brainy/tests/integration
David Snelling a3467e1f9b feat: temporal VFS — file content joins the Model-B immutability model
The temporal model had a hole exactly where files were concerned: every
entity write is an immutable generation with before-images, but VFS content
BYTES lived under an eager refCount GC left over from the pre-8.0 design —
unlink could physically destroy bytes that in-window history still
referenced, and overwrite never released the old hash at all (an unbounded
silent leak whose accidental byproduct was the only thing "preserving"
history). Reading the past could therefore return a stale field, a dangling
hash, or nothing, depending on luck.

Fix: blob reclamation becomes a HISTORY decision instead of a LIVENESS
decision. Each blob's metadata now carries historyRefCount alongside the
live refCount:

- The commit seam counts one history reference per persisted before-image
  record carrying a content hash (commitTransaction staging and the
  group-commit flush), recorded BEFORE the record-set persists and carried
  in the generation delta (blobHashes — always present on new deltas, so
  compaction only falls back to reading records for pre-contract
  generations). An aborted transaction compensates best-effort.
- unlink/rmdir/overwrite drop ONLY the live reference (BlobStorage.delete →
  release; overwrite finally releases the superseded hash — cancelling the
  dedup increment on same-content rewrites and closing the leak), and only
  AFTER the canonical mutation commits, so a failed delete can never leave a
  live file whose bytes compaction might reclaim.
- History compaction is the ONE reclamation point: after deleting a
  generation's record-set it releases that set's references and physically
  reclaims any hash at zero live AND zero history references. Pins are
  exempt automatically. Crash ordering is over-count-only in every path
  (record before persist, release after delete), so a crash can leak until
  the scrub recounts but can never reclaim bytes a retained generation
  needs. scrubBlobHistoryRefCounts() restores exactness; existing stores get
  a one-time marker-gated backfill on open, failing into leak-safe mode
  (reclamation disabled) rather than guessing.

On top of the protected history, the temporal API the generational model
always implied:

- vfs.readFile(path, { asOf }) — the exact bytes as of a generation or Date,
  materialized from the history (pinned view released so compaction is
  never blocked by a read).
- vfs.history(path) — FileVersion[] ascending ({ generation, timestamp,
  hash, size, mimeType? }), the newest entry being the live state.
- Overwrites now refresh the file entity's data/embedding text — semantic
  search and the data field previously served the FIRST version's text
  forever (the stale-field defect a consumer's incident recovery depended
  on by luck).

Integration suite (temporal-vfs.test.ts): per-version exact reads +
history listing, leak-fix + history protection on overwrite, rm keeps bytes
readable, compaction reclaims past-window bytes and preserves in-window
(including the cross-file dedup case where an old file's history and a
newer file's removal share one hash), data freshness, and scrub exactness.
2026-07-10 16:43:48 -07:00
..
advanced-apis-regression.test.ts feat(8.0)!: flip requireSubtype default to true (BRAINY-8.0-SUBTYPE-CONTRACT § C-1) 2026-06-09 14:58:25 -07:00
aggregation-delete.test.ts feat(8.0): id-normalization (#18) + aggregation min/max delete-safety + RC-safe release 2026-06-20 14:46:40 -07:00
aggregation.test.ts chore(8.0): final pre-RC1 sweep — API consistency, named errors, orphans, zero-cast codebase 2026-06-11 14:51:00 -07:00
all-apis-comprehensive.test.ts feat(8.0): API simplification — remove neural()/Db.search, one storage path key, integration→0 2026-06-20 13:31:11 -07:00
api-parameter-validation.test.ts feat(8.0)!: flip requireSubtype default to true (BRAINY-8.0-SUBTYPE-CONTRACT § C-1) 2026-06-09 14:58:25 -07:00
batchImportWithRelations.test.ts feat(8.0): reserved-field enforcement — reservedFieldPolicy defaults to throw 2026-06-20 15:37:21 -07:00
brainy-complete.integration.test.ts test(8.0): integration rot pass — 77→17 failures (parallel per-file hardening) 2026-06-17 13:11:41 -07:00
brainy-core.integration.test.ts test(8.0): integration rot pass — 77→17 failures (parallel per-file hardening) 2026-06-17 13:11:41 -07:00
brainy-phase1c-integration.test.ts feat(8.0): API simplification — remove neural()/Db.search, one storage path key, integration→0 2026-06-20 13:31:11 -07:00
bun-runtime-test.ts chore(8.0): modernize toolchain + position Bun as a runtime 2026-07-01 09:16:46 -07:00
clear-persistence.test.ts feat(8.0): API simplification — remove neural()/Db.search, one storage path key, integration→0 2026-06-20 13:31:11 -07:00
clear-vfs.test.ts docs(8.0): consistency-model concept + snapshots guide — Db API replaces branching docs 2026-06-11 08:37:26 -07:00
cold-graph-connected-8.0.test.ts fix(8.0): never serve a silent [] from find({connected}) on a cold-loaded graph 2026-06-30 09:30:11 -07:00
cortex-compat.test.ts feat(8.0)!: flip requireSubtype default to true (BRAINY-8.0-SUBTYPE-CONTRACT § C-1) 2026-06-09 14:58:25 -07:00
count-synchronization.test.ts test(8.0): close brains in afterEach (count-sync, get-relations teardown) 2026-06-16 13:18:14 -07:00
db-asof-vector-defer.test.ts feat(8.0): #35 part-3 — supply at-gen candidate vectors for the native exact-rerank 2026-06-23 16:50:41 -07:00
db-mvcc.test.ts fix(8.0): restore() reloads a native entity-id mapper before graphIndex.rebuild() 2026-06-23 12:02:17 -07:00
db-temporal.test.ts refactor(8.0): API-surface + quality polish from the readiness audit 2026-06-29 10:04:19 -07:00
entity-confidence-weight.test.ts feat(8.0)!: flip requireSubtype default to true (BRAINY-8.0-SUBTYPE-CONTRACT § C-1) 2026-06-09 14:58:25 -07:00
find-limits.test.ts feat(8.0)!: flip requireSubtype default to true (BRAINY-8.0-SUBTYPE-CONTRACT § C-1) 2026-06-09 14:58:25 -07:00
find-triple-composition.test.ts test(8.0): asOf() error-path spot-checks + find() triple-composition correctness + scale-bench harness 2026-06-15 11:55:26 -07:00
find-unified-integration.test.ts feat(8.0): id-normalization (#18) + aggregation min/max delete-safety + RC-safe release 2026-06-20 14:46:40 -07:00
find-where-zero.test.ts feat(8.0): API simplification — remove neural()/Db.search, one storage path key, integration→0 2026-06-20 13:31:11 -07:00
get-relations-fix.test.ts test(8.0): close brains in afterEach (count-sync, get-relations teardown) 2026-06-16 13:18:14 -07:00
graphIndex-pagination.test.ts chore(8.0): final pre-RC1 sweep — API consistency, named errors, orphans, zero-cast codebase 2026-06-11 14:51:00 -07:00
hnsw-rebuild.test.ts feat(8.0): API simplification — remove neural()/Db.search, one storage path key, integration→0 2026-06-20 13:31:11 -07:00
hybrid-search-vfs.test.ts feat(8.0)!: delete fork/branch/commit/history/versions — superseded by the Db API 2026-06-10 15:22:47 -07:00
id-normalization.test.ts feat(8.0): id-normalization (#18) + aggregation min/max delete-safety + RC-safe release 2026-06-20 14:46:40 -07:00
ifabsent-upsert-blob-concurrency.test.ts feat: temporal VFS — file content joins the Model-B immutability model 2026-07-10 16:43:48 -07:00
ifrev-concurrent-cas.test.ts fix: ifRev CAS is atomic — the revision check now runs under the commit mutex 2026-07-08 14:53:34 -07:00
memory-enhancements-v5.11.0.test.ts test(8.0): integration rot pass — 77→17 failures (parallel per-file hardening) 2026-06-17 13:11:41 -07:00
metadata-only-comprehensive.test.ts feat(8.0): API simplification — remove neural()/Db.search, one storage path key, integration→0 2026-06-20 13:31:11 -07:00
metadata-vector-exclusion.test.ts test(8.0): integration rot pass — 77→17 failures (parallel per-file hardening) 2026-06-17 13:11:41 -07:00
migration-7x-to-8x.test.ts fix: 7→8 migration preserves branch-scoped non-entity state instead of deleting it 2026-07-07 16:07:10 -07:00
migration-backup.test.ts fix(8.0): byte-copy _id_mapper/* in the pre-upgrade backup (cor's write-new nuance) 2026-07-02 13:35:43 -07:00
migration.test.ts test(8.0): integration rot pass — 77→17 failures (parallel per-file hardening) 2026-06-17 13:11:41 -07:00
multi-process-safety.test.ts feat(8.0): API simplification — remove neural()/Db.search, one storage path key, integration→0 2026-06-20 13:31:11 -07:00
onchange-feed.test.ts feat: brain.onChange — the in-process change feed for every committed mutation 2026-07-10 11:24:31 -07:00
orderby-sort-bug.test.ts feat(8.0)!: flip requireSubtype default to true (BRAINY-8.0-SUBTYPE-CONTRACT § C-1) 2026-06-09 14:58:25 -07:00
readAfterWrite.test.ts chore(8.0): final pre-RC1 sweep — API consistency, named errors, orphans, zero-cast codebase 2026-06-11 14:51:00 -07:00
relationship-intelligence.test.ts chore(8.0): final pre-RC1 sweep — API consistency, named errors, orphans, zero-cast codebase 2026-06-11 14:51:00 -07:00
remaining-apis.test.ts feat(8.0): reserved-field enforcement — reservedFieldPolicy defaults to throw 2026-06-20 15:37:21 -07:00
rev-and-ifabsent.test.ts feat(8.0)!: flip requireSubtype default to true (BRAINY-8.0-SUBTYPE-CONTRACT § C-1) 2026-06-09 14:58:25 -07:00
savebinaryblob-concurrent-rename.test.ts fix: saveBinaryBlob unique tmp suffix + ENOENT swallow on rename 2026-06-09 10:36:02 -07:00
smart-import.test.ts test(8.0): integration rot pass — 77→17 failures (parallel per-file hardening) 2026-06-17 13:11:41 -07:00
storage-batch-operations.test.ts feat(8.0)!: delete fork/branch/commit/history/versions — superseded by the Db API 2026-06-10 15:22:47 -07:00
strict-mode-self-test.test.ts feat(8.0): brain.fillSubtypes migration helper + pre-RC1 gap closure 2026-06-11 10:53:55 -07:00
subtype-and-facets.test.ts chore(8.0): final pre-RC1 sweep — API consistency, named errors, orphans, zero-cast codebase 2026-06-11 14:51:00 -07:00
temporal-vfs.test.ts feat: temporal VFS — file content joins the Model-B immutability model 2026-07-10 16:43:48 -07:00
update-asymmetry.test.ts feat(8.0)!: flip requireSubtype default to true (BRAINY-8.0-SUBTYPE-CONTRACT § C-1) 2026-06-09 14:58:25 -07:00
vector-recall.test.ts test(8.0): A/B benchmark harness (open leg) — generic corpus+metrics lib, brainy-alone scaling bench, boundary guard, real-embedding recall guard 2026-06-15 15:51:17 -07:00
verb-subtype-and-enforcement.test.ts test(8.0): integration rot pass — 77→17 failures (parallel per-file hardening) 2026-06-17 13:11:41 -07:00
vfs-and-graph-entities.test.ts test(8.0): integration rot pass — 77→17 failures (parallel per-file hardening) 2026-06-17 13:11:41 -07:00
vfs-api-wiring.test.ts feat(8.0): API simplification — remove neural()/Db.search, one storage path key, integration→0 2026-06-20 13:31:11 -07:00
vfs-cow-blob-adoption.test.ts fix: recover VFS content blobs stranded by a 7→8 upgrade, in place on open 2026-07-07 12:23:36 -07:00
vfs-debug.test.ts feat(8.0)!: flip requireSubtype default to true (BRAINY-8.0-SUBTYPE-CONTRACT § C-1) 2026-06-09 14:58:25 -07:00
vfs-import-verification.test.ts test(8.0): integration rot pass — 77→17 failures (parallel per-file hardening) 2026-06-17 13:11:41 -07:00
vfs-knowledge-separation.test.ts feat(8.0): API simplification — remove neural()/Db.search, one storage path key, integration→0 2026-06-20 13:31:11 -07:00
vfs-performance-v5.11.1.test.ts feat(8.0): API simplification — remove neural()/Db.search, one storage path key, integration→0 2026-06-20 13:31:11 -07:00
wasm-embeddings.test.ts feat: migrate embeddings to Candle WASM + remove semantic type inference 2026-01-06 12:52:34 -08:00