open-brainy/tests/unit/db/generation-segments.test.ts

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feat: generation-segment store — the D1+D3 packed-tier file format First stage of the co-frozen D1+D3+repacking unit: the format core, self-contained under _generations/segments/. - seg-<firstGen,20pad>.bgs: append-once packs of consecutive generations (magic BGS1; frame = u32 len + u32 crc32c + msgpack [generation, timestamp, delta, records, flags]; flags reserves compressed-payload evolution without a format break). Sealed segments are immutable — fold refuses overlap with sealed ranges. - seg-<firstGen>.idx: DERIVED sidecar (per-generation frame offsets + per-id generation postings + checksums); lost/corrupt sidecars rebuild from their segment loudly; a damaged segment (frame CRC mismatch) fails loudly, never serves wrong bytes. - manifest.json: the one discovery path — open() reads it and never lists the packed backlog (the scan-wedge class's cure); refuses a newer manifest version rather than serving partial history. - D3 semantics: dropSegmentsBelow reclaims WHOLE segments at boundaries only and bumps compactedBelow durably; archival-profile enforcement stays with the caller per the co-freeze. - D8 rider: digestThroughPacked(g) — deterministic crc32c chain over sealed-segment checksums (+ frame-level prefix mid-segment), O(segments), reopen-stable. Also fixes a cross-adapter contract bug the suite caught: memory storage's deleteObjectFromPath ignored the raw-bytes store, so deleteRawObject on a raw-bytes path (fact-log or segment files) silently no-op'd — deletes now match filesystem unlink semantics. Six pins. Wiring into GenerationStore (two-tier reads, the repacker, cold-open manifest path) lands with the rest of the unit before its release; cortex's fact-record/stamp shapes reconcile the sidecar keying when they post.
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/**
* @module tests/unit/db/generation-segments
* @description The generation-segment store (Stage-2 D1+D3 file format).
* Laws: (1) fold read round-trips deltas and records byte-faithfully via
* sidecar point-reads; (2) the manifest is the ONLY discovery path reopen
* reads one file, never a listing; (3) a lost/corrupt sidecar rebuilds from
* its segment loudly, a damaged SEGMENT fails loudly (never silent wrong
* data); (4) D3 reclaim drops whole segments only and bumps compactedBelow;
* (5) the packed digest is deterministic across reopen; (6) immutability
* fold refuses overlap with sealed ranges.
*/
import { describe, it, expect, beforeEach } from 'vitest'
import { MemoryStorage } from '../../../src/storage/adapters/memoryStorage.js'
import {
GenerationSegmentStore,
SEGMENTS_PREFIX,
type FoldGeneration
} from '../../../src/db/generationSegments.js'
const UUID = (n: number): string => `00000000-0000-4000-8000-${String(n).padStart(12, '0')}`
const gen = (g: number, recordCount = 2): FoldGeneration => ({
generation: g,
timestamp: 1_700_000_000_000 + g,
delta: { generation: g, nouns: [UUID(g)], verbs: [], bytes: 123 + g },
records: Array.from({ length: recordCount }, (_, i) => ({
kind: (i % 2 === 0 ? 'noun' : 'verb') as 'noun' | 'verb',
id: UUID(g * 100 + i),
record: { metadata: { noun: 'document', v: g }, vector: { v: [g, i] } }
}))
})
describe('db/GenerationSegmentStore — the D1+D3 packed tier', () => {
let storage: MemoryStorage
let store: GenerationSegmentStore
beforeEach(async () => {
storage = new MemoryStorage()
await storage.init()
store = new GenerationSegmentStore(storage as any)
await store.open()
})
it('fold → read round-trips deltas and records via sidecar point-reads', async () => {
const meta = await store.fold([gen(1), gen(2), gen(3)])
expect(meta).toMatchObject({ firstGeneration: 1, lastGeneration: 3, frames: 3 })
expect(meta.checksum).toBeGreaterThan(0)
expect(store.hasGeneration(2)).toBe(true)
expect(store.hasGeneration(4)).toBe(false)
const d2 = await store.readDelta(2)
expect(d2?.delta).toEqual({ generation: 2, nouns: [UUID(2)], verbs: [], bytes: 125 })
expect(d2?.timestamp).toBe(1_700_000_000_002)
const records = await store.readRecords(3)
expect(records).toHaveLength(2)
expect(records![0]).toEqual({
kind: 'noun',
id: UUID(300),
record: { metadata: { noun: 'document', v: 3 }, vector: { v: [3, 0] } }
})
// Point read by id, both kinds.
expect(await store.readRecord(3, 'verb', UUID(301))).toEqual({
metadata: { noun: 'document', v: 3 },
vector: { v: [3, 1] }
})
expect(await store.readRecord(3, 'noun', UUID(999))).toBeNull()
})
it('reopen discovers everything from the manifest alone — no listing', async () => {
await store.fold([gen(1), gen(2)])
await store.fold([gen(3), gen(4)])
const reopened = new GenerationSegmentStore(storage as any)
await reopened.open()
expect(reopened.segments()).toHaveLength(2)
expect(reopened.hasGeneration(4)).toBe(true)
expect((await reopened.readDelta(1))?.timestamp).toBe(1_700_000_000_001)
})
it('a lost sidecar rebuilds from its segment; a damaged segment fails LOUDLY', async () => {
const meta = await store.fold([gen(1), gen(2)])
const idxPath = `${SEGMENTS_PREFIX}/seg-${String(1).padStart(20, '0')}.idx`
await storage.deleteRawObject(idxPath)
const reopened = new GenerationSegmentStore(storage as any)
await reopened.open()
// Rebuild path: still serves correct data.
expect((await reopened.readRecords(2))!).toHaveLength(2)
// Now damage the SEGMENT itself: flip a payload byte → CRC mismatch, loud.
const segPath = `${SEGMENTS_PREFIX}/${meta.file}`
const bytes = (await storage.readRawBytes(segPath))!
bytes[bytes.length - 3] ^= 0xff
await storage.writeRawBytes(segPath, bytes)
const damaged = new GenerationSegmentStore(storage as any)
await damaged.open()
;(damaged as any).sidecars.clear()
await storage.deleteRawObject(idxPath) // force the sequential rebuild over damaged bytes
await expect(damaged.readRecords(2)).rejects.toThrow(/CRC mismatch|damaged/)
})
it('D3 reclaim drops whole segments only and bumps compactedBelow', async () => {
await store.fold([gen(1), gen(2)])
await store.fold([gen(3), gen(4)])
await store.fold([gen(5), gen(6)])
// Horizon mid-segment-2 (below 4): only segment 1 is FULLY below → drops.
const r1 = await store.dropSegmentsBelow(4)
expect(r1).toEqual({ dropped: 1, compactedBelow: 3 })
expect(store.hasGeneration(1)).toBe(false)
expect(store.hasGeneration(3)).toBe(true) // partial segment survives whole
// Bytes actually gone.
expect(await storage.readRawBytes(`${SEGMENTS_PREFIX}/seg-${String(1).padStart(20, '0')}.bgs`)).toBeNull()
// Horizon past everything: the rest drop; compactedBelow is durable.
const r2 = await store.dropSegmentsBelow(7)
expect(r2.dropped).toBe(2)
const reopened = new GenerationSegmentStore(storage as any)
await reopened.open()
expect(reopened.compactedBelow()).toBe(7)
expect(reopened.segments()).toHaveLength(0)
})
it('the packed digest is deterministic across reopen and changes with history', async () => {
await store.fold([gen(1), gen(2), gen(3)])
const atSeal = await store.digestThroughPacked(3)
const midSegment = await store.digestThroughPacked(2)
expect(atSeal).not.toBeNull()
expect(midSegment).not.toBeNull()
expect(midSegment).not.toBe(atSeal)
const reopened = new GenerationSegmentStore(storage as any)
await reopened.open()
expect(await reopened.digestThroughPacked(3)).toBe(atSeal)
expect(await reopened.digestThroughPacked(2)).toBe(midSegment)
await reopened.fold([gen(4)])
expect(await reopened.digestThroughPacked(4)).not.toBe(atSeal)
})
it('sealed segments are immutable — fold refuses overlap, requires ascending input', async () => {
await store.fold([gen(1), gen(2)])
await expect(store.fold([gen(2), gen(3)])).rejects.toThrow(/overlaps the packed tier/)
await expect(store.fold([gen(4), gen(4)])).rejects.toThrow(/strictly ascending/)
await expect(store.fold([])).rejects.toThrow(/at least one generation/)
})
fix(generations): a sealed segment may only declare the generations it holds Diagnosis of the "packed history is damaged" narration that fires on every run of the affected stores. It is a WRITER defect, and the reader's refusal was the symptom rather than the cause. A sealed segment declares one contiguous range [firstGeneration, lastGeneration], and every reader treats that range as containment: coveringSegment is an interval test, hasGeneration returns true for anything inside it, and open() seeds committedRanges from it. repackHistory handed fold() a SPARSE batch. Three filters punch holes in its candidate list mid-run — a generation absent from committedRanges never appears, one still in the pending buffer is skipped, one whose tx.json will not read is skipped — and fold() then computed the range from the first and last survivor, claiming every generation in between. The next open merged that mis-declared range back into committedRanges, re-admitting the hole as committed history, so the following auto-compaction pass asked the packed tier for a frame that was never written and failed. Re-merged at every open, which is why it repeated on every run. Confirmed against a forensic fixture: generation directories 1..2503 present except exactly one, 1416; and its fact-log segment already showed the tell — seg-...1410.bfl declaring 1410..1940 (531 generations) while recording 530 facts. Three changes: - repackHistory folds each contiguous RUN as its own segment (`contiguousRuns`), so ranges describe exactly what the segments contain. - fold() REFUSES a non-contiguous batch, naming the gap and its width. The density law is now mechanical, so no future caller can reintroduce it. A refusal loses nothing: the generations stay live and readable. - Stores already carrying the damage heal instead of wedging. A segment whose declared span exceeds its frame count is SPARSE; `actualRanges()` reads the real generation list from its sidecar so open() never re-admits the holes, and readFrame reports such a hole as unpacked with a narration naming the segment, rather than throwing. A DENSE segment missing a frame is still loud damage — that one means the manifest and sidecar disagree. Pins: nine unit cases (refusal and its message, honest ranges for separately folded runs, a reconstructed pre-fix sparse segment serving its real frames while reporting holes as unpacked, holes excluded from actualRanges, and the dense-segment damage path still throwing) plus an end-to-end case that deletes a generation directory and drives the real sequence — ordinary close()-time repacking folds over the hole, then reopen and compact must both complete. Verified red without the fix: the segment declared an 11-generation span while holding 10 frames. (cherry picked from commit 9a888c37e9ebec5573cd7ebd0764396f3a424de3)
2026-08-31 09:13:42 -07:00
// ==========================================================================
// THE DENSITY LAW
// ==========================================================================
//
// A sealed segment declares a CONTIGUOUS range and every reader treats that
// range as containment. Folding a sparse batch therefore makes the segment
// claim generations it does not hold — and because `open()` merges declared
// ranges back into committedRanges, the hole is re-admitted as committed
// history and every later maintenance pass fails asking for a frame that was
// never written. That is the "generation N is inside sealed segment
// seg-....bgs's declared range but has no frame — packed history is damaged"
// narration seen on every run of the affected stores.
it('fold REFUSES a batch with a hole — a dense range may not be declared over sparse input', async () => {
await expect(store.fold([gen(1), gen(2), gen(4)])).rejects.toThrow(
/not contiguous: 2 → 4 skips 1 generation/
)
// The refusal loses nothing: no segment was sealed, so the generations
// stay in the live tier and the next pass folds them correctly.
expect(store.segments()).toHaveLength(0)
expect(store.hasGeneration(1)).toBe(false)
})
it('a wider gap names how many generations it would have swallowed', async () => {
await expect(store.fold([gen(10), gen(20)])).rejects.toThrow(
/not contiguous: 10 → 20 skips 9 generation\(s\)/
)
})
it('two contiguous runs folded separately declare honest ranges', async () => {
// What the caller now does instead of folding across the gap.
const a = await store.fold([gen(1), gen(2), gen(3)])
const b = await store.fold([gen(7), gen(8)])
expect(a).toMatchObject({ firstGeneration: 1, lastGeneration: 3, frames: 3 })
expect(b).toMatchObject({ firstGeneration: 7, lastGeneration: 8, frames: 2 })
// The gap is honestly outside the packed tier.
for (const g of [4, 5, 6]) expect(store.hasGeneration(g)).toBe(false)
for (const g of [1, 2, 3, 7, 8]) expect(store.hasGeneration(g)).toBe(true)
expect(await store.actualRanges()).toEqual([
[1, 3],
[7, 8]
])
})
it('actualRanges() is exact and I/O-free for dense segments', async () => {
await store.fold([gen(1), gen(2)])
await store.fold([gen(3), gen(4)])
// Adjacent dense segments each contribute their declared range.
expect(await store.actualRanges()).toEqual([
[1, 2],
[3, 4]
])
})
// ---- pre-existing damage: a store sealed by the old writer ----------------
/**
* Seal a SPARSE segment the way the pre-fix writer did: write the bytes and
* sidecar for a contiguous run, then rewrite the manifest so the segment
* declares a wider range than the frames it holds. This reproduces on disk
* exactly what the affected stores carry, without needing the old code.
*/
const sealSparseSegment = async (): Promise<void> => {
await store.fold([gen(1), gen(2), gen(3)])
const manifest = (await storage.readRawObject(`${SEGMENTS_PREFIX}/manifest.json`)) as any
// Declare 1..5 while holding frames for 1..3 — generations 4 and 5 become
// holes inside a sealed range.
manifest.segments[0].lastGeneration = 5
await storage.writeRawObject(`${SEGMENTS_PREFIX}/manifest.json`, manifest)
}
it('a pre-existing sparse segment reports its holes as UNPACKED, not as damage', async () => {
await sealSparseSegment()
const reopened = new GenerationSegmentStore(storage as any)
await reopened.open()
// The frames it really holds still serve, byte-faithfully.
expect((await reopened.readDelta(2))?.timestamp).toBe(1_700_000_000_002)
expect(await reopened.readRecords(3)).toHaveLength(2)
// The holes answer "not packed" instead of throwing. This is the fix for
// the wedge: the old reader threw here on EVERY maintenance pass.
expect(await reopened.readDelta(4)).toBeNull()
expect(await reopened.readRecords(5)).toBeNull()
})
it('actualRanges() excludes the holes so they are never re-admitted as committed', async () => {
await sealSparseSegment()
const reopened = new GenerationSegmentStore(storage as any)
await reopened.open()
// Declared 1..5; actually holds 1..3. The store seeds committedRanges from
// THIS, so generations 4 and 5 never become committed history again.
expect(await reopened.actualRanges()).toEqual([[1, 3]])
})
it('a DENSE segment missing a frame is still loud damage', async () => {
// The other side of the branch: when the manifest claims a complete span,
// a missing frame means the manifest and sidecar disagree — real damage,
// and it must not be quietly downgraded to "unpacked".
await store.fold([gen(1), gen(2), gen(3)])
const idxPath = `${SEGMENTS_PREFIX}/seg-${String(1).padStart(20, '0')}.idx`
const raw = (await storage.readRawBytes(idxPath))!
const { decode, encode } = await import('@msgpack/msgpack')
const idx = decode(raw) as any
// Drop generation 2's entry while the manifest still declares 3 frames.
idx.generations = idx.generations.filter(([g]: [number]) => g !== 2)
await storage.writeRawBytes(idxPath, encode(idx))
const reopened = new GenerationSegmentStore(storage as any)
await reopened.open()
await expect(reopened.readDelta(2)).rejects.toThrow(
/manifest and the sidecar disagree; packed history is damaged/
)
})
feat: generation-segment store — the D1+D3 packed-tier file format First stage of the co-frozen D1+D3+repacking unit: the format core, self-contained under _generations/segments/. - seg-<firstGen,20pad>.bgs: append-once packs of consecutive generations (magic BGS1; frame = u32 len + u32 crc32c + msgpack [generation, timestamp, delta, records, flags]; flags reserves compressed-payload evolution without a format break). Sealed segments are immutable — fold refuses overlap with sealed ranges. - seg-<firstGen>.idx: DERIVED sidecar (per-generation frame offsets + per-id generation postings + checksums); lost/corrupt sidecars rebuild from their segment loudly; a damaged segment (frame CRC mismatch) fails loudly, never serves wrong bytes. - manifest.json: the one discovery path — open() reads it and never lists the packed backlog (the scan-wedge class's cure); refuses a newer manifest version rather than serving partial history. - D3 semantics: dropSegmentsBelow reclaims WHOLE segments at boundaries only and bumps compactedBelow durably; archival-profile enforcement stays with the caller per the co-freeze. - D8 rider: digestThroughPacked(g) — deterministic crc32c chain over sealed-segment checksums (+ frame-level prefix mid-segment), O(segments), reopen-stable. Also fixes a cross-adapter contract bug the suite caught: memory storage's deleteObjectFromPath ignored the raw-bytes store, so deleteRawObject on a raw-bytes path (fact-log or segment files) silently no-op'd — deletes now match filesystem unlink semantics. Six pins. Wiring into GenerationStore (two-tier reads, the repacker, cold-open manifest path) lands with the rest of the unit before its release; cortex's fact-record/stamp shapes reconcile the sidecar keying when they post.
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})