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David Snelling 42ae5be455 feat: ID-first storage architecture + remove memory-unsafe APIs (v6.0.0) 
BREAKING CHANGES:

**ID-First Storage Paths**
- Direct O(1) entity access without type lookups
- Before: entities/nouns/{TYPE}/metadata/{SHARD}/{ID}.json
- After:  entities/nouns/{SHARD}/{ID}/metadata.json
- Migration handled automatically on first init()

**Removed Memory-Unsafe APIs**
- Removed brain.merge() - loaded all entities into memory
- Removed brain.diff() - loaded all entities into memory
- Removed brain.data().backup() - loaded all entities into memory
- Removed brain.data().restore() - depended on backup()
- Removed CLI commands: backup, restore, cow merge

**Migration Paths**
- merge() → Use checkout() or manually copy entities with pagination
- diff() → Use asOf() with manual paginated comparison
- backup() → Use fork() for instant COW snapshots
- restore() → Use checkout() to switch to snapshot branch

Core Improvements:
- ✅ All 8 storage adapters properly call super.init()
- ✅ GraphAdjacencyIndex integration in BaseStorage.init()
- ✅ Fixed ID-first path bugs (vector.json → vectors.json)
- ✅ Fixed MemoryStorage.initializeCounts() for ID-first paths
- ✅ New VFS APIs: du(), access(), find()
- ✅ Comprehensive documentation with migration guides

Storage Adapters Fixed:
- MemoryStorage, FileSystemStorage, AzureBlobStorage
- GCSStorage, R2Storage, S3CompatibleStorage
- OPFSStorage, HistoricalStorageAdapter

Files Changed: 28 files, +1,075/-1,933 lines (net -858)

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
2025-11-19 16:46:11 -08:00
..
api feat: Brainy 3.0 - Production-ready Triple Intelligence database 2025-09-11 16:23:32 -07:00
augmentations/intelligentImport feat: add intelligent import for CSV, Excel, and PDF files 2025-10-01 16:51:03 -07:00
benchmarks feat: remove legacy ImportManager, standardize getStats() API 2025-10-09 11:40:31 -07:00
comprehensive feat: Stage 3 CANONICAL taxonomy with 169 types (v5.5.0) 2025-11-06 09:02:23 -08:00
configs feat: ID-first storage architecture + remove memory-unsafe APIs (v6.0.0) 2025-11-19 16:46:11 -08:00
fixtures/import feat: add intelligent import for CSV, Excel, and PDF files 2025-10-01 16:51:03 -07:00
helpers fix: critical blob integrity regression with defense-in-depth architecture (v5.10.1) 2025-11-14 15:31:06 -08:00
integration feat: add storage-level batch operations to eliminate N+1 query patterns 2025-11-19 08:59:11 -08:00
manual fix: update tests for v5.1.0 API changes (VFS auto-init + property access) 2025-11-02 11:38:12 -08:00
performance fix: update all Stage 2 references to Stage 3 CANONICAL type counts 2025-11-06 09:40:33 -08:00
regression fix: resolve v5.7.0 deadlock by restoring storage layer separation (v5.7.1) 2025-11-11 15:24:43 -08:00
scripts feat: Brainy 3.0 - Production-ready Triple Intelligence database 2025-09-11 16:23:32 -07:00
transaction feat: add v5.8.0 features - transactions, pagination, and comprehensive docs 2025-11-14 10:26:23 -08:00
unit feat: brain.get() metadata-only optimization - Phase 2 (testing) 2025-11-18 15:41:57 -08:00
vfs feat: ID-first storage architecture + remove memory-unsafe APIs (v6.0.0) 2025-11-19 16:46:11 -08:00
brainy-3.test.ts feat: brain.get() metadata-only optimization - Phase 2 (testing) 2025-11-18 15:41:57 -08:00
critical-error-handling.test.ts feat: Brainy 3.0 - Production-ready Triple Intelligence database 2025-09-11 16:23:32 -07:00
critical-neural-validation.test.ts feat: Brainy 3.0 - Production-ready Triple Intelligence database 2025-09-11 16:23:32 -07:00
critical-performance-benchmark.test.ts feat: Brainy 3.0 - Production-ready Triple Intelligence database 2025-09-11 16:23:32 -07:00
distributed-demo.test.ts feat: Brainy 3.0 - Production-ready Triple Intelligence database 2025-09-11 16:23:32 -07:00
model-loading.test.ts 🧠 Brainy 2.0.0 - Zero-Configuration AI Database with Triple Intelligence™ 2025-08-26 12:32:21 -07:00
opfs-storage.test.ts 🧠 Brainy 2.0.0 - Zero-Configuration AI Database with Triple Intelligence™ 2025-08-26 12:32:21 -07:00
package-size-breakdown.test.ts 🧠 Brainy 2.0.0 - Zero-Configuration AI Database with Triple Intelligence™ 2025-08-26 12:32:21 -07:00
package-size-limit.test.ts 🧠 Brainy 2.0.0 - Zero-Configuration AI Database with Triple Intelligence™ 2025-08-26 12:32:21 -07:00
setup-integration.ts 🧠 Brainy 2.0.0 - Zero-Configuration AI Database with Triple Intelligence™ 2025-08-26 12:32:21 -07:00
setup-unit.ts 🧠 Brainy 2.0.0 - Zero-Configuration AI Database with Triple Intelligence™ 2025-08-26 12:32:21 -07:00
setup.ts 🧠 Brainy 2.0.0 - Zero-Configuration AI Database with Triple Intelligence™ 2025-08-26 12:32:21 -07:00
streaming-pipeline.test.ts feat: Brainy 3.0 - Production-ready Triple Intelligence database 2025-09-11 16:23:32 -07:00
type-utils.test.ts 🧠 Brainy 2.0.0 - Zero-Configuration AI Database with Triple Intelligence™ 2025-08-26 12:32:21 -07:00
typeAwareHNSWIndex.test.ts feat: Phase 2 Type-Aware HNSW - 87% memory reduction @ billion scale 2025-10-15 15:39:28 -07:00
typeAwareQueryPlanner.test.ts fix: update all Stage 2 references to Stage 3 CANONICAL type counts 2025-11-06 09:40:33 -08:00