Commit graph

24 commits

Author SHA1 Message Date
f024e56ee7 feat: add aggregation engine with incremental SUM/COUNT/AVG/MIN/MAX, GROUP BY, and time windows
Add a write-time incremental aggregation engine that maintains running
totals on every add/update/delete for O(1) read performance. Integrates
into brain.find({ aggregate }) for a unified query API.

Core features:
- AggregationIndex with defineAggregate()/removeAggregate() API
- Five aggregation operations: SUM, COUNT, AVG, MIN, MAX
- GROUP BY with multiple dimensions including time windows
- Time window bucketing: hour, day, week, month, quarter, year, custom
- Materialization of results as NounType.Measurement entities
- Debounced persistence of definitions and state to storage
- Definition change detection via FNV-1a hashing with auto-rebuild
- Infinite loop prevention for materialized entities
- 'aggregation' plugin provider key for native acceleration
- Lazy initialization (created on first defineAggregate() call)
- 73 tests (unit + integration) covering all functionality

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
2026-02-16 16:57:53 -08:00
7f9d2a70a5 feat: update plugin references from @soulcraft/brainy-cortex to @soulcraft/cortex 2026-02-01 08:22:07 -08:00
1513e297ef feat: wire plugin system with provider resolution, storage factories, and browser deprecation
- Wire PluginRegistry into Brainy init() with provider resolution for distance,
  metadataIndex, graphIndex, embeddings, roaring, msgpack, and storage adapters
- Add setupStorage() factory that resolves storage:* providers from plugins before
  falling back to built-in createStorage()
- Export internals API (setGlobalCache, UnifiedCache, EntityIdMapper, etc.) for
  cortex plugin consumption
- Add plugin.test.ts verifying registration, activation, and provider resolution
- Deprecate browser support (OPFS, Web Workers, WASM embeddings) with warnings
  in preparation for v8.0 server-only release
- FileSystemStorage: fix setupStorage resolution for mmap-filesystem provider
2026-01-31 12:02:13 -08:00
f8dd93c93c fix: cancel abandoned highlight() semantic work and harden WASM engine recovery
highlight() used Promise.race with a 10s timeout, but the losing
semantic phase promise continued running 25 WASM micro-batches,
saturating the event loop and degrading all subsequent operations
(find() going from ~200ms to ~10,000ms).

Add AbortController to highlight() so the semantic phase stops
immediately on timeout or error. Pass abort signal through
embedBatch() → EmbeddingManager → micro-batch loop.

Also add defensive hardening:
- CandleEmbeddingEngine: try/catch around WASM calls resets engine
  state on failure so next call triggers re-initialization
- WASMEmbeddingEngine: initialize() now checks underlying Candle
  engine state, not just its own flag, completing the recovery chain
2026-01-27 18:26:37 -08:00
bf71317d21 fix: prevent WASM embedding from blocking event loop during highlight()
embedBatch() with large inputs (e.g. 500 chunks from highlight()) runs
a single synchronous WASM forward pass that blocks the event loop for
200-500ms. Split large batches into micro-batches of 20 with setTimeout(0)
yields between each, keeping max blocking per batch to ~10-30ms.

Also change Cargo.toml opt-level from "z" (size) to 3 (speed) for
~15-20% faster WASM inference. Requires WASM rebuild to take effect.
2026-01-27 16:49:26 -08:00
364360d447 fix: exclude __words__ keyword index from corruption detection and getStats()
The __words__ keyword index stores 50-5000 entries per entity (one per
word), which inflated avg entries/entity well above the corruption
threshold of 100. This caused:

1. validateConsistency() to falsely detect corruption on every startup,
   triggering unnecessary clearAllIndexData() + rebuild() cycles
2. getStats() to log false "Metadata index may be corrupted" warnings
   and report inflated totalEntries/totalIds stats

Both methods now skip __words__ when counting, so stats and health
checks reflect metadata fields only (noun, type, createdAt, etc.).
Keyword search is unaffected since the __words__ field index itself
is not modified.
2026-01-27 15:38:21 -08:00
cca1cd8ce2 feat: add structured content extraction and batch embedding optimization to highlight()
Fix highlight() hanging on structured text input by addressing 3 root causes:

1. embedBatch() now uses native WASM batch API (single forward pass instead
   of N individual embed() calls via Promise.all)

2. highlight() auto-detects content type (plain text, rich-text JSON, HTML,
   Markdown) and extracts meaningful text segments. Supports TipTap, Slate.js,
   Lexical, Draft.js, and Quill Delta formats. New contentType hint and
   contentExtractor callback for custom parsers.

3. Semantic matching phase has 10s timeout - falls back to text-only matches
   instead of hanging indefinitely.

Also fixes extractTextContent() array check: uses type-based detection
(typeof data[0] === 'number') instead of length-based (data.length > 10)
so arrays of objects are properly indexed for text search.

New types: ContentType, ContentCategory, ExtractedSegment
New fields: HighlightParams.contentType, HighlightParams.contentExtractor,
            Highlight.contentCategory
2026-01-27 10:27:22 -08:00
e62e74819e fix: bun --compile model loading with fallback paths
In bun --compile binaries, import.meta.url resolves to virtual paths.
Added fallback strategies to find model assets:

1. Pre-resolved paths (Bun runtime)
2. ./node_modules/@soulcraft/brainy/assets/ (npm installed)
3. ./assets/ (local development)

For Docker/Cloud Run deployment:
- Copy assets folder alongside binary
- Or keep node_modules structure

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-06 18:00:37 -08:00
677e2d6624 perf: 580x faster embedding init - separate model from WASM
Cloud Run cold starts taking 139 seconds due to 90MB WASM file with
embedded 87MB model weights. WASM compilation scales with file size.

Solution: Split into 2.4MB WASM (code only) + external model files.
- WASM compile: 139,000ms → 6-8ms
- Model load: N/A → 30-115ms
- Total init: 139,000ms → 136-240ms

New modelLoader.ts handles all environments:
- Node.js: fs.readFile()
- Bun: Bun.file()
- Bun --compile: auto-embedded assets
- Browser: fetch()

Zero config - same API, npm package includes model files.

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-06 17:18:58 -08:00
5d9ec5bb16 fix: resolve WASM loading for Bun --compile single-binary executables
Both roaring-wasm and candle-wasm now work correctly in all environments:
- Node.js (fs.readFileSync)
- Bun runtime (Bun.file)
- Bun --compile (embedded assets via import { type: 'file' })
- Browser (fetch)

roaring-wasm:
- Created src/utils/roaring/index.ts wrapper
- Uses browser bundle which has WASM embedded as base64
- Top-level await ensures initialization before use
- Zero environment detection needed (works everywhere)

candle-wasm:
- Created src/embeddings/wasm/wasmLoader.ts universal loader
- Uses Bun's import { type: 'file' } to embed 93MB WASM in compiled binary
- Fixed browser detection (Bun defines 'self', check for 'document' instead)
- Simplified CandleEmbeddingEngine.ts to use wasmLoader

Binary size verification:
- Minimal Bun binary: 100MB (runtime only)
- Brainy binary: 199MB (100MB runtime + 93MB WASM + 6MB JS)
- No duplication: WASM embedded exactly once

Test results:
- Node.js: 1190/1190 tests pass
- Bun runtime: 8/8 tests pass
- Bun --compile: 8/8 tests pass

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-06 14:09:02 -08:00
da7d2ed29d feat: migrate embeddings to Candle WASM + remove semantic type inference
Major architectural changes:

1. EMBEDDINGS ENGINE (ONNX → Candle WASM):
   - Replace ONNX Runtime with Rust Candle compiled to WASM
   - Embedded model in WASM binary (no external downloads)
   - Quantized Q8 precision with <50MB memory footprint
   - Zero-download, offline-first operation
   - Same embedding quality (all-MiniLM-L6-v2)

2. REMOVE SEMANTIC TYPE INFERENCE:
   - Delete embeddedKeywordEmbeddings.ts (14MB of pre-computed embeddings)
   - Remove typeAwareQueryPlanner.ts and semanticTypeInference.ts
   - Remove VerbExactMatchSignal (uses keyword embeddings)
   - Update SmartRelationshipExtractor to 3 signals (55%/30%/15% weights)

API CHANGES (requires v7.0.0):
- Removed: inferTypes(), inferNouns(), inferVerbs(), inferIntent()
- Removed: getSemanticTypeInference(), SemanticTypeInference class
- Removed: TypeInference, SemanticTypeInferenceOptions types

Users can still use natural language queries in find() - they just
need to specify type explicitly for type-optimized searches.

PACKAGE SIZE IMPACT:
- Compressed: 90.1 MB → 86.2 MB (-4.3%)
- Uncompressed: 114.4 MB → 100.3 MB (-12%)
- ~448K lines of code removed

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
2026-01-06 12:52:34 -08:00
1f59aa2013 feat: replace transformers.js with direct ONNX WASM for Bun compatibility
- Remove @huggingface/transformers dependency (539MB native binaries)
- Add direct ONNX Runtime Web embedding engine
- Bundle all-MiniLM-L6-v2-q8 model (24MB, no runtime downloads)
- Works with Node.js, Bun, and bun build --compile
- Air-gap compatible: fully self-contained, no internet required

New WASM embedding components:
- WASMEmbeddingEngine: Main integration class
- WordPieceTokenizer: Pure TypeScript tokenizer
- EmbeddingPostProcessor: Mean pooling + L2 normalization
- ONNXInferenceEngine: Direct ONNX Runtime Web wrapper
- AssetLoader: Model file loading

Tests added:
- 11 WASM embedding integration tests
- 8 Bun compatibility tests

New npm scripts:
- test:wasm - Run WASM embedding tests
- test:bun - Run tests with Bun
- test:bun:compile - Build and run compiled binary
2025-12-17 17:42:37 -08:00
92c96246fb feat(v4.0.0): Complete metadata/vector separation architecture with Azure support
This commit completes the core v4.0.0 architecture changes for billion-scale
performance with metadata/vector separation. NO RELEASE YET - remaining optimizations
and testing required before production release.

## Core v4.0.0 Architecture Changes

### Type System Updates
- Fixed all TypeScript compilation errors (zero errors achieved)
- Updated HNSWNoun/HNSWVerb to separate core fields from metadata
- Implemented HNSWNounWithMetadata/HNSWVerbWithMetadata for API boundaries
- Added required 'noun' field to NounMetadata for semantic structure
- Renamed verb.type to verb.verb for consistency

### Storage Adapter Updates
**All adapters updated for v4.0.0 two-file storage pattern:**
- memoryStorage: Proper metadata/vector separation
- fileSystemStorage: Two-file pattern with sharding
- opfsStorage: Browser persistent storage updated
- s3CompatibleStorage: AWS/MinIO/DigitalOcean support
- r2Storage: Cloudflare R2 optimization
- gcsStorage: Google Cloud with ADC support
- **azureBlobStorage: NEW - Full Azure Blob Storage support**

### Storage Features
- BaseStorage: Internal vs public method separation (_getNoun vs getNoun)
- Two-file storage: Vectors in one file, metadata in another
- Change tracking: getChangesSince return type updated
- Pagination: getNounsWithPagination returns WithMetadata types

### Azure Blob Storage Integration (NEW)
- Native @azure/storage-blob SDK integration
- Four authentication methods:
  * DefaultAzureCredential (Managed Identity) - recommended
  * Connection String - simplest setup
  * Account Name + Key - traditional auth
  * SAS Token - delegated access
- High-volume mode with write buffering
- Adaptive backpressure for throttling
- UUID-based sharding for billion-scale
- Full HNSW support with graph persistence

### Utility Updates
- EmbeddingManager: Updated to accept Record<string, unknown>
- LSMTree: Wrapped data in NounMetadata structure with 'noun' field
- EntityIdMapper: Fixed nested metadata.data structure access
- MetadataIndex: Fixed field type inference integration
- PeriodicCleanup: Updated for new metadata structure

### Core API Updates
- Brainy: Updated verb property access from v.type to v.verb
- ConfigAPI: Fixed NounMetadata access patterns
- DataAPI: Updated metadata handling

### Documentation Updates
- CREATING-AUGMENTATIONS.md: v4.0.0 breaking changes guide
- DEVELOPER-GUIDE.md: Migration checklist and examples
- COMPLETE-REFERENCE.md: v4.0.0 architecture improvements
- **finite-type-system.md: NEW - Revolutionary type system benefits**

### Build & Dependencies
- Zero TypeScript compilation errors
- Added @azure/storage-blob and @azure/identity
- 591 tests passing (23 timeout in long-running neural tests)

## What's NOT in This Release
This is a work-in-progress commit. Before v4.0.0 release we need:
- Storage adapter optimizations (batch operations, compression)
- Azure blob tier management (Hot/Cool/Archive)
- Cost optimization implementations
- Additional performance testing at billion-scale
- Migration guides for v3.x users

## Testing
- Clean build: 
- Type checking:  (zero errors)
- Test suite:  (591/614 passing, timeouts in neural tests only)

🔐 Generated with Claude Code
https://claude.com/claude-code

Co-Authored-By: Claude <noreply@anthropic.com>
2025-10-17 12:29:27 -07:00
581f9906fd feat: complete VFS with Knowledge Layer integration
- Add importFile() method for single file imports
- Implement entity helper methods (linkEntities, findEntityOccurrences)
- Fix critical embedding tokenizer bug (char.charCodeAt error)
- Fix removeRelationship to actually remove using brain.unrelate()
- Add setMetadata/getMetadata methods
- Fix GitBridge to query real relationships and events
- Enable background Knowledge Layer processing
- Rewrite README to emphasize knowledge over files
- Add comprehensive VFS documentation (core, knowledge layer, examples)
- Add complete test suite covering all VFS methods

This completes the VFS implementation with full Knowledge Layer support,
enabling files as living knowledge that understand themselves, evolve
over time, and connect to everything related.
2025-09-25 10:47:44 -07:00
7ab090fedf feat: add browser environment compatibility support
- Remove Node.js-specific imports from module level
- Use dynamic imports with isNode() environment checks
- Wrap all file system operations in conditional blocks
- Add fallback values for browser environments
- Ensure code works in both Node.js and browser contexts

This change enables Brainy to run in browser environments without
requiring Node.js polyfills, making it truly universal.

Co-Authored-By: dpsifr <noreply@dpsifr.com>
2025-09-17 14:53:54 -07:00
fcb7197fb0 feat: add node: protocol to all Node.js built-in imports for bundler compatibility
- Updated all fs, path, crypto, os, url, util, events, http, https, net, child_process, stream, and zlib imports
- Changed both static imports and dynamic imports to use node: protocol
- This makes Brainy more bundler-friendly by explicitly marking Node.js built-ins
- Prevents bundlers from attempting to polyfill or bundle these modules
- Reduces bundle size for web applications using Brainy
- Improves tree-shaking and dead code elimination

Benefits for external bundlers:
- Clear distinction between Node.js built-ins and external dependencies
- No ambiguity about what needs polyfilling
- Smaller bundles for browser builds
- Better compatibility with modern bundlers (Webpack 5, Vite, Rollup, esbuild)

🤖 Generated with Claude Code

Co-Authored-By: Claude <noreply@anthropic.com>
2025-09-17 14:20:21 -07:00
0996c72468 feat: Brainy 3.0 - Production-ready Triple Intelligence database
Major improvements and simplifications:
- Simplified to Q8-only model precision (99% accuracy, 75% smaller)
- Removed WAL augmentation (not needed with modern filesystems)
- Eliminated all fake/stub code - 100% production-ready
- Added comprehensive cloud deployment support (Docker, K8s, AWS, GCP)
- Enhanced distributed system capabilities
- Improved Triple Intelligence find() implementation
- Added streaming pipeline for large-scale operations
- Comprehensive test coverage with new test suites

Breaking changes:
- Renamed BrainyData to Brainy (simpler, cleaner)
- Removed FP32 model option (Q8 provides 99% accuracy)
- Removed deprecated augmentations

Performance improvements:
- 10x faster initialization with Q8-only
- Reduced memory footprint by 75%
- Better scaling for millions of items

Co-Authored-By: Recovery checkpoint system
2025-09-11 16:23:32 -07:00
184d5dcf34 feat: implement clean embedding architecture with Q8/FP32 precision control
- Unified embedding system with single EmbeddingManager
- Q8 model support with 75% smaller footprint (23MB vs 90MB)
- Intelligent precision auto-selection based on environment
- Clean cached embeddings with TTL and memory management
- Zero-config setup with smart defaults
- Complete storage structure documentation
- Removed legacy worker and hybrid managers
- Streamlined model configuration and precision management
2025-09-02 10:00:52 -07:00
2a080aca55 feat: replace dtype with clearer precision parameter for model selection
- Changed confusing 'dtype' to 'precision' for model variant selection
- Fixed Q8 quantized model loading in transformers.js pipeline
- Added proper model file detection for q8 vs fp32 models
- Updated all references across codebase to use new parameter
- Maintains backward compatibility while providing clearer API
2025-08-29 13:22:13 -07:00
32df3ee6ae feat: add optional Q8 quantized model support
- Add Q8 quantized models (75% smaller than FP32)
- Enhance download scripts with model variant selection
- Add smart model loading with availability detection
- Implement runtime warnings for Q8 compatibility
- Update documentation with Q8 usage examples
- Maintain 100% backward compatibility (FP32 default)

BREAKING CHANGE: None - FP32 remains default

🧠 Generated with [Claude Code](https://claude.ai/code)

Co-Authored-By: Claude <noreply@anthropic.com>
2025-08-29 11:09:40 -07:00
32e39ded53 fix: use fp32 models consistently everywhere to ensure compatibility
Changed default dtype from q8 to fp32 across all embedding implementations:
- embedding.ts: Default dtype changed to fp32
- worker-embedding.ts: Use fp32 for consistency
- universal-memory-manager.ts: Use fp32 for consistency
- lightweight-embedder.ts: Use fp32 for consistency
- hybridModelManager.ts: Use fp32 for all configurations

This ensures we use the exact same model (model.onnx) everywhere,
maintaining data compatibility and avoiding 404 errors for quantized models.
2025-08-29 10:23:23 -07:00
d4c78c8310 fix: resolve ONNX HandleScope V8 API errors by eliminating worker threads
CRITICAL ARCHITECTURAL FIX:
- Change node-worker strategy to node-direct for ONNX compatibility
- Use single model instance on main thread instead of worker pool
- Prevents HandleScope V8 API locking errors in Node.js 22/24
- Reduces memory usage from 360MB+ to ~90MB (single model vs 4 workers)
- Maintains async operations using native transformers.js capabilities

Root Cause: ONNX runtime cannot properly handle V8 isolate context
switching between worker threads, causing fatal HandleScope errors.

Solution: Keep ONNX operations in main V8 isolate while preserving
all existing async functionality and performance.

Tested: Multiple concurrent addNoun operations work without errors.
2025-08-28 16:24:02 -07:00
39f8b96464 feat: reliable multi-source model delivery system
- Implements automatic fallback chain: CDN → GitHub → Hugging Face
- Adds Soulcraft CDN as primary model source (models.soulcraft.com)
- GitHub release tar.gz extraction as reliable backup
- Zero configuration required - fully automatic
- Guarantees same model (all-MiniLM-L6-v2) across all sources
- 384-dimensional embeddings for data compatibility
- Local caching after first download
- Production-ready with multiple redundancy layers

BREAKING CHANGE: Removed tar-stream dependency, now uses native tar command
2025-08-28 08:45:35 -07:00
9c87982a7d 🧠 Brainy 2.0.0 - Zero-Configuration AI Database with Triple Intelligence™
MAJOR RELEASE: Complete evolution of Brainy with groundbreaking features and performance.

🎯 KEY FEATURES:
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
 Triple Intelligence™ Engine
  - Unified Vector + Metadata + Graph search
  - O(log n) performance on all operations
  - 3ms average search latency at any scale

 API Consolidation
  - 15+ search methods → 2 clean APIs
  - search() for vector similarity
  - find() for natural language queries

 Natural Language Processing
  - 220+ pre-computed NLP patterns
  - Instant context understanding
  - "Show me recent React components with tests"

 Zero Configuration
  - Works instantly, no setup required
  - Built-in embedding models (no API keys)
  - Smart defaults for everything
  - Automatic optimization

 Enterprise Features (Free for Everyone)
  - Scales to 10M+ items
  - Write-Ahead Logging (WAL) for durability
  - Distributed architecture with sharding
  - Read/write separation
  - Connection pooling & request deduplication
  - Built-in monitoring & health checks

 Universal Compatibility
  - Node.js, Browser, Edge Workers
  - 4 Storage Adapters (Memory, FileSystem, OPFS, S3)
  - TypeScript with full type safety
  - Worker-based embeddings

📦 WHAT'S INCLUDED:
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
• Core AI Database with HNSW indexing
• 19 Production-ready augmentations
• Universal Memory Manager
• Complete CLI with all commands
• Brain Cloud integration (soulcraft.com)
• Comprehensive documentation
• 52 test files with 400+ tests
• Migration guide from 1.x

📊 PERFORMANCE:
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
• Initialize: 450ms (24MB memory)
• Search: 3ms average (up to 10M items)
• Metadata Filter: 0.8ms (O(log n))
• Bulk Import: 2.3s per 1000 items
• Production Scale: 5.8ms at 10M items

🔧 TECHNICAL IMPROVEMENTS:
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
• TypeScript compilation: 153 errors → 0
• Memory usage: 200MB → 24MB baseline
• Circular dependencies resolved
• Worker thread communication fixed
• Storage adapter consistency
• Request coalescing for 3x performance

🛠️ CLI FEATURES:
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
• brainy add - Smart data ingestion
• brainy find - Natural language search
• brainy search - Vector similarity
• brainy chat - AI conversation mode
• brainy cloud - Brain Cloud integration
• brainy augment - Manage extensions
• 100% API compatibility

📚 DOCUMENTATION:
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
• Professional README with examples
• Quick Start guide (5 minutes)
• Enterprise Features guide
• Migration guide from 1.x
• API reference
• Architecture documentation

🌟 USE CASES:
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━
• AI memory layer for chatbots
• Semantic document search
• Code intelligence platforms
• Knowledge management systems
• Real-time recommendation engines
• Customer support automation

MIT License - Enterprise features included free for everyone.
No premium tiers, no paywalls, no limits.

Built with ❤️ by the Brainy community.
Visit https://soulcraft.com for Brain Cloud integration.
2025-08-26 12:32:21 -07:00