brainy/docs
David Snelling a3467e1f9b feat: temporal VFS — file content joins the Model-B immutability model
The temporal model had a hole exactly where files were concerned: every
entity write is an immutable generation with before-images, but VFS content
BYTES lived under an eager refCount GC left over from the pre-8.0 design —
unlink could physically destroy bytes that in-window history still
referenced, and overwrite never released the old hash at all (an unbounded
silent leak whose accidental byproduct was the only thing "preserving"
history). Reading the past could therefore return a stale field, a dangling
hash, or nothing, depending on luck.

Fix: blob reclamation becomes a HISTORY decision instead of a LIVENESS
decision. Each blob's metadata now carries historyRefCount alongside the
live refCount:

- The commit seam counts one history reference per persisted before-image
  record carrying a content hash (commitTransaction staging and the
  group-commit flush), recorded BEFORE the record-set persists and carried
  in the generation delta (blobHashes — always present on new deltas, so
  compaction only falls back to reading records for pre-contract
  generations). An aborted transaction compensates best-effort.
- unlink/rmdir/overwrite drop ONLY the live reference (BlobStorage.delete →
  release; overwrite finally releases the superseded hash — cancelling the
  dedup increment on same-content rewrites and closing the leak), and only
  AFTER the canonical mutation commits, so a failed delete can never leave a
  live file whose bytes compaction might reclaim.
- History compaction is the ONE reclamation point: after deleting a
  generation's record-set it releases that set's references and physically
  reclaims any hash at zero live AND zero history references. Pins are
  exempt automatically. Crash ordering is over-count-only in every path
  (record before persist, release after delete), so a crash can leak until
  the scrub recounts but can never reclaim bytes a retained generation
  needs. scrubBlobHistoryRefCounts() restores exactness; existing stores get
  a one-time marker-gated backfill on open, failing into leak-safe mode
  (reclamation disabled) rather than guessing.

On top of the protected history, the temporal API the generational model
always implied:

- vfs.readFile(path, { asOf }) — the exact bytes as of a generation or Date,
  materialized from the history (pinned view released so compaction is
  never blocked by a read).
- vfs.history(path) — FileVersion[] ascending ({ generation, timestamp,
  hash, size, mimeType? }), the newest entry being the live state.
- Overwrites now refresh the file entity's data/embedding text — semantic
  search and the data field previously served the FIRST version's text
  forever (the stale-field defect a consumer's incident recovery depended
  on by luck).

Integration suite (temporal-vfs.test.ts): per-version exact reads +
history listing, leak-fix + history protection on overwrite, rm keeps bytes
readable, compaction reclaims past-window bytes and preserves in-window
(including the cross-file dedup case where an old file's history and a
newer file's removal share one hash), data freshness, and scrub exactness.
2026-07-10 16:43:48 -07:00
..
api refactor(8.0): remove the 4 deprecated query-operator aliases (clean break) 2026-06-29 10:29:20 -07:00
architecture docs: correct rc-era time-travel staleness + record the embedding-model ordering constraint 2026-07-07 10:39:00 -07:00
concepts docs: rename the native provider to @soulcraft/cor across public docs and JSDoc 2026-07-02 15:11:41 -07:00
guides feat: temporal VFS — file content joins the Model-B immutability model 2026-07-10 16:43:48 -07:00
operations feat(8.0): API simplification — remove neural()/Db.search, one storage path key, integration→0 2026-06-20 13:31:11 -07:00
vfs refactor(8.0): remove the 4 deprecated query-operator aliases (clean break) 2026-06-29 10:29:20 -07:00
ADR-001-generational-mvcc.md feat(8.0): Model-B per-write generation-stamping + adaptive retention knob 2026-06-22 15:19:58 -07:00
BATCHING.md docs(8.0): correct public docs to the real 8.0 API + honest perf claims 2026-06-29 10:03:02 -07:00
DATA_MODEL.md chore(8.0): final pre-RC1 sweep — API consistency, named errors, orphans, zero-cast codebase 2026-06-11 14:51:00 -07:00
DEVELOPER_LEARNING_PATH.md feat(8.0): API simplification — remove neural()/Db.search, one storage path key, integration→0 2026-06-20 13:31:11 -07:00
eli5.md docs: rename the native provider to @soulcraft/cor across public docs and JSDoc 2026-07-02 15:11:41 -07:00
FIND_SYSTEM.md docs(8.0): correct public docs to the real 8.0 API + honest perf claims 2026-06-29 10:03:02 -07:00
MIGRATION-V3-TO-V4.md refactor(8.0)!: remove distributed clustering subsystem — inert/orphaned, scale is single-process + native provider 2026-06-15 10:37:39 -07:00
neural-extraction.md feat: queryAggregate() + HAVING, plus aggregate backfill, traversal depth/via, extraction typing (BR-ADV-FEATURES-BUN) 2026-05-26 13:55:43 -07:00
PERFORMANCE.md docs: rename the native provider to @soulcraft/cor across public docs and JSDoc 2026-07-02 15:11:41 -07:00
PLUGINS.md docs: pin the write-path invariant in the plugin contract (the onChange change-feed guarantee) 2026-07-10 11:30:00 -07:00
PRODUCTION_SERVICE_ARCHITECTURE.md chore(8.0): modernize toolchain + position Bun as a runtime 2026-07-01 09:16:46 -07:00
QUERY_OPERATORS.md docs: rename the native provider to @soulcraft/cor across public docs and JSDoc 2026-07-02 15:11:41 -07:00
README.md refactor(8.0)!: remove distributed clustering subsystem — inert/orphaned, scale is single-process + native provider 2026-06-15 10:37:39 -07:00
RELEASE-GUIDE.md docs: correct rc-era time-travel staleness + record the embedding-model ordering constraint 2026-07-07 10:39:00 -07:00
SCALING.md docs: rename the native provider to @soulcraft/cor across public docs and JSDoc 2026-07-02 15:11:41 -07:00
STAGE3-CANONICAL-TAXONOMY.md fix: exclude __words__ keyword index from corruption detection and getStats() 2026-01-27 15:38:21 -08:00
transactions.md feat(8.0): API simplification — remove neural()/Db.search, one storage path key, integration→0 2026-06-20 13:31:11 -07:00
troubleshooting.md feat(8.0): API simplification — remove neural()/Db.search, one storage path key, integration→0 2026-06-20 13:31:11 -07:00
universal-display-augmentation.md feat(8.0): API simplification — remove neural()/Db.search, one storage path key, integration→0 2026-06-20 13:31:11 -07:00

Brainy Documentation

The multi-dimensional AI database with Triple Intelligence — vector search, graph traversal, and metadata filtering in one unified API.

Quick Start

import { Brainy, NounType, VerbType } from '@soulcraft/brainy'

const brain = new Brainy()
await brain.init()

// Add entities — data is embedded for semantic search, metadata is indexed for filtering
const id = await brain.add({
  data: 'Revolutionary AI Breakthrough',
  type: NounType.Document,
  metadata: { category: 'technology', rating: 4.8 }
})

// Search with Triple Intelligence
const results = await brain.find({
  query: 'artificial intelligence',              // Semantic search (on data)
  where: { rating: { greaterThan: 4.0 } },       // Metadata filter
  connected: { from: authorId, depth: 2 }         // Graph traversal
})

Core Documentation

Document Description
API Reference Complete API documentation — start here
Data Model Entity structure, data vs metadata, storage fields
Query Operators All BFO operators with examples and indexed/in-memory matrix
Find System Natural language find() and hybrid search details
Consistency Model The Db API guarantees — snapshot isolation, atomic transactions, time travel

Architecture

Document Description
Architecture Overview High-level system design
Triple Intelligence Vector + Graph + Metadata unified query
Noun-Verb Taxonomy 42 nouns + 127 verbs type system
Stage 3 Canonical Taxonomy Complete type reference
Storage Architecture Storage adapters and optimization
Index Architecture Vector, Graph, and Metadata indexing
Zero Configuration Auto-adapts to any environment

Virtual Filesystem (VFS)

Document Description
VFS Quick Start Get started in 30 seconds
VFS Core Core concepts and architecture
VFS API Guide Complete VFS API reference
Common Patterns VFS usage patterns

See vfs/ for the complete VFS documentation set.


Guides

Document Description
Import Anything CSV, Excel, PDF, URL imports
Snapshots & Time Travel Backups, restore, what-if analysis, audit trails
Natural Language Query in plain English
Neural API AI-powered features
Enterprise for Everyone No limits, no tiers
Framework Integration React, Vue, Angular, Svelte

Storage & Deployment

Document Description
Storage Architecture Filesystem and memory adapters, on-disk artifact layout, operator-layer backup
Capacity Planning Scale to millions of entities

Plugins

Document Description
Plugins Plugin system overview — providers, plugins config, brain.use()

Performance & Scaling

Document Description
Performance Optimization techniques
Scaling Scale to billions of entities
Batching Batch operations guide

Migration & Reference

Document Description
v3 to v4 Migration Upgrade guide
Release Guide How to release new versions
Production Architecture Ops reference

Internal

Document Description
Audit Report Feature audit
Honest Status Actual implementation status

License

Brainy is MIT licensed. See LICENSE for details.