinned: a metadata-less row with live postings deletes cleanly and leaves
the query universe; the delete-family suites stay green alongside.
2026-08-20 11:53:58 -07:00
8d45f964e9 feat(repair): repairIndex returns the per-family receipt and narrates its summary
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repairIndex() now returns a RepairReport: one row per repair family
(orphaned containers, count rollups, VFS containment, metadata corruption,
write quarantine, each provider's invariant pass, degraded-read state) with
checked / healed counts and an explicit skip reason for anything not run —
no silent rows. A summary line narrates families checked and heals applied.

This is the receipts half of the graph-trust program's ask: a repair that
cannot show its work per store is a repair nobody can audit. Pinned: a
healthy store yields a complete zero-heal receipt with every family
accounted; a manufactured pre-8.3.1 ghost container appears in the receipt
as a counted heal. Additive: void-callers are unaffected.
2026-08-20 11:51:29 -07:00
40e7119b85 fix(reads): the readiness gate guards every index read surface — serving empty from a not-ready provider is unrepresentable
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A production store acked writes while readback served empty for fifteen
minutes. The brainy half: the lazy readiness gate had exactly one caller —
find() — while related() and every VFS path served straight from providers
that init had deferred (disableAutoRebuild on a large store). A false
health verdict from the accelerator pulled the trigger; the unguarded read
surfaces were the gun.

Every index read funnels through three helpers; the gate now lives at those
choke points, so any first read on a cold instance waits for the build and
then serves truth — the fast path after the latch is one boolean. The lazy
build's start is narrated through the production logger, never the
silent-suppressible console: fifteen silent minutes taught that line.

Pinned with the production shape: related() as the first-ever read on a
fresh lazy instance serves the relation; a filtered find serves the row.
2026-08-20 11:49:03 -07:00