feat: add entity versioning system with critical bug fixes (v5.3.0)

Entity Versioning (NEW):
- Add complete entity versioning API (brain.versions.*) with 18 methods
- Content-addressable storage with SHA-256 deduplication
- Git-style version control: save, restore, compare, undo, prune
- Auto-versioning augmentation with pattern-based filtering
- Branch-isolated version histories
- Complete integration tests and API documentation

Critical Bug Fixes:
- Fix commit() not updating branch refs (brainy.ts:2385)
  - Root cause: Passed "heads/main" which normalized to "refs/heads/heads/main"
  - Impact: All Git-style versioning features were broken
  - Fix: Pass branch name directly for correct normalization
- Fix VFS entities missing isVFSEntity flag
  - Add isVFSEntity: true to all VFS files/folders for filtering
  - Resolves pollution of semantic search with filesystem entities
  - Updated in writeFile(), mkdir(), and root directory init

Implementation:
- src/versioning/VersionManager.ts - Core versioning engine
- src/versioning/VersionStorage.ts - Content-addressable storage
- src/versioning/VersionIndex.ts - Metadata indexing
- src/versioning/VersionDiff.ts - Version comparison
- src/versioning/VersioningAPI.ts - Public API interface
- src/augmentations/versioningAugmentation.ts - Auto-versioning
- tests/integration/versioning.test.ts - Full integration tests
- tests/unit/versioning/ - Unit test suite

Documentation:
- Complete Entity Versioning API section in docs/api/README.md
- VFS entity filtering guide with examples
- Updated "What's New" section for v5.3.0
- Strategy docs for both critical bugs

Test Results:
- 1168 tests passing
- Build: PASSING (no TypeScript errors)
- Integration tests: ALL PASSING

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>
This commit is contained in:
David Snelling 2025-11-04 11:19:02 -08:00
parent b31997b1ea
commit c488fa82cc
16 changed files with 5394 additions and 9 deletions

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/**
* VersionDiff - Deep Object Comparison for Entity Versions (v5.3.0)
*
* Provides deep diff between entity versions:
* - Field-level change detection
* - Nested object comparison
* - Array diffing
* - Type change detection
* - Human-readable diff output
*
* NO MOCKS - Production implementation
*/
import type { NounMetadata } from '../coreTypes.js'
/**
* Types of changes in a diff
*/
export type ChangeType = 'added' | 'removed' | 'modified' | 'type-changed'
/**
* A single field change in a diff
*/
export interface FieldChange {
/** Path to the field (e.g., 'metadata.user.name') */
path: string
/** Type of change */
type: ChangeType
/** Old value (undefined for 'added') */
oldValue?: any
/** New value (undefined for 'removed') */
newValue?: any
/** Old type (for 'type-changed') */
oldType?: string
/** New type (for 'type-changed') */
newType?: string
}
/**
* Complete diff between two versions
*/
export interface VersionDiff {
/** Entity ID being compared */
entityId: string
/** From version number */
fromVersion: number
/** To version number */
toVersion: number
/** Fields that were added */
added: FieldChange[]
/** Fields that were removed */
removed: FieldChange[]
/** Fields that were modified */
modified: FieldChange[]
/** Fields whose type changed */
typeChanged: FieldChange[]
/** Total number of changes */
totalChanges: number
/** Whether versions are identical */
identical: boolean
}
/**
* Options for diff comparison
*/
export interface DiffOptions {
/** Entity ID (for context in output) */
entityId: string
/** From version number */
fromVersion: number
/** To version number */
toVersion: number
/** Ignore these fields in comparison */
ignoreFields?: string[]
/** Maximum depth for nested object comparison (default: 10) */
maxDepth?: number
/** Include unchanged fields in output (default: false) */
includeUnchanged?: boolean
}
/**
* Compare two entity versions and generate diff
*
* @param from Old version entity
* @param to New version entity
* @param options Diff options
* @returns Diff between versions
*/
export function compareEntityVersions(
from: NounMetadata,
to: NounMetadata,
options: DiffOptions
): VersionDiff {
const added: FieldChange[] = []
const removed: FieldChange[] = []
const modified: FieldChange[] = []
const typeChanged: FieldChange[] = []
const ignoreFields = new Set(options.ignoreFields || [])
const maxDepth = options.maxDepth ?? 10
// Compare objects recursively
compareObjects(from, to, '', added, removed, modified, typeChanged, ignoreFields, 0, maxDepth)
const totalChanges = added.length + removed.length + modified.length + typeChanged.length
const identical = totalChanges === 0
return {
entityId: options.entityId,
fromVersion: options.fromVersion,
toVersion: options.toVersion,
added,
removed,
modified,
typeChanged,
totalChanges,
identical
}
}
/**
* Recursively compare two objects
*/
function compareObjects(
from: any,
to: any,
path: string,
added: FieldChange[],
removed: FieldChange[],
modified: FieldChange[],
typeChanged: FieldChange[],
ignoreFields: Set<string>,
depth: number,
maxDepth: number
): void {
if (depth >= maxDepth) {
// Hit max depth - treat as single value
if (!deepEqual(from, to)) {
modified.push({
path,
type: 'modified',
oldValue: from,
newValue: to
})
}
return
}
// Get all keys from both objects
const fromKeys = new Set(Object.keys(from || {}))
const toKeys = new Set(Object.keys(to || {}))
const allKeys = new Set([...fromKeys, ...toKeys])
for (const key of allKeys) {
const fieldPath = path ? `${path}.${key}` : key
// Skip ignored fields
if (ignoreFields.has(fieldPath) || ignoreFields.has(key)) {
continue
}
const fromHas = fromKeys.has(key)
const toHas = toKeys.has(key)
if (!fromHas && toHas) {
// Field added
added.push({
path: fieldPath,
type: 'added',
newValue: to[key]
})
} else if (fromHas && !toHas) {
// Field removed
removed.push({
path: fieldPath,
type: 'removed',
oldValue: from[key]
})
} else {
// Field exists in both - check for changes
const fromValue = from[key]
const toValue = to[key]
const fromType = getValueType(fromValue)
const toType = getValueType(toValue)
if (fromType !== toType) {
// Type changed
typeChanged.push({
path: fieldPath,
type: 'type-changed',
oldValue: fromValue,
newValue: toValue,
oldType: fromType,
newType: toType
})
} else if (fromType === 'object' && toType === 'object') {
// Recursively compare nested objects
compareObjects(
fromValue,
toValue,
fieldPath,
added,
removed,
modified,
typeChanged,
ignoreFields,
depth + 1,
maxDepth
)
} else if (fromType === 'array' && toType === 'array') {
// Compare arrays
if (!arraysEqual(fromValue, toValue)) {
modified.push({
path: fieldPath,
type: 'modified',
oldValue: fromValue,
newValue: toValue
})
}
} else {
// Primitive value comparison
if (!deepEqual(fromValue, toValue)) {
modified.push({
path: fieldPath,
type: 'modified',
oldValue: fromValue,
newValue: toValue
})
}
}
}
}
}
/**
* Get human-readable type of a value
*/
function getValueType(value: any): string {
if (value === null) return 'null'
if (value === undefined) return 'undefined'
if (Array.isArray(value)) return 'array'
return typeof value
}
/**
* Deep equality check
*/
function deepEqual(a: any, b: any): boolean {
if (a === b) return true
if (a === null || b === null) return false
if (a === undefined || b === undefined) return false
const typeA = getValueType(a)
const typeB = getValueType(b)
if (typeA !== typeB) return false
if (typeA === 'array') {
return arraysEqual(a, b)
}
if (typeA === 'object') {
return objectsEqual(a, b)
}
// Primitive comparison
return a === b
}
/**
* Compare arrays for equality
*/
function arraysEqual(a: any[], b: any[]): boolean {
if (a.length !== b.length) return false
for (let i = 0; i < a.length; i++) {
if (!deepEqual(a[i], b[i])) {
return false
}
}
return true
}
/**
* Compare objects for equality
*/
function objectsEqual(a: any, b: any): boolean {
const keysA = Object.keys(a)
const keysB = Object.keys(b)
if (keysA.length !== keysB.length) return false
for (const key of keysA) {
if (!keysB.includes(key)) return false
if (!deepEqual(a[key], b[key])) return false
}
return true
}
/**
* Format diff as human-readable string
*
* @param diff Diff to format
* @returns Formatted string
*/
export function formatDiff(diff: VersionDiff): string {
const lines: string[] = []
lines.push(`Diff: ${diff.entityId} v${diff.fromVersion} → v${diff.toVersion}`)
lines.push('')
if (diff.identical) {
lines.push('No changes')
return lines.join('\n')
}
lines.push(`Total changes: ${diff.totalChanges}`)
lines.push('')
if (diff.added.length > 0) {
lines.push(`Added (${diff.added.length}):`)
for (const change of diff.added) {
lines.push(` + ${change.path}: ${formatValue(change.newValue)}`)
}
lines.push('')
}
if (diff.removed.length > 0) {
lines.push(`Removed (${diff.removed.length}):`)
for (const change of diff.removed) {
lines.push(` - ${change.path}: ${formatValue(change.oldValue)}`)
}
lines.push('')
}
if (diff.modified.length > 0) {
lines.push(`Modified (${diff.modified.length}):`)
for (const change of diff.modified) {
lines.push(` ~ ${change.path}:`)
lines.push(` ${formatValue(change.oldValue)}`)
lines.push(`${formatValue(change.newValue)}`)
}
lines.push('')
}
if (diff.typeChanged.length > 0) {
lines.push(`Type Changed (${diff.typeChanged.length}):`)
for (const change of diff.typeChanged) {
lines.push(` ! ${change.path}: ${change.oldType}${change.newType}`)
lines.push(` ${formatValue(change.oldValue)}`)
lines.push(`${formatValue(change.newValue)}`)
}
}
return lines.join('\n')
}
/**
* Format value for display
*/
function formatValue(value: any): string {
if (value === null) return 'null'
if (value === undefined) return 'undefined'
if (typeof value === 'string') return `"${value}"`
if (typeof value === 'object') {
try {
return JSON.stringify(value)
} catch {
return '[Object]'
}
}
return String(value)
}
/**
* Get summary statistics about a diff
*/
export function getDiffStats(diff: VersionDiff): {
changedFields: number
addedFields: number
removedFields: number
modifiedFields: number
typeChangedFields: number
} {
return {
changedFields: diff.totalChanges,
addedFields: diff.added.length,
removedFields: diff.removed.length,
modifiedFields: diff.modified.length,
typeChangedFields: diff.typeChanged.length
}
}
/**
* Check if diff has any changes
*/
export function hasChanges(diff: VersionDiff): boolean {
return !diff.identical
}
/**
* Get all changed field paths
*/
export function getChangedPaths(diff: VersionDiff): string[] {
const paths = new Set<string>()
for (const change of diff.added) paths.add(change.path)
for (const change of diff.removed) paths.add(change.path)
for (const change of diff.modified) paths.add(change.path)
for (const change of diff.typeChanged) paths.add(change.path)
return Array.from(paths).sort()
}
/**
* Filter diff to only include specific paths
*/
export function filterDiff(diff: VersionDiff, paths: string[]): VersionDiff {
const pathSet = new Set(paths)
const filterChanges = (changes: FieldChange[]) =>
changes.filter((c) => pathSet.has(c.path) || paths.some((p) => c.path.startsWith(p + '.')))
const added = filterChanges(diff.added)
const removed = filterChanges(diff.removed)
const modified = filterChanges(diff.modified)
const typeChanged = filterChanges(diff.typeChanged)
return {
...diff,
added,
removed,
modified,
typeChanged,
totalChanges: added.length + removed.length + modified.length + typeChanged.length,
identical: added.length + removed.length + modified.length + typeChanged.length === 0
}
}

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/**
* VersionIndex - Fast Version Lookup Using Existing Index Infrastructure (v5.3.0)
*
* Integrates with Brainy's existing index system:
* - Uses MetadataIndexManager for field indexing
* - Leverages UnifiedCache for memory management
* - Uses EntityIdMapper for efficient ID handling
* - Uses ChunkManager for adaptive chunking
* - Leverages Roaring Bitmaps for fast set operations
*
* Version metadata is stored as regular entities with type='_version'
* This allows us to use existing index infrastructure without modification!
*
* Fields indexed:
* - versionEntityId: Entity being versioned
* - versionBranch: Branch version was created on
* - versionNumber: Version number
* - versionTag: Optional user tag
* - versionTimestamp: Creation timestamp
* - versionCommitHash: Commit hash
*
* NO MOCKS - Production implementation
*/
import { BaseStorage } from '../storage/baseStorage.js'
import type { EntityVersion } from './VersionManager.js'
import type { VersionQuery } from './VersionManager.js'
/**
* VersionIndex - Version lookup and querying using existing indexes
*
* Strategy: Store version metadata as special entities with type='_version'
* This leverages ALL existing index infrastructure automatically!
*/
export class VersionIndex {
private brain: any // Brainy instance
private initialized: boolean = false
constructor(brain: any) {
this.brain = brain
}
/**
* Initialize version index
*
* No special setup needed - we use existing entity storage and indexes!
*/
async initialize(): Promise<void> {
if (this.initialized) return
this.initialized = true
}
/**
* Add version to index
*
* Stores version metadata as a special entity with type='_version'
* This automatically indexes it using existing MetadataIndexManager!
*
* @param version Version metadata
*/
async addVersion(version: EntityVersion): Promise<void> {
await this.initialize()
// Generate unique ID for version entity
const versionEntityId = this.getVersionEntityId(
version.entityId,
version.version,
version.branch
)
// Store as special entity with type='state' (version is a snapshot/state)
// This automatically gets indexed by MetadataIndexManager!
await this.brain.saveNounMetadata(versionEntityId, {
id: versionEntityId,
type: 'state', // Use standard 'state' type (version = snapshot state)
name: `Version ${version.version} of ${version.entityId}`,
metadata: {
// Flag to identify as version metadata
_isVersion: true,
// These fields are automatically indexed by MetadataIndexManager
versionEntityId: version.entityId, // Entity being versioned
versionBranch: version.branch, // Branch
versionNumber: version.version, // Version number
versionTag: version.tag, // Optional tag
versionTimestamp: version.timestamp, // Timestamp (indexed with bucketing)
versionCommitHash: version.commitHash, // Commit hash
versionContentHash: version.contentHash, // Content hash
versionAuthor: version.author, // Author
versionDescription: version.description, // Description
versionMetadata: version.metadata // Additional metadata
}
})
}
/**
* Get versions for an entity
*
* Uses existing MetadataIndexManager to query efficiently!
*
* @param query Version query
* @returns List of versions (newest first)
*/
async getVersions(query: VersionQuery): Promise<EntityVersion[]> {
await this.initialize()
// Build metadata filter using existing query system
const filters: Record<string, any> = {
type: 'state',
_isVersion: true,
versionEntityId: query.entityId,
versionBranch: query.branch
}
// Add optional filters
if (query.tag) {
filters.versionTag = query.tag
}
// Query using existing search infrastructure
const results = await this.brain.searchByMetadata(filters)
// Convert entities back to EntityVersion format
const versions: EntityVersion[] = []
for (const entity of results) {
const version = this.entityToVersion(entity)
if (version) {
// Filter by date range if specified
if (query.startDate && version.timestamp < query.startDate) continue
if (query.endDate && version.timestamp > query.endDate) continue
versions.push(version)
}
}
// Sort by version number (newest first)
versions.sort((a, b) => b.version - a.version)
// Apply pagination
const start = query.offset || 0
const end = query.limit ? start + query.limit : undefined
return versions.slice(start, end)
}
/**
* Get specific version
*
* @param entityId Entity ID
* @param version Version number
* @param branch Branch name
* @returns Version metadata or null
*/
async getVersion(
entityId: string,
version: number,
branch: string
): Promise<EntityVersion | null> {
await this.initialize()
const versionEntityId = this.getVersionEntityId(entityId, version, branch)
const entity = await this.brain.getNounMetadata(versionEntityId)
if (!entity) return null
return this.entityToVersion(entity)
}
/**
* Get version by tag
*
* @param entityId Entity ID
* @param tag Version tag
* @param branch Branch name
* @returns Version metadata or null
*/
async getVersionByTag(
entityId: string,
tag: string,
branch: string
): Promise<EntityVersion | null> {
await this.initialize()
// Query using existing metadata index
const results = await this.brain.searchByMetadata({
type: 'state',
_isVersion: true,
versionEntityId: entityId,
versionBranch: branch,
versionTag: tag
})
if (results.length === 0) return null
// Return first match (tags should be unique per entity/branch)
return this.entityToVersion(results[0])
}
/**
* Get version count for entity
*
* @param entityId Entity ID
* @param branch Branch name
* @returns Number of versions
*/
async getVersionCount(entityId: string, branch: string): Promise<number> {
await this.initialize()
// Use existing search infrastructure
const results = await this.brain.searchByMetadata({
type: 'state',
_isVersion: true,
versionEntityId: entityId,
versionBranch: branch
})
return results.length
}
/**
* Remove version from index
*
* @param entityId Entity ID
* @param version Version number
* @param branch Branch name
*/
async removeVersion(
entityId: string,
version: number,
branch: string
): Promise<void> {
await this.initialize()
const versionEntityId = this.getVersionEntityId(entityId, version, branch)
// Delete version entity (automatically removed from indexes)
await this.brain.deleteNounMetadata(versionEntityId)
}
/**
* Convert entity to EntityVersion format
*
* @param entity Entity from storage
* @returns EntityVersion or null if invalid
*/
private entityToVersion(entity: any): EntityVersion | null {
if (!entity || !entity.metadata) return null
const m = entity.metadata
if (
!m.versionEntityId ||
!m.versionBranch ||
m.versionNumber === undefined ||
!m.versionCommitHash ||
!m.versionContentHash ||
!m.versionTimestamp
) {
return null
}
return {
version: m.versionNumber,
entityId: m.versionEntityId,
branch: m.versionBranch,
commitHash: m.versionCommitHash,
timestamp: m.versionTimestamp,
contentHash: m.versionContentHash,
tag: m.versionTag,
description: m.versionDescription,
author: m.versionAuthor,
metadata: m.versionMetadata
}
}
/**
* Generate unique ID for version entity
*
* Format: _version:{entityId}:{version}:{branch}
*
* @param entityId Entity ID
* @param version Version number
* @param branch Branch name
* @returns Version entity ID
*/
private getVersionEntityId(
entityId: string,
version: number,
branch: string
): string {
return `_version:${entityId}:${version}:${branch}`
}
/**
* Get all versioned entities (for cleanup/debugging)
*
* @returns List of entity IDs that have versions
*/
async getVersionedEntities(): Promise<string[]> {
await this.initialize()
// Query all version entities
const results = await this.brain.searchByMetadata({
type: 'state',
_isVersion: true
})
// Extract unique entity IDs
const entityIds = new Set<string>()
for (const entity of results) {
const version = this.entityToVersion(entity)
if (version) {
entityIds.add(version.entityId)
}
}
return Array.from(entityIds)
}
/**
* Clear all versions for an entity
*
* @param entityId Entity ID
* @param branch Branch name
* @returns Number of versions deleted
*/
async clearVersions(entityId: string, branch: string): Promise<number> {
await this.initialize()
const versions = await this.getVersions({ entityId, branch })
for (const version of versions) {
await this.removeVersion(entityId, version.version, branch)
}
return versions.length
}
}

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/**
* VersionManager - Entity-Level Versioning Engine (v5.3.0)
*
* Provides entity-level version control with:
* - save() - Create entity version
* - restore() - Restore entity to specific version
* - list() - List all versions of an entity
* - compare() - Deep diff between versions
* - prune() - Remove old versions (retention policies)
*
* Architecture:
* - Hybrid storage: COW commits for full snapshots + version index for fast queries
* - Content-addressable: SHA-256 hashing for deduplication
* - Space-efficient: Only stores changed data
* - Branch-aware: Versions tied to current branch
*
* NO MOCKS - Production implementation
*/
import { BaseStorage } from '../storage/baseStorage.js'
import { VersionStorage } from './VersionStorage.js'
import { VersionIndex } from './VersionIndex.js'
import { VersionDiff, compareEntityVersions } from './VersionDiff.js'
import type { NounMetadata } from '../coreTypes.js'
export interface EntityVersion {
/** Version number (1-indexed, sequential per entity) */
version: number
/** Entity ID */
entityId: string
/** Branch this version was created on */
branch: string
/** Commit hash containing this version */
commitHash: string
/** Timestamp of version creation */
timestamp: number
/** Optional user-provided tag (e.g., 'v1.0', 'before-refactor') */
tag?: string
/** Optional description */
description?: string
/** Content hash (SHA-256 of entity data) */
contentHash: string
/** Author of this version */
author?: string
/** Metadata about the version */
metadata?: Record<string, any>
}
export interface VersionQuery {
/** Entity ID to query versions for */
entityId: string
/** Optional: Filter by branch (default: current branch) */
branch?: string
/** Optional: Limit number of versions returned */
limit?: number
/** Optional: Skip first N versions */
offset?: number
/** Optional: Filter by tag */
tag?: string
/** Optional: Filter by date range */
startDate?: number
endDate?: number
}
export interface SaveVersionOptions {
/** Optional tag for this version (e.g., 'v1.0', 'milestone-1') */
tag?: string
/** Optional description */
description?: string
/** Optional author name */
author?: string
/** Optional custom metadata */
metadata?: Record<string, any>
/** Optional: Create commit automatically (default: false) */
createCommit?: boolean
/** Optional: Commit message if createCommit is true */
commitMessage?: string
}
export interface RestoreOptions {
/** Optional: Create version before restoring (for undo) */
createSnapshot?: boolean
/** Optional: Tag for snapshot before restore */
snapshotTag?: string
}
export interface PruneOptions {
/** Keep N most recent versions (required if keepVersions not set) */
keepRecent?: number
/** Keep versions newer than timestamp (optional) */
keepAfter?: number
/** Keep tagged versions (default: true) */
keepTagged?: boolean
/** Dry run - don't actually delete (default: false) */
dryRun?: boolean
}
/**
* VersionManager - Core versioning engine
*/
export class VersionManager {
private brain: any // Brainy instance
private versionStorage: VersionStorage
private versionIndex: VersionIndex
private initialized: boolean = false
constructor(brain: any) {
this.brain = brain
this.versionStorage = new VersionStorage(brain)
this.versionIndex = new VersionIndex(brain)
}
/**
* Initialize versioning system (lazy)
*/
async initialize(): Promise<void> {
if (this.initialized) return
await this.versionStorage.initialize()
await this.versionIndex.initialize()
this.initialized = true
}
/**
* Save a version of an entity
*
* Creates a version snapshot of the current entity state.
* If createCommit is true, also creates a commit containing this version.
*
* @param entityId Entity ID to version
* @param options Save options
* @returns Created version metadata
*/
async save(
entityId: string,
options: SaveVersionOptions = {}
): Promise<EntityVersion> {
await this.initialize()
// Get current entity state
const entity = await this.brain.getNounMetadata(entityId)
if (!entity) {
throw new Error(`Entity ${entityId} not found`)
}
// Get current branch
const currentBranch = this.brain.currentBranch
// Get next version number
const existingVersions = await this.versionIndex.getVersions({
entityId,
branch: currentBranch
})
const nextVersion = existingVersions.length + 1
// Calculate content hash
const contentHash = this.versionStorage.hashEntity(entity)
// Check for duplicate (same content as last version)
if (existingVersions.length > 0) {
const lastVersion = existingVersions[existingVersions.length - 1]
if (lastVersion.contentHash === contentHash) {
// Content unchanged - return last version instead of creating duplicate
return lastVersion
}
}
// Create commit if requested
let commitHash: string
if (options.createCommit) {
const commitMessage =
options.commitMessage || `Version ${nextVersion} of entity ${entityId}`
// Use brain's commit method (note: single options object)
await this.brain.commit({
message: commitMessage,
author: options.author,
metadata: {
versionedEntity: entityId,
version: nextVersion,
...options.metadata
}
})
// Get the commit hash that was just created
const refManager = this.brain.refManager
const ref = await refManager.getRef(currentBranch)
commitHash = ref
} else {
// Use current HEAD commit
const refManager = this.brain.refManager
const ref = await refManager.getRef(currentBranch)
if (!ref) {
throw new Error(
`No commit exists on branch ${currentBranch}. Create a commit first or use createCommit: true`
)
}
commitHash = ref
}
// Create version metadata
const version: EntityVersion = {
version: nextVersion,
entityId,
branch: currentBranch,
commitHash,
timestamp: Date.now(),
contentHash,
tag: options.tag,
description: options.description,
author: options.author,
metadata: options.metadata
}
// Store version
await this.versionStorage.saveVersion(version, entity)
await this.versionIndex.addVersion(version)
return version
}
/**
* Get all versions of an entity
*
* @param entityId Entity ID
* @param query Optional query filters
* @returns List of versions (newest first)
*/
async list(
entityId: string,
query: Partial<VersionQuery> = {}
): Promise<EntityVersion[]> {
await this.initialize()
const currentBranch = this.brain.currentBranch
return this.versionIndex.getVersions({
entityId,
branch: query.branch || currentBranch,
limit: query.limit,
offset: query.offset,
tag: query.tag,
startDate: query.startDate,
endDate: query.endDate
})
}
/**
* Get a specific version of an entity
*
* @param entityId Entity ID
* @param version Version number (1-indexed)
* @returns Version metadata
*/
async getVersion(
entityId: string,
version: number
): Promise<EntityVersion | null> {
await this.initialize()
const currentBranch = this.brain.currentBranch
return this.versionIndex.getVersion(entityId, version, currentBranch)
}
/**
* Get version by tag
*
* @param entityId Entity ID
* @param tag Version tag
* @returns Version metadata
*/
async getVersionByTag(
entityId: string,
tag: string
): Promise<EntityVersion | null> {
await this.initialize()
const currentBranch = this.brain.currentBranch
return this.versionIndex.getVersionByTag(entityId, tag, currentBranch)
}
/**
* Restore entity to a specific version
*
* Overwrites current entity state with the specified version.
* Optionally creates a snapshot before restoring for undo capability.
*
* @param entityId Entity ID
* @param version Version number or tag
* @param options Restore options
* @returns Restored version metadata
*/
async restore(
entityId: string,
version: number | string,
options: RestoreOptions = {}
): Promise<EntityVersion> {
await this.initialize()
// Create snapshot before restoring (for undo)
if (options.createSnapshot) {
await this.save(entityId, {
tag: options.snapshotTag || 'before-restore',
description: `Snapshot before restoring to version ${version}`,
metadata: { restoringTo: version }
})
}
// Get target version
let targetVersion: EntityVersion | null
if (typeof version === 'number') {
targetVersion = await this.getVersion(entityId, version)
} else {
targetVersion = await this.getVersionByTag(entityId, version)
}
if (!targetVersion) {
throw new Error(
`Version ${version} not found for entity ${entityId}`
)
}
// Load versioned entity data
const versionedEntity = await this.versionStorage.loadVersion(targetVersion)
if (!versionedEntity) {
throw new Error(
`Version data not found for entity ${entityId} version ${version}`
)
}
// Restore entity in storage
await this.brain.saveNounMetadata(entityId, versionedEntity)
return targetVersion
}
/**
* Compare two versions of an entity
*
* @param entityId Entity ID
* @param fromVersion Version number or tag (older)
* @param toVersion Version number or tag (newer)
* @returns Diff between versions
*/
async compare(
entityId: string,
fromVersion: number | string,
toVersion: number | string
): Promise<VersionDiff> {
await this.initialize()
// Get versions
const fromVer =
typeof fromVersion === 'number'
? await this.getVersion(entityId, fromVersion)
: await this.getVersionByTag(entityId, fromVersion)
const toVer =
typeof toVersion === 'number'
? await this.getVersion(entityId, toVersion)
: await this.getVersionByTag(entityId, toVersion)
if (!fromVer) {
throw new Error(
`Version ${fromVersion} not found for entity ${entityId}`
)
}
if (!toVer) {
throw new Error(
`Version ${toVersion} not found for entity ${entityId}`
)
}
// Load entity data
const fromEntity = await this.versionStorage.loadVersion(fromVer)
const toEntity = await this.versionStorage.loadVersion(toVer)
if (!fromEntity || !toEntity) {
throw new Error('Failed to load version data for comparison')
}
// Compare versions
return compareEntityVersions(fromEntity, toEntity, {
fromVersion: fromVer.version,
toVersion: toVer.version,
entityId
})
}
/**
* Prune old versions based on retention policy
*
* @param entityId Entity ID (or '*' for all entities)
* @param options Prune options
* @returns Number of versions deleted
*/
async prune(
entityId: string,
options: PruneOptions
): Promise<{ deleted: number; kept: number }> {
await this.initialize()
if (!options.keepRecent && !options.keepAfter) {
throw new Error(
'Must specify either keepRecent or keepAfter in prune options'
)
}
const currentBranch = this.brain.currentBranch
// Get all versions
const versions = await this.versionIndex.getVersions({
entityId,
branch: currentBranch
})
// Determine which versions to keep
const toKeep = new Set<number>()
const toDelete: EntityVersion[] = []
// Keep recent versions
if (options.keepRecent) {
const recentVersions = versions.slice(0, options.keepRecent)
recentVersions.forEach((v) => toKeep.add(v.version))
}
// Keep versions after timestamp
if (options.keepAfter) {
versions
.filter((v) => v.timestamp >= options.keepAfter!)
.forEach((v) => toKeep.add(v.version))
}
// Keep tagged versions
if (options.keepTagged !== false) {
versions
.filter((v) => v.tag !== undefined)
.forEach((v) => toKeep.add(v.version))
}
// Build delete list
for (const version of versions) {
if (!toKeep.has(version.version)) {
toDelete.push(version)
}
}
// Dry run - just return counts
if (options.dryRun) {
return {
deleted: toDelete.length,
kept: toKeep.size
}
}
// Delete versions
for (const version of toDelete) {
await this.versionStorage.deleteVersion(version)
await this.versionIndex.removeVersion(
entityId,
version.version,
currentBranch
)
}
return {
deleted: toDelete.length,
kept: toKeep.size
}
}
/**
* Get version count for an entity
*
* @param entityId Entity ID
* @returns Number of versions
*/
async getVersionCount(entityId: string): Promise<number> {
await this.initialize()
const currentBranch = this.brain.currentBranch
return this.versionIndex.getVersionCount(entityId, currentBranch)
}
/**
* Check if entity has versions
*
* @param entityId Entity ID
* @returns True if entity has versions
*/
async hasVersions(entityId: string): Promise<boolean> {
const count = await this.getVersionCount(entityId)
return count > 0
}
/**
* Get latest version of an entity
*
* @param entityId Entity ID
* @returns Latest version metadata or null
*/
async getLatest(entityId: string): Promise<EntityVersion | null> {
await this.initialize()
const versions = await this.list(entityId, { limit: 1 })
return versions[0] || null
}
/**
* Clear all versions for an entity
*
* @param entityId Entity ID
* @returns Number of versions deleted
*/
async clear(entityId: string): Promise<number> {
await this.initialize()
const result = await this.prune(entityId, {
keepRecent: 0,
keepTagged: false
})
return result.deleted
}
}

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/**
* VersionStorage - Hybrid Storage for Entity Versions (v5.3.0)
*
* Implements content-addressable storage for entity versions:
* - SHA-256 content hashing for deduplication
* - Stores versions in .brainy/versions/ directory
* - Integrates with COW commit system
* - Space-efficient: Only stores unique content
*
* Storage structure:
* .brainy/versions/
* entities/
* {entityId}/
* {contentHash}.json # Entity version data
* index/
* {entityId}.json # Version index (managed by VersionIndex)
*
* NO MOCKS - Production implementation
*/
import { createHash } from 'crypto'
import { BaseStorage } from '../storage/baseStorage.js'
import type { NounMetadata } from '../coreTypes.js'
import type { EntityVersion } from './VersionManager.js'
/**
* VersionStorage - Content-addressable version storage
*/
export class VersionStorage {
private brain: any // Brainy instance
private initialized: boolean = false
constructor(brain: any) {
this.brain = brain
}
/**
* Initialize version storage directories
*/
async initialize(): Promise<void> {
if (this.initialized) return
// Version storage uses the same storage adapter as the main database
// Directories are created automatically by the storage adapter
this.initialized = true
}
/**
* Calculate SHA-256 hash of entity content
*
* Used for content-addressable storage and deduplication
*
* @param entity Entity to hash
* @returns SHA-256 hash (hex string)
*/
hashEntity(entity: NounMetadata): string {
// Create stable JSON representation (sorted keys)
const stableJson = this.toStableJson(entity)
return createHash('sha256').update(stableJson).digest('hex')
}
/**
* Convert entity to stable JSON (sorted keys for consistent hashing)
*/
private toStableJson(obj: any): string {
if (obj === null) return 'null'
if (obj === undefined) return 'undefined'
if (typeof obj !== 'object') return JSON.stringify(obj)
if (Array.isArray(obj)) {
const items = obj.map((item) => this.toStableJson(item))
return `[${items.join(',') }]`
}
// Sort object keys for stable hashing
const sortedKeys = Object.keys(obj).sort()
const pairs = sortedKeys.map((key) => {
const value = this.toStableJson(obj[key])
return `"${key}":${value}`
})
return `{${pairs.join(',')}}`
}
/**
* Save entity version to content-addressable storage
*
* @param version Version metadata
* @param entity Entity data
*/
async saveVersion(
version: EntityVersion,
entity: NounMetadata
): Promise<void> {
await this.initialize()
// Content-addressable path: .brainy/versions/entities/{entityId}/{contentHash}.json
const versionPath = this.getVersionPath(
version.entityId,
version.contentHash
)
// Check if content already exists (deduplication)
const exists = await this.contentExists(versionPath)
if (exists) {
// Content already stored - no need to write again
return
}
// Store entity data
await this.writeVersionData(versionPath, entity)
}
/**
* Load entity version from storage
*
* @param version Version metadata
* @returns Entity data or null if not found
*/
async loadVersion(version: EntityVersion): Promise<NounMetadata | null> {
await this.initialize()
const versionPath = this.getVersionPath(
version.entityId,
version.contentHash
)
try {
return await this.readVersionData(versionPath)
} catch (error) {
console.error(`Failed to load version ${version.version}:`, error)
return null
}
}
/**
* Delete entity version from storage
*
* @param version Version to delete
*/
async deleteVersion(version: EntityVersion): Promise<void> {
await this.initialize()
const versionPath = this.getVersionPath(
version.entityId,
version.contentHash
)
await this.deleteVersionData(versionPath)
}
/**
* Get version storage path
*
* @param entityId Entity ID
* @param contentHash Content hash
* @returns Storage path
*/
private getVersionPath(entityId: string, contentHash: string): string {
return `versions/entities/${entityId}/${contentHash}.json`
}
/**
* Check if content exists in storage
*
* @param path Storage path
* @returns True if exists
*/
private async contentExists(path: string): Promise<boolean> {
try {
// Use storage adapter's exists check if available
const adapter = this.brain.storageAdapter
if (adapter && typeof adapter.exists === 'function') {
return await adapter.exists(path)
}
// Fallback: Try to read and catch error
await this.readVersionData(path)
return true
} catch {
return false
}
}
/**
* Write version data to storage
*
* @param path Storage path
* @param entity Entity data
*/
private async writeVersionData(
path: string,
entity: NounMetadata
): Promise<void> {
const adapter = this.brain.storageAdapter
if (!adapter) {
throw new Error('Storage adapter not available')
}
// Serialize entity data
const data = JSON.stringify(entity, null, 2)
// Write to storage using adapter
if (typeof adapter.writeFile === 'function') {
await adapter.writeFile(path, data)
} else if (typeof adapter.set === 'function') {
await adapter.set(path, data)
} else {
throw new Error('Storage adapter does not support write operations')
}
}
/**
* Read version data from storage
*
* @param path Storage path
* @returns Entity data
*/
private async readVersionData(path: string): Promise<NounMetadata> {
const adapter = this.brain.storageAdapter
if (!adapter) {
throw new Error('Storage adapter not available')
}
// Read from storage using adapter
let data: string
if (typeof adapter.readFile === 'function') {
data = await adapter.readFile(path)
} else if (typeof adapter.get === 'function') {
data = await adapter.get(path)
} else {
throw new Error('Storage adapter does not support read operations')
}
// Parse entity data
return JSON.parse(data)
}
/**
* Delete version data from storage
*
* @param path Storage path
*/
private async deleteVersionData(path: string): Promise<void> {
const adapter = this.brain.storageAdapter
if (!adapter) {
throw new Error('Storage adapter not available')
}
// Delete from storage using adapter
if (typeof adapter.deleteFile === 'function') {
await adapter.deleteFile(path)
} else if (typeof adapter.delete === 'function') {
await adapter.delete(path)
} else {
throw new Error('Storage adapter does not support delete operations')
}
}
}

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/**
* VersioningAPI - Public API for Entity Versioning (v5.3.0)
*
* User-friendly wrapper around VersionManager with:
* - Clean, simple API
* - Smart defaults
* - Error handling
* - Type safety
*
* Usage:
* const version = await brain.versions.save('entity-123', { tag: 'v1.0' })
* const versions = await brain.versions.list('entity-123')
* await brain.versions.restore('entity-123', 5)
* const diff = await brain.versions.compare('entity-123', 2, 5)
*
* NO MOCKS - Production implementation
*/
import { VersionManager } from './VersionManager.js'
import type {
EntityVersion,
SaveVersionOptions,
RestoreOptions,
PruneOptions,
VersionQuery
} from './VersionManager.js'
import type { VersionDiff, DiffOptions } from './VersionDiff.js'
import type { BaseStorage } from '../storage/baseStorage.js'
/**
* VersioningAPI - User-friendly versioning interface
*/
export class VersioningAPI {
private manager: VersionManager
private brain: any // Brainy instance
constructor(brain: any) {
this.brain = brain
this.manager = new VersionManager(brain as BaseStorage)
}
/**
* Save current state of entity as a new version
*
* Creates a version snapshot of the current entity state.
* Automatically handles deduplication - if content hasn't changed,
* returns the last version instead of creating a duplicate.
*
* @param entityId Entity ID to version
* @param options Save options
* @returns Created (or existing) version metadata
*
* @example
* ```typescript
* // Simple save
* const version = await brain.versions.save('user-123')
*
* // Save with tag and description
* const version = await brain.versions.save('user-123', {
* tag: 'v1.0',
* description: 'Initial release',
* author: 'alice'
* })
*
* // Save and create commit
* const version = await brain.versions.save('user-123', {
* tag: 'milestone-1',
* createCommit: true,
* commitMessage: 'Milestone 1 complete'
* })
* ```
*/
async save(
entityId: string,
options: SaveVersionOptions = {}
): Promise<EntityVersion> {
return this.manager.save(entityId, options)
}
/**
* List all versions of an entity
*
* Returns versions sorted by version number (newest first).
* Supports filtering by tag, date range, and pagination.
*
* @param entityId Entity ID
* @param options Query options
* @returns List of versions (newest first)
*
* @example
* ```typescript
* // Get all versions
* const versions = await brain.versions.list('user-123')
*
* // Get last 10 versions
* const recent = await brain.versions.list('user-123', { limit: 10 })
*
* // Get tagged versions
* const tagged = await brain.versions.list('user-123', { tag: 'v*' })
*
* // Get versions from last 30 days
* const recent = await brain.versions.list('user-123', {
* startDate: Date.now() - 30 * 24 * 60 * 60 * 1000
* })
* ```
*/
async list(
entityId: string,
options: Partial<VersionQuery> = {}
): Promise<EntityVersion[]> {
return this.manager.list(entityId, options)
}
/**
* Get specific version of an entity
*
* @param entityId Entity ID
* @param version Version number (1-indexed)
* @returns Version metadata or null if not found
*
* @example
* ```typescript
* const version = await brain.versions.getVersion('user-123', 5)
* if (version) {
* console.log(`Version ${version.version} created at ${new Date(version.timestamp)}`)
* }
* ```
*/
async getVersion(
entityId: string,
version: number
): Promise<EntityVersion | null> {
return this.manager.getVersion(entityId, version)
}
/**
* Get version by tag
*
* @param entityId Entity ID
* @param tag Version tag
* @returns Version metadata or null if not found
*
* @example
* ```typescript
* const version = await brain.versions.getVersionByTag('user-123', 'v1.0')
* ```
*/
async getVersionByTag(
entityId: string,
tag: string
): Promise<EntityVersion | null> {
return this.manager.getVersionByTag(entityId, tag)
}
/**
* Get latest version of an entity
*
* @param entityId Entity ID
* @returns Latest version or null if no versions exist
*
* @example
* ```typescript
* const latest = await brain.versions.getLatest('user-123')
* ```
*/
async getLatest(entityId: string): Promise<EntityVersion | null> {
return this.manager.getLatest(entityId)
}
/**
* Get version content without restoring
*
* Allows you to preview version data without modifying the current entity.
*
* @param entityId Entity ID
* @param version Version number or tag
* @returns Version content
*
* @example
* ```typescript
* // Preview version 5 without restoring
* const oldData = await brain.versions.getContent('user-123', 5)
* console.log('Version 5 had name:', oldData.name)
*
* // Compare with current
* const current = await brain.getNounMetadata('user-123')
* console.log('Current name:', current.name)
* ```
*/
async getContent(
entityId: string,
version: number | string
): Promise<any> {
// Get version metadata
let versionMeta: EntityVersion | null
if (typeof version === 'number') {
versionMeta = await this.manager.getVersion(entityId, version)
} else {
versionMeta = await this.manager.getVersionByTag(entityId, version)
}
if (!versionMeta) {
throw new Error(
`Version ${version} not found for entity ${entityId}`
)
}
// Load version content
const versionStorage = (this.manager as any).versionStorage
const content = await versionStorage.loadVersion(versionMeta)
if (!content) {
throw new Error(
`Version content not found for entity ${entityId} version ${version}`
)
}
return content
}
/**
* Restore entity to a specific version
*
* Overwrites current entity state with the specified version.
* Optionally creates a snapshot before restoring for undo capability.
*
* @param entityId Entity ID
* @param version Version number or tag to restore to
* @param options Restore options
* @returns Restored version metadata
*
* @example
* ```typescript
* // Simple restore
* await brain.versions.restore('user-123', 5)
*
* // Restore with safety snapshot
* await brain.versions.restore('user-123', 5, {
* createSnapshot: true,
* snapshotTag: 'before-restore'
* })
*
* // Restore by tag
* await brain.versions.restore('user-123', 'v1.0')
* ```
*/
async restore(
entityId: string,
version: number | string,
options: RestoreOptions = {}
): Promise<EntityVersion> {
return this.manager.restore(entityId, version, options)
}
/**
* Compare two versions of an entity
*
* Generates a deep diff showing added, removed, modified, and type-changed fields.
*
* @param entityId Entity ID
* @param fromVersion Version number or tag (older)
* @param toVersion Version number or tag (newer)
* @returns Diff between versions
*
* @example
* ```typescript
* // Compare version 2 to version 5
* const diff = await brain.versions.compare('user-123', 2, 5)
*
* console.log(`Added fields: ${diff.added.length}`)
* console.log(`Removed fields: ${diff.removed.length}`)
* console.log(`Modified fields: ${diff.modified.length}`)
*
* // Print human-readable diff
* import { formatDiff } from './VersionDiff.js'
* console.log(formatDiff(diff))
* ```
*/
async compare(
entityId: string,
fromVersion: number | string,
toVersion: number | string
): Promise<VersionDiff> {
return this.manager.compare(entityId, fromVersion, toVersion)
}
/**
* Prune old versions based on retention policy
*
* Removes old versions while preserving recent and tagged versions.
* Use dryRun to preview what would be deleted without actually deleting.
*
* @param entityId Entity ID (or '*' for all entities - NOT IMPLEMENTED YET)
* @param options Prune options
* @returns Count of deleted and kept versions
*
* @example
* ```typescript
* // Keep last 10 versions, delete rest
* const result = await brain.versions.prune('user-123', {
* keepRecent: 10
* })
* console.log(`Deleted ${result.deleted} versions`)
*
* // Keep last 30 days, preserve tagged versions
* const result = await brain.versions.prune('user-123', {
* keepAfter: Date.now() - 30 * 24 * 60 * 60 * 1000,
* keepTagged: true
* })
*
* // Dry run - see what would be deleted
* const result = await brain.versions.prune('user-123', {
* keepRecent: 5,
* dryRun: true
* })
* console.log(`Would delete ${result.deleted} versions`)
* ```
*/
async prune(
entityId: string,
options: PruneOptions
): Promise<{ deleted: number; kept: number }> {
return this.manager.prune(entityId, options)
}
/**
* Get version count for an entity
*
* @param entityId Entity ID
* @returns Number of versions
*
* @example
* ```typescript
* const count = await brain.versions.count('user-123')
* console.log(`Entity has ${count} versions`)
* ```
*/
async count(entityId: string): Promise<number> {
return this.manager.getVersionCount(entityId)
}
/**
* Check if entity has any versions
*
* @param entityId Entity ID
* @returns True if entity has versions
*
* @example
* ```typescript
* if (await brain.versions.hasVersions('user-123')) {
* console.log('Entity is versioned')
* }
* ```
*/
async hasVersions(entityId: string): Promise<boolean> {
return this.manager.hasVersions(entityId)
}
/**
* Clear all versions for an entity
*
* WARNING: This permanently deletes all version history!
*
* @param entityId Entity ID
* @returns Number of versions deleted
*
* @example
* ```typescript
* const deleted = await brain.versions.clear('user-123')
* console.log(`Deleted ${deleted} versions`)
* ```
*/
async clear(entityId: string): Promise<number> {
return this.manager.clear(entityId)
}
// ===== CONVENIENCE METHODS =====
/**
* Quick save with auto-generated tag
*
* Generates tag in format: 'auto-{timestamp}'
*
* @param entityId Entity ID
* @param description Optional description
* @returns Created version
*/
async quickSave(
entityId: string,
description?: string
): Promise<EntityVersion> {
return this.save(entityId, {
tag: `auto-${Date.now()}`,
description
})
}
/**
* Undo last change (restore to previous version)
*
* Safely restores to previous version with automatic snapshot.
*
* @param entityId Entity ID
* @returns Restored version metadata
*/
async undo(entityId: string): Promise<EntityVersion | null> {
const versions = await this.list(entityId, { limit: 2 })
if (versions.length < 2) {
// No previous version to restore to
return null
}
const previousVersion = versions[1] // Second most recent
return this.restore(entityId, previousVersion.version, {
createSnapshot: true,
snapshotTag: 'before-undo'
})
}
/**
* Get version history summary
*
* @param entityId Entity ID
* @returns Summary statistics
*/
async history(entityId: string): Promise<{
total: number
oldest?: EntityVersion
newest?: EntityVersion
tagged: number
branches: string[]
}> {
const versions = await this.list(entityId)
const tagged = versions.filter((v) => v.tag !== undefined).length
const branches = [...new Set(versions.map((v) => v.branch))]
return {
total: versions.length,
oldest: versions[versions.length - 1],
newest: versions[0],
tagged,
branches
}
}
/**
* Revert to previous version (alias for undo with better semantics)
*
* Restores entity to the previous version with automatic safety snapshot.
*
* @param entityId Entity ID
* @returns Restored version or null if not possible
*
* @example
* ```typescript
* // Made a mistake? Revert!
* await brain.update('user-123', { name: 'Wrong Name' })
* await brain.versions.revert('user-123') // Back to previous state
* ```
*/
async revert(entityId: string): Promise<EntityVersion | null> {
return this.undo(entityId)
}
/**
* Tag an existing version
*
* Updates the tag of an existing version.
* Note: This creates a new version with the tag, not modifying the existing one.
*
* @param entityId Entity ID
* @param version Version number
* @param tag New tag
* @returns Updated version
*/
async tag(
entityId: string,
version: number,
tag: string
): Promise<EntityVersion> {
// Get the version
const existingVersion = await this.getVersion(entityId, version)
if (!existingVersion) {
throw new Error(`Version ${version} not found for entity ${entityId}`)
}
// Create new version with tag
// Note: This is a limitation - we can't modify existing versions
// because they're immutable. Instead, we create a new version.
return this.save(entityId, {
tag,
description: `Tagged version ${version} as ${tag}`,
metadata: { originalVersion: version }
})
}
/**
* Get diff between entity's current state and a version
*
* @param entityId Entity ID
* @param version Version to compare against
* @returns Diff showing changes
*/
async diffWithCurrent(
entityId: string,
version: number | string
): Promise<VersionDiff> {
// Save current state (will be deduplicated if unchanged)
const currentVersion = await this.save(entityId, {
tag: 'temp-compare',
description: 'Temporary version for comparison'
})
// Compare
return this.compare(entityId, version, currentVersion.version)
}
}