refactor(8.0): remove dead, unreachable, and unwired modules

Pre-GA dead-code sweep. A deterministic import-reachability walk from the
package's real entry points (the exports map, the CLI bin, the conversation
surface) found 34 source modules that nothing reachable imports — they
compile and ship as dist output that no consumer or internal path can ever
reach. All were superseded duplicates, abandoned parallel implementations,
or built-but-never-wired features:

  - superseded duplicates of live modules: an older "unified" entry, a
    standalone neural-import variant, a static NLP processor + its matcher,
    a parallel API-types module, a duplicate progress-types module
  - an abandoned import path (orchestrator + entity deduplicator + barrels)
    left behind when ingestion moved to the coordinator
  - unwired feature modules (instance pool, import presets, cached
    embeddings, relationship-confidence scorer) reachable only from tests
  - dead leaf utilities (write buffer, deleted-items index, bounded
    registry, two crypto shims, a cache manager, a structured logger, a
    stale v5 type-migration helper, a browser-only FS type shim) and
    several dead re-export barrels
  - a CLI catalog command wired into no command

Also removed two tests that only exercised deleted modules, repointed two
VFS tests off a deleted barrel onto the implementation module, and deleted
one example that demoed removed features.

Verified: clean build (both tsc passes), unit 1505 + integration 607 green,
and a re-run of the reachability walk reports zero remaining orphans.

Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
This commit is contained in:
David Snelling 2026-06-24 15:18:40 -07:00
parent 03d654061f
commit bf0afe8563
39 changed files with 2 additions and 10497 deletions

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/**
* Directory Import with Entity Extraction Caching Example
*
* Demonstrates:
* - Importing directories with progress tracking
* - Entity extraction caching for performance
* - Relationship detection with confidence scores
* - Cache statistics monitoring
*/
import { Brainy, NounType, VerbType } from '../src/brainy.js'
import { DirectoryImporter } from '../src/vfs/importers/DirectoryImporter.js'
import { ProgressTracker, formatProgress } from '../src/types/progress.types.js'
import { detectRelationshipsWithConfidence } from '../src/neural/relationshipConfidence.js'
import { NeuralEntityExtractor } from '../src/neural/entityExtractor.js'
async function main() {
console.log('🧠 Brainy 3.21.0 - Directory Import with Caching Example\n')
// Initialize Brainy
const brain = new Brainy({ verbose: false })
await brain.init()
console.log('✅ Brainy initialized\n')
// The entity extractor (and its extraction cache) is constructed directly.
const extractor = new NeuralEntityExtractor(brain)
// Example 1: Import directory with entity extraction caching
console.log('📁 Example 1: Import Directory with Caching\n')
const vfs = brain.vfs
const importer = new DirectoryImporter(vfs, brain)
// Progress tracking
const tracker = ProgressTracker.create(100)
tracker.start()
try {
// Import with progress (using async generator)
console.log('Importing directory...')
let filesProcessed = 0
for await (const progress of importer.importStream('./examples', {
batchSize: 10,
recursive: true,
generateEmbeddings: true,
extractMetadata: true
})) {
if (progress.type === 'progress') {
filesProcessed = progress.processed
const trackedProgress = tracker.update(progress.processed, progress.current)
console.log(` ${formatProgress(trackedProgress)}`)
} else if (progress.type === 'complete') {
console.log(`\n✅ Import complete! Processed ${progress.processed} files\n`)
} else if (progress.type === 'error') {
console.error(`❌ Error: ${progress.error?.message}`)
}
}
tracker.complete({ filesProcessed })
} catch (error) {
console.error('Import failed:', error)
}
// Example 2: Entity extraction with caching
console.log('\n📝 Example 2: Entity Extraction with Caching\n')
const sampleText = `
John Smith created the user authentication system for the application.
The authentication system uses JWT tokens and bcrypt for password hashing.
Mary Johnson manages the backend team that maintains the system.
The system was built using Node.js and PostgreSQL database.
`
console.log('First extraction (cache miss):')
const startTime1 = Date.now()
const entities1 = await extractor.extract(sampleText, {
types: [NounType.Person, NounType.Service, NounType.Technology],
confidence: 0.7,
cache: {
enabled: true,
ttl: 7 * 24 * 60 * 60 * 1000, // 7 days
invalidateOn: 'hash'
}
})
const time1 = Date.now() - startTime1
console.log(` Extracted ${entities1.length} entities in ${time1}ms`)
console.log(` Entities: ${entities1.map(e => e.text).join(', ')}\n`)
console.log('Second extraction (cache hit):')
const startTime2 = Date.now()
const entities2 = await extractor.extract(sampleText, {
types: [NounType.Person, NounType.Service, NounType.Technology],
confidence: 0.7,
cache: {
enabled: true,
invalidateOn: 'hash'
}
})
const time2 = Date.now() - startTime2
console.log(` Extracted ${entities2.length} entities in ${time2}ms`)
console.log(` Speedup: ${Math.round(time1 / time2)}x faster!\n`)
// Show cache statistics
const cacheStats = extractor.getCacheStats()
console.log('📊 Cache Statistics:')
console.log(` Hits: ${cacheStats.hits}`)
console.log(` Misses: ${cacheStats.misses}`)
console.log(` Hit Rate: ${(cacheStats.hitRate * 100).toFixed(1)}%`)
console.log(` Total Entries: ${cacheStats.totalEntries}`)
console.log(` Avg Entities per Entry: ${cacheStats.averageEntitiesPerEntry}\n`)
// Example 3: Relationship detection with confidence
console.log('🔗 Example 3: Relationship Detection with Confidence\n')
const relationships = detectRelationshipsWithConfidence(
entities1,
sampleText,
{
minConfidence: 0.6,
maxDistance: 100,
useProximityBoost: true,
usePatternMatching: true,
useStructuralAnalysis: true
}
)
console.log(`Detected ${relationships.length} relationships:\n`)
for (const rel of relationships.slice(0, 5)) { // Show top 5
console.log(` ${rel.sourceEntity.text} --[${rel.verbType}]--> ${rel.targetEntity.text}`)
console.log(` Confidence: ${(rel.confidence * 100).toFixed(1)}%`)
console.log(` Evidence: ${rel.evidence.reasoning}`)
console.log(` Method: ${rel.evidence.method}`)
console.log(` Source: "${rel.evidence.sourceText?.substring(0, 60)}..."\n`)
}
// Example 4: Create relationships in graph with confidence
console.log('📊 Example 4: Creating Relationships in Graph\n')
const createdRelations = []
for (const rel of relationships.slice(0, 3)) { // Create top 3
try {
// Add entities to brain
const sourceId = await brain.add({
data: rel.sourceEntity.text,
type: rel.sourceEntity.type,
metadata: {
confidence: rel.sourceEntity.confidence,
extractedFrom: 'sample text'
}
})
const targetId = await brain.add({
data: rel.targetEntity.text,
type: rel.targetEntity.type,
metadata: {
confidence: rel.targetEntity.confidence,
extractedFrom: 'sample text'
}
})
// Create relationship with confidence
const relationId = await brain.relate({
from: sourceId,
to: targetId,
type: rel.verbType,
confidence: rel.confidence,
evidence: rel.evidence,
metadata: {
autoDetected: true,
detectedAt: new Date().toISOString()
}
})
createdRelations.push(relationId)
console.log(` ✅ Created: ${rel.sourceEntity.text}${rel.targetEntity.text}`)
} catch (error) {
console.error(` ❌ Failed to create relationship:`, error)
}
}
console.log(`\n✅ Created ${createdRelations.length} relationships in knowledge graph`)
// Example 5: Query relationships by confidence
console.log('\n🔍 Example 5: Query High-Confidence Relationships\n')
const allRelations = await brain.getRelations({
limit: 100
})
const highConfidence = allRelations.filter(r => (r.confidence || 0) >= 0.7)
console.log(`Found ${highConfidence.length} high-confidence relationships (≥70%):\n`)
for (const rel of highConfidence.slice(0, 5)) {
console.log(` ${rel.from}${rel.to} (${rel.type})`)
console.log(` Confidence: ${((rel.confidence || 0) * 100).toFixed(1)}%`)
if (rel.evidence) {
console.log(` Method: ${rel.evidence.method}`)
console.log(` Reasoning: ${rel.evidence.reasoning}\n`)
}
}
// Example 6: Cache management
console.log('🧹 Example 6: Cache Management\n')
console.log('Cache operations:')
// Cleanup expired entries
const cleaned = extractor.cleanupCache()
console.log(` Cleaned ${cleaned} expired entries`)
// Invalidate specific cache entry
const invalidated = extractor.invalidateCache('hash:abc123')
console.log(` Invalidated entry: ${invalidated}`)
// Get final stats
const finalStats = extractor.getCacheStats()
console.log(` Final cache size: ${finalStats.totalEntries} entries`)
console.log(` Memory used: ~${Math.round(finalStats.cacheSize / 1024)}KB`)
// Clear all cache (optional)
// extractor.clearCache()
// console.log(' Cleared entire cache')
console.log('\n✨ Example complete!')
console.log('\n📚 Key Takeaways:')
console.log(' • Entity extraction caching provides 10-100x speedup on repeated content')
console.log(' • Progress tracking gives real-time feedback for long operations')
console.log(' • Relationship confidence helps filter low-quality connections')
console.log(' • Evidence tracking makes relationships explainable and debuggable')
console.log(' • All features are opt-in and backward compatible')
}
// Run example
main().catch(console.error)

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/**
* Augmentation Catalog for CLI
*
* Displays available augmentations catalog
* Local catalog with caching support
*/
import chalk from 'chalk'
import { readFileSync, writeFileSync, existsSync, mkdirSync } from 'node:fs'
import { join } from 'node:path'
import { homedir } from 'node:os'
const CATALOG_API = process.env.BRAINY_CATALOG_URL || null
const CACHE_PATH = join(homedir(), '.brainy', 'catalog-cache.json')
const CACHE_TTL = 24 * 60 * 60 * 1000 // 24 hours
interface Augmentation {
id: string
name: string
description: string
category: string
status: 'available' | 'coming_soon' | 'deprecated'
popular?: boolean
eta?: string
}
interface Category {
id: string
name: string
icon: string
description: string
}
interface Catalog {
version: string
categories: Category[]
augmentations: Augmentation[]
}
/**
* Fetch catalog from API with caching
*/
export async function fetchCatalog(): Promise<Catalog | null> {
try {
// Check cache first
const cached = loadCache()
if (cached) return cached
// If external catalog API is configured, try to fetch
if (CATALOG_API) {
const response = await fetch(`${CATALOG_API}/api/catalog/cli`)
if (!response.ok) throw new Error('API unavailable')
const catalog = await response.json()
// Save to cache
saveCache(catalog)
return catalog
}
// Fall back to local catalog
return getDefaultCatalog()
} catch (error) {
// Try loading from cache even if expired
const cached = loadCache(true)
if (cached) {
console.log(chalk.yellow('📡 Using cached catalog'))
return cached
}
// Fall back to hardcoded catalog
return getDefaultCatalog()
}
}
/**
* Display catalog in CLI
*/
export async function showCatalog(options: {
category?: string
search?: string
detailed?: boolean
}) {
const catalog = await fetchCatalog()
if (!catalog) {
console.log(chalk.red('❌ Could not load augmentation catalog'))
return
}
console.log(chalk.cyan.bold('🧠 Brainy Augmentation Catalog'))
console.log(chalk.gray(`Version ${catalog.version}`))
console.log('')
// Filter augmentations
let augmentations = catalog.augmentations
if (options.category) {
augmentations = augmentations.filter(a => a.category === options.category)
}
if (options.search) {
const query = options.search.toLowerCase()
augmentations = augmentations.filter(a =>
a.name.toLowerCase().includes(query) ||
a.description.toLowerCase().includes(query)
)
}
// Group by category
const grouped = groupByCategory(augmentations, catalog.categories)
// Display
for (const [category, augs] of Object.entries(grouped)) {
if (augs.length === 0) continue
const cat = catalog.categories.find(c => c.id === category)
console.log(chalk.bold(`${cat?.icon || '📦'} ${cat?.name || category}`))
for (const aug of augs) {
const status = getStatusIcon(aug.status)
const popular = aug.popular ? chalk.yellow(' ⭐') : ''
const eta = aug.eta ? chalk.gray(` (${aug.eta})`) : ''
console.log(` ${status} ${aug.name}${popular}${eta}`)
if (options.detailed) {
console.log(chalk.gray(` ${aug.description}`))
}
}
console.log('')
}
// Show summary
const available = augmentations.filter(a => a.status === 'available').length
const coming = augmentations.filter(a => a.status === 'coming_soon').length
console.log(chalk.gray('─'.repeat(50)))
console.log(chalk.green(`${available} available`) + chalk.gray(``) +
chalk.yellow(`🔜 ${coming} coming soon`))
console.log('')
console.log(chalk.dim('Configure augmentations with "brainy augment"'))
console.log(chalk.dim('Run "brainy augment info <name>" for details'))
}
/**
* Show detailed info about an augmentation
*/
export async function showAugmentationInfo(id: string) {
const catalog = await fetchCatalog()
if (!catalog) {
console.log(chalk.red('❌ Could not load augmentation catalog'))
return
}
const aug = catalog.augmentations.find(a => a.id === id)
if (!aug) {
console.log(chalk.red(`❌ Augmentation not found: ${id}`))
console.log('')
console.log('Available augmentations:')
catalog.augmentations.forEach(a => {
console.log(`${a.id}`)
})
return
}
// Fetch full details from API if available
try {
if (!CATALOG_API) throw new Error('No external catalog configured')
const response = await fetch(`${CATALOG_API}/api/catalog/augmentation/${id}`)
const details = await response.json()
console.log(chalk.cyan.bold(`📦 ${details.name}`))
if (details.popular) console.log(chalk.yellow('⭐ Popular'))
console.log('')
console.log(chalk.bold('Category:'), getCategoryName(details.category, catalog.categories))
console.log(chalk.bold('Status:'), getStatusText(details.status))
if (details.eta) console.log(chalk.bold('Expected:'), details.eta)
console.log('')
console.log(chalk.bold('Description:'))
console.log(details.longDescription || details.description)
console.log('')
if (details.features) {
console.log(chalk.bold('Features:'))
details.features.forEach((f: string) => console.log(`${f}`))
console.log('')
}
if (details.example) {
console.log(chalk.bold('Example:'))
console.log(chalk.gray('─'.repeat(50)))
console.log(details.example.code)
console.log(chalk.gray('─'.repeat(50)))
console.log('')
}
if (details.requirements?.config) {
console.log(chalk.bold('Required Configuration:'))
details.requirements.config.forEach((c: string) => console.log(`${c}`))
console.log('')
}
if (details.pricing) {
console.log(chalk.bold('Available in:'))
details.pricing.tiers.forEach((t: string) => console.log(`${t}`))
console.log('')
}
console.log(chalk.dim('To activate: brainy augment activate'))
} catch (error) {
// Show basic info if API fails
console.log(chalk.cyan.bold(`📦 ${aug.name}`))
console.log(aug.description)
console.log('')
console.log(chalk.dim('Full details unavailable (no external catalog configured)'))
}
}
/**
* Show user's available augmentations
*/
export async function showAvailable(licenseKey?: string) {
// Show local catalog as default
const catalog = await fetchCatalog()
if (!catalog) {
console.log(chalk.red('❌ Could not load augmentation catalog'))
return
}
console.log(chalk.cyan.bold('🧠 Available Augmentations'))
console.log('')
const available = catalog.augmentations.filter(a => a.status === 'available')
const grouped = groupByCategory(available, catalog.categories)
for (const [category, augs] of Object.entries(grouped)) {
if (augs.length === 0) continue
const cat = catalog.categories.find(c => c.id === category)
console.log(chalk.bold(`${cat?.icon || '📦'} ${cat?.name || category}`))
augs.forEach(aug => {
console.log(`${aug.name}`)
console.log(chalk.gray(` ${aug.description}`))
})
console.log('')
}
console.log(chalk.green(`${available.length} augmentations available`))
// If external API is configured and license key provided, try to fetch personalized data
if (CATALOG_API && licenseKey) {
try {
const response = await fetch(`${CATALOG_API}/api/catalog/available`, {
headers: { 'x-license-key': licenseKey }
})
if (response.ok) {
const data = await response.json()
console.log(chalk.gray(`Plan: ${data.plan || 'Standard'}`))
if (data.operations) {
const used = data.operations.used || 0
const limit = data.operations.limit
const percent = limit === 'unlimited' ? 0 : Math.round((used / limit) * 100)
console.log(chalk.bold('Usage:'))
if (limit === 'unlimited') {
console.log(` Unlimited operations`)
} else {
console.log(` ${used.toLocaleString()} / ${limit.toLocaleString()} operations (${percent}%)`)
}
}
}
} catch (error) {
// Ignore external API errors - local catalog is sufficient
}
}
}
// Helper functions
function loadCache(ignoreExpiry = false): Catalog | null {
try {
if (!existsSync(CACHE_PATH)) return null
const data = JSON.parse(readFileSync(CACHE_PATH, 'utf8'))
if (!ignoreExpiry && Date.now() - data.timestamp > CACHE_TTL) {
return null
}
return data.catalog
} catch {
return null
}
}
function saveCache(catalog: Catalog): void {
try {
const dir = join(homedir(), '.brainy')
if (!existsSync(dir)) {
mkdirSync(dir, { recursive: true })
}
writeFileSync(CACHE_PATH, JSON.stringify({
catalog,
timestamp: Date.now()
}))
} catch {
// Ignore cache save errors
}
}
function groupByCategory(augmentations: Augmentation[], categories: Category[]) {
const grouped: Record<string, Augmentation[]> = {}
for (const aug of augmentations) {
if (!grouped[aug.category]) {
grouped[aug.category] = []
}
grouped[aug.category].push(aug)
}
// Sort by category order
const ordered: Record<string, Augmentation[]> = {}
const categoryOrder = ['memory', 'coordination', 'enterprise', 'perception', 'dialog', 'activation', 'cognition', 'websocket']
for (const cat of categoryOrder) {
if (grouped[cat]) {
ordered[cat] = grouped[cat]
}
}
return ordered
}
function getStatusIcon(status: string): string {
switch (status) {
case 'available': return chalk.green('✅')
case 'coming_soon': return chalk.yellow('🔜')
case 'deprecated': return chalk.red('⚠️')
default: return '❓'
}
}
function getStatusText(status: string): string {
switch (status) {
case 'available': return chalk.green('Available')
case 'coming_soon': return chalk.yellow('Coming Soon')
case 'deprecated': return chalk.red('Deprecated')
default: return 'Unknown'
}
}
function getCategoryName(categoryId: string, categories: Category[]): string {
const cat = categories.find(c => c.id === categoryId)
return cat ? `${cat.icon} ${cat.name}` : categoryId
}
function readLicenseFile(): string | null {
try {
const licensePath = join(homedir(), '.brainy', 'license')
if (existsSync(licensePath)) {
return readFileSync(licensePath, 'utf8').trim()
}
} catch (error) {
// License file read failed, return null
console.debug('Failed to read license file:', error)
}
return null
}
function getDefaultCatalog(): Catalog {
// Local catalog with current features
return {
version: '1.5.0',
categories: [
{ id: 'core', name: 'Core Features', icon: '🧠', description: 'Essential brainy functionality' },
{ id: 'neural', name: 'Neural API', icon: '🔗', description: 'Semantic similarity and clustering' },
{ id: 'enterprise', name: 'Enterprise', icon: '🏢', description: 'Business integrations' },
{ id: 'storage', name: 'Storage', icon: '💾', description: 'Data persistence and caching' }
],
augmentations: [
{
id: 'vector-search',
name: 'Vector Search',
category: 'core',
description: 'High-performance semantic search with HNSW indexing',
status: 'available',
popular: true
},
{
id: 'neural-similarity',
name: 'Neural Similarity API',
category: 'neural',
description: 'Advanced semantic similarity, clustering, and hierarchy detection',
status: 'available',
popular: true
},
{
id: 'intelligent-verb-scoring',
name: 'Intelligent Verb Scoring',
category: 'neural',
description: 'Smart relationship scoring with taxonomy understanding',
status: 'available'
},
{
id: 'connection-pooling',
name: 'Connection Pooling',
category: 'enterprise',
description: 'Efficient database connection management',
status: 'available'
},
{
id: 'batch-processing',
name: 'Batch Processing',
category: 'enterprise',
description: 'High-throughput batch operations with deduplication',
status: 'available'
},
{
id: 's3-storage',
name: 'S3 Compatible Storage',
category: 'storage',
description: 'Cloud storage with optimized batch operations',
status: 'available'
},
{
id: 'opfs-storage',
name: 'OPFS Storage',
category: 'storage',
description: 'Browser-based persistent storage',
status: 'available'
}
]
}
}

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/**
* Cached Embeddings - Performance Optimization Layer
*
* Provides pre-computed embeddings for common terms to avoid
* unnecessary model calls. Falls back to EmbeddingManager for
* unknown terms.
*
* This is purely a performance optimization - it doesn't affect
* the consistency or accuracy of embeddings.
*/
import { Vector } from '../coreTypes.js'
import { embeddingManager } from './EmbeddingManager.js'
// Pre-computed embeddings for top common terms
// In production, this could be loaded from a file or expanded significantly
const PRECOMPUTED_EMBEDDINGS: Record<string, Vector> = {
// Programming languages
'javascript': new Array(384).fill(0).map((_, i) => Math.sin(i * 0.1)),
'python': new Array(384).fill(0).map((_, i) => Math.cos(i * 0.1)),
'typescript': new Array(384).fill(0).map((_, i) => Math.sin(i * 0.15)),
'java': new Array(384).fill(0).map((_, i) => Math.cos(i * 0.15)),
'rust': new Array(384).fill(0).map((_, i) => Math.sin(i * 0.2)),
'go': new Array(384).fill(0).map((_, i) => Math.cos(i * 0.2)),
'c++': new Array(384).fill(0).map((_, i) => Math.sin(i * 0.22)),
'c#': new Array(384).fill(0).map((_, i) => Math.cos(i * 0.22)),
// Web frameworks
'react': new Array(384).fill(0).map((_, i) => Math.sin(i * 0.25)),
'vue': new Array(384).fill(0).map((_, i) => Math.cos(i * 0.25)),
'angular': new Array(384).fill(0).map((_, i) => Math.sin(i * 0.3)),
'svelte': new Array(384).fill(0).map((_, i) => Math.cos(i * 0.3)),
'nextjs': new Array(384).fill(0).map((_, i) => Math.sin(i * 0.32)),
'nuxt': new Array(384).fill(0).map((_, i) => Math.cos(i * 0.32)),
// Databases
'postgresql': new Array(384).fill(0).map((_, i) => Math.sin(i * 0.35)),
'mysql': new Array(384).fill(0).map((_, i) => Math.cos(i * 0.35)),
'mongodb': new Array(384).fill(0).map((_, i) => Math.sin(i * 0.4)),
'redis': new Array(384).fill(0).map((_, i) => Math.cos(i * 0.4)),
'elasticsearch': new Array(384).fill(0).map((_, i) => Math.sin(i * 0.42)),
// Common tech terms
'database': new Array(384).fill(0).map((_, i) => Math.sin(i * 0.45)),
'api': new Array(384).fill(0).map((_, i) => Math.cos(i * 0.45)),
'server': new Array(384).fill(0).map((_, i) => Math.sin(i * 0.5)),
'client': new Array(384).fill(0).map((_, i) => Math.cos(i * 0.5)),
'frontend': new Array(384).fill(0).map((_, i) => Math.sin(i * 0.55)),
'backend': new Array(384).fill(0).map((_, i) => Math.cos(i * 0.55)),
'fullstack': new Array(384).fill(0).map((_, i) => Math.sin(i * 0.57)),
'devops': new Array(384).fill(0).map((_, i) => Math.cos(i * 0.57)),
'cloud': new Array(384).fill(0).map((_, i) => Math.sin(i * 0.6)),
'docker': new Array(384).fill(0).map((_, i) => Math.cos(i * 0.6)),
'kubernetes': new Array(384).fill(0).map((_, i) => Math.sin(i * 0.62)),
'microservices': new Array(384).fill(0).map((_, i) => Math.cos(i * 0.62)),
}
/**
* Simple character n-gram based embedding for short text
* This is much faster than using the model for simple terms
*/
function computeSimpleEmbedding(text: string): Vector {
const normalized = text.toLowerCase().trim()
const vector = new Array(384).fill(0)
// Character trigrams for simple semantic similarity
for (let i = 0; i < normalized.length - 2; i++) {
const trigram = normalized.slice(i, i + 3)
const hash = trigram.charCodeAt(0) * 31 +
trigram.charCodeAt(1) * 7 +
trigram.charCodeAt(2)
const index = Math.abs(hash) % 384
vector[index] += 1 / (normalized.length - 2)
}
// Normalize vector
const magnitude = Math.sqrt(vector.reduce((sum, val) => sum + val * val, 0))
if (magnitude > 0) {
for (let i = 0; i < vector.length; i++) {
vector[i] /= magnitude
}
}
return vector
}
/**
* Cached Embeddings with fallback to EmbeddingManager
*/
export class CachedEmbeddings {
private stats = {
cacheHits: 0,
simpleComputes: 0,
modelCalls: 0
}
/**
* Generate embedding with caching
*/
async embed(text: string | string[]): Promise<Vector | Vector[]> {
if (Array.isArray(text)) {
return Promise.all(text.map(t => this.embedSingle(t)))
}
return this.embedSingle(text)
}
/**
* Embed single text with cache lookup
*/
private async embedSingle(text: string): Promise<Vector> {
const normalized = text.toLowerCase().trim()
// 1. Check pre-computed cache (instant, zero cost)
if (PRECOMPUTED_EMBEDDINGS[normalized]) {
this.stats.cacheHits++
return PRECOMPUTED_EMBEDDINGS[normalized]
}
// 2. Check for partial matches in cache
for (const [term, embedding] of Object.entries(PRECOMPUTED_EMBEDDINGS)) {
if (normalized.includes(term) || term.includes(normalized)) {
this.stats.cacheHits++
// Return slightly modified version to maintain uniqueness
return embedding.map(v => v * 0.95)
}
}
// 3. For short text, use simple embedding (fast, low cost)
if (normalized.length < 50 && normalized.split(' ').length < 5) {
this.stats.simpleComputes++
return computeSimpleEmbedding(normalized)
}
// 4. Fall back to EmbeddingManager for complex text
this.stats.modelCalls++
return await embeddingManager.embed(text)
}
/**
* Get cache statistics
*/
getStats() {
return {
...this.stats,
totalEmbeddings: this.stats.cacheHits + this.stats.simpleComputes + this.stats.modelCalls,
cacheHitRate: this.stats.cacheHits /
(this.stats.cacheHits + this.stats.simpleComputes + this.stats.modelCalls) || 0
}
}
/**
* Add custom pre-computed embeddings
*/
addPrecomputed(term: string, embedding: Vector) {
if (embedding.length !== 384) {
throw new Error('Embedding must have 384 dimensions')
}
PRECOMPUTED_EMBEDDINGS[term.toLowerCase()] = embedding
}
}
// Export singleton instance
export const cachedEmbeddings = new CachedEmbeddings()

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/**
* Embeddings Module - Clean, Unified Architecture
*
* This module provides all embedding functionality for Brainy.
*
* Main Components:
* - EmbeddingManager: Core embedding generation with Q8/FP32 support
* - CachedEmbeddings: Performance optimization layer with pre-computed embeddings
*/
// Core embedding functionality
export {
EmbeddingManager,
embeddingManager,
embed,
getEmbeddingFunction,
getEmbeddingStats,
type ModelPrecision
} from './EmbeddingManager.js'
// Cached embeddings for performance
export {
CachedEmbeddings,
cachedEmbeddings
} from './CachedEmbeddings.js'
// Default export is the singleton manager
export { embeddingManager as default } from './EmbeddingManager.js'

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@ -1,523 +0,0 @@
/**
* Advanced Graph Pathfinding Algorithms
* Provides shortest path, multi-hop traversal, and path ranking
*/
// Graph pathfinding doesn't need to import from coreTypes
export interface GraphNode {
id: string
[key: string]: any
}
export interface GraphEdge {
source: string
target: string
type: string
weight: number
metadata?: any
}
export interface Path {
nodes: string[]
edges: GraphEdge[]
totalWeight: number
length: number
}
export interface PathfindingOptions {
maxDepth?: number
maxPaths?: number
bidirectional?: boolean
weightField?: string
relationshipTypes?: string[]
nodeFilter?: (node: GraphNode) => boolean
edgeFilter?: (edge: GraphEdge) => boolean
}
export class GraphPathfinding {
private adjacencyList: Map<string, Map<string, GraphEdge[]>> = new Map()
private nodes: Map<string, GraphNode> = new Map()
/**
* Add a node to the graph
*/
public addNode(node: GraphNode): void {
this.nodes.set(node.id, node)
if (!this.adjacencyList.has(node.id)) {
this.adjacencyList.set(node.id, new Map())
}
}
/**
* Add an edge to the graph
*/
public addEdge(edge: GraphEdge): void {
// Ensure nodes exist
if (!this.adjacencyList.has(edge.source)) {
this.adjacencyList.set(edge.source, new Map())
}
if (!this.adjacencyList.has(edge.target)) {
this.adjacencyList.set(edge.target, new Map())
}
// Add edge to adjacency list
const sourceEdges = this.adjacencyList.get(edge.source)!
if (!sourceEdges.has(edge.target)) {
sourceEdges.set(edge.target, [])
}
sourceEdges.get(edge.target)!.push(edge)
}
/**
* Find shortest path using Dijkstra's algorithm
* O((V + E) log V) with binary heap
*/
public shortestPath(
start: string,
end: string,
options: PathfindingOptions = {}
): Path | null {
const {
maxDepth = Infinity,
relationshipTypes,
edgeFilter
} = options
// Priority queue: [nodeId, distance, path]
const pq: Array<[string, number, string[], GraphEdge[]]> = [[start, 0, [start], []]]
const visited = new Set<string>()
const distances = new Map<string, number>([[start, 0]])
while (pq.length > 0) {
// Sort by distance (simple array, could optimize with heap)
pq.sort((a, b) => a[1] - b[1])
const [current, distance, path, edges] = pq.shift()!
if (visited.has(current)) continue
visited.add(current)
// Found target
if (current === end) {
return {
nodes: path,
edges,
totalWeight: distance,
length: path.length - 1
}
}
// Max depth reached
if (path.length > maxDepth) continue
// Explore neighbors
const neighbors = this.adjacencyList.get(current)
if (!neighbors) continue
for (const [neighbor, edgeList] of neighbors) {
if (visited.has(neighbor)) continue
// Find best edge to neighbor
let bestEdge: GraphEdge | null = null
let bestWeight = Infinity
for (const edge of edgeList) {
// Apply filters
if (relationshipTypes && !relationshipTypes.includes(edge.type)) continue
if (edgeFilter && !edgeFilter(edge)) continue
if (edge.weight < bestWeight) {
bestWeight = edge.weight
bestEdge = edge
}
}
if (!bestEdge) continue
const newDistance = distance + bestWeight
const currentBest = distances.get(neighbor) ?? Infinity
if (newDistance < currentBest) {
distances.set(neighbor, newDistance)
pq.push([
neighbor,
newDistance,
[...path, neighbor],
[...edges, bestEdge]
])
}
}
}
return null // No path found
}
/**
* Find all paths between two nodes
* Uses DFS with cycle detection
*/
public allPaths(
start: string,
end: string,
options: PathfindingOptions = {}
): Path[] {
const {
maxDepth = 10,
maxPaths = 100,
relationshipTypes,
edgeFilter
} = options
const paths: Path[] = []
const visited = new Set<string>()
const dfs = (
current: string,
path: string[],
edges: GraphEdge[],
weight: number
): void => {
if (paths.length >= maxPaths) return
if (path.length > maxDepth) return
if (current === end && path.length > 1) {
paths.push({
nodes: [...path],
edges: [...edges],
totalWeight: weight,
length: path.length - 1
})
return
}
visited.add(current)
const neighbors = this.adjacencyList.get(current)
if (neighbors) {
for (const [neighbor, edgeList] of neighbors) {
if (visited.has(neighbor)) continue
for (const edge of edgeList) {
// Apply filters
if (relationshipTypes && !relationshipTypes.includes(edge.type)) continue
if (edgeFilter && !edgeFilter(edge)) continue
dfs(
neighbor,
[...path, neighbor],
[...edges, edge],
weight + edge.weight
)
}
}
}
visited.delete(current)
}
dfs(start, [start], [], 0)
// Sort paths by weight
paths.sort((a, b) => a.totalWeight - b.totalWeight)
return paths
}
/**
* Bidirectional search for faster pathfinding
* Searches from both start and end simultaneously
*/
public bidirectionalSearch(
start: string,
end: string,
options: PathfindingOptions = {}
): Path | null {
const { maxDepth = 10 } = options
// Two search frontiers
const forwardVisited = new Map<string, { path: string[], edges: GraphEdge[], weight: number }>()
const backwardVisited = new Map<string, { path: string[], edges: GraphEdge[], weight: number }>()
forwardVisited.set(start, { path: [start], edges: [], weight: 0 })
backwardVisited.set(end, { path: [end], edges: [], weight: 0 })
const forwardQueue = [start]
const backwardQueue = [end]
let depth = 0
while (
(forwardQueue.length > 0 || backwardQueue.length > 0) &&
depth < maxDepth
) {
// Expand forward frontier
const forwardNext: string[] = []
for (const current of forwardQueue) {
const currentData = forwardVisited.get(current)!
const neighbors = this.adjacencyList.get(current)
if (neighbors) {
for (const [neighbor, edges] of neighbors) {
if (forwardVisited.has(neighbor)) continue
// Select edge with lowest weight for optimal path
const bestEdge = edges.reduce((best, edge) =>
edge.weight < best.weight ? edge : best, edges[0])
forwardVisited.set(neighbor, {
path: [...currentData.path, neighbor],
edges: [...currentData.edges, bestEdge],
weight: currentData.weight + bestEdge.weight
})
// Check if we met the backward search
if (backwardVisited.has(neighbor)) {
const forward = forwardVisited.get(neighbor)!
const backward = backwardVisited.get(neighbor)!
// Combine paths
const fullPath = [
...forward.path,
...backward.path.slice(1).reverse()
]
// Reverse backward edges and combine
const backwardEdgesReversed = backward.edges
.map(e => ({
...e,
source: e.target,
target: e.source
}))
.reverse()
return {
nodes: fullPath,
edges: [...forward.edges, ...backwardEdgesReversed],
totalWeight: forward.weight + backward.weight,
length: fullPath.length - 1
}
}
forwardNext.push(neighbor)
}
}
}
// Expand backward frontier
const backwardNext: string[] = []
for (const current of backwardQueue) {
const currentData = backwardVisited.get(current)!
// For backward search, we need to look at incoming edges
for (const [nodeId, neighbors] of this.adjacencyList) {
const edges = neighbors.get(current)
if (!edges) continue
if (backwardVisited.has(nodeId)) continue
// Select edge with lowest weight for optimal path
const bestEdge = edges.reduce((best, edge) =>
edge.weight < best.weight ? edge : best, edges[0])
backwardVisited.set(nodeId, {
path: [...currentData.path, nodeId],
edges: [...currentData.edges, bestEdge],
weight: currentData.weight + bestEdge.weight
})
// Check if we met the forward search
if (forwardVisited.has(nodeId)) {
const forward = forwardVisited.get(nodeId)!
const backward = backwardVisited.get(nodeId)!
// Combine paths
const fullPath = [
...forward.path,
...backward.path.slice(1).reverse()
]
// Reverse backward edges and combine
const backwardEdgesReversed = backward.edges
.map(e => ({
...e,
source: e.target,
target: e.source
}))
.reverse()
return {
nodes: fullPath,
edges: [...forward.edges, ...backwardEdgesReversed],
totalWeight: forward.weight + backward.weight,
length: fullPath.length - 1
}
}
backwardNext.push(nodeId)
}
}
forwardQueue.splice(0, forwardQueue.length, ...forwardNext)
backwardQueue.splice(0, backwardQueue.length, ...backwardNext)
depth++
}
return null
}
/**
* Multi-hop traversal (e.g., friends of friends)
* Returns all nodes within N hops
*/
public multiHopTraversal(
start: string,
hops: number,
options: PathfindingOptions = {}
): Map<string, { distance: number, paths: Path[] }> {
const { relationshipTypes, nodeFilter, edgeFilter } = options
const results = new Map<string, { distance: number, paths: Path[] }>()
const visited = new Set<string>()
const queue: Array<{ node: string, distance: number, path: string[], edges: GraphEdge[] }> = [
{ node: start, distance: 0, path: [start], edges: [] }
]
while (queue.length > 0) {
const { node, distance, path, edges } = queue.shift()!
if (distance > hops) continue
// Record this node
if (!results.has(node)) {
results.set(node, { distance, paths: [] })
}
results.get(node)!.paths.push({
nodes: path,
edges,
totalWeight: edges.reduce((sum, e) => sum + e.weight, 0),
length: path.length - 1
})
if (distance === hops) continue
// Explore neighbors
const neighbors = this.adjacencyList.get(node)
if (neighbors) {
for (const [neighbor, edgeList] of neighbors) {
// Apply node filter
if (nodeFilter) {
const neighborNode = this.nodes.get(neighbor)
if (neighborNode && !nodeFilter(neighborNode)) continue
}
for (const edge of edgeList) {
// Apply filters
if (relationshipTypes && !relationshipTypes.includes(edge.type)) continue
if (edgeFilter && !edgeFilter(edge)) continue
queue.push({
node: neighbor,
distance: distance + 1,
path: [...path, neighbor],
edges: [...edges, edge]
})
}
}
}
}
return results
}
/**
* Find connected components using DFS
*/
public connectedComponents(): Array<Set<string>> {
const visited = new Set<string>()
const components: Array<Set<string>> = []
const dfs = (node: string, component: Set<string>): void => {
visited.add(node)
component.add(node)
const neighbors = this.adjacencyList.get(node)
if (neighbors) {
for (const neighbor of neighbors.keys()) {
if (!visited.has(neighbor)) {
dfs(neighbor, component)
}
}
}
}
for (const node of this.adjacencyList.keys()) {
if (!visited.has(node)) {
const component = new Set<string>()
dfs(node, component)
components.push(component)
}
}
return components
}
/**
* Calculate PageRank for all nodes
* Useful for ranking importance in the graph
*/
public pageRank(iterations: number = 100, damping: number = 0.85): Map<string, number> {
const nodes = Array.from(this.adjacencyList.keys())
const n = nodes.length
if (n === 0) return new Map()
// Initialize ranks
const ranks = new Map<string, number>()
for (const node of nodes) {
ranks.set(node, 1 / n)
}
// Calculate outgoing edge counts
const outDegree = new Map<string, number>()
for (const [node, neighbors] of this.adjacencyList) {
let count = 0
for (const edges of neighbors.values()) {
count += edges.length
}
outDegree.set(node, count)
}
// Iterate PageRank algorithm
for (let i = 0; i < iterations; i++) {
const newRanks = new Map<string, number>()
for (const node of nodes) {
let rank = (1 - damping) / n
// Sum contributions from incoming edges
for (const [source, neighbors] of this.adjacencyList) {
if (neighbors.has(node)) {
const sourceRank = ranks.get(source) ?? 0
const sourceOutDegree = outDegree.get(source) ?? 1
rank += damping * (sourceRank / sourceOutDegree)
}
}
newRanks.set(node, rank)
}
// Update ranks
for (const [node, rank] of newRanks) {
ranks.set(node, rank)
}
}
return ranks
}
/**
* Clear the graph
*/
public clear(): void {
this.adjacencyList.clear()
this.nodes.clear()
}
}

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/**
* Entity Deduplicator
*
* Finds and merges duplicate entities across imports using:
* - Embedding-based similarity matching
* - Type-aware comparison
* - Confidence-weighted merging
* - Provenance tracking
*
* NO MOCKS - Production-ready implementation
*/
import { Brainy } from '../brainy.js'
import { NounType } from '../types/graphTypes.js'
export interface EntityCandidate {
id?: string
name: string
type: NounType
description: string
confidence: number
metadata: Record<string, any>
}
export interface DuplicateMatch {
existingId: string
existingName: string
similarity: number
shouldMerge: boolean
reason: string
}
export interface EntityDeduplicationOptions {
/** Similarity threshold for considering entities as duplicates (0-1) */
similarityThreshold?: number
/** Only match entities of the same type */
strictTypeMatching?: boolean
/** Enable fuzzy name matching */
enableFuzzyMatching?: boolean
/** Minimum confidence to consider for merging */
minConfidence?: number
}
export interface MergeResult {
mergedEntityId: string
wasMerged: boolean
mergedWith?: string
confidence: number
provenance: string[]
}
/**
* EntityDeduplicator - Prevents duplicate entities across imports
*/
export class EntityDeduplicator {
private brain: Brainy
constructor(brain: Brainy) {
this.brain = brain
}
/**
* Find duplicate entities in the knowledge graph
*/
async findDuplicates(
candidate: EntityCandidate,
options: EntityDeduplicationOptions = {}
): Promise<DuplicateMatch | null> {
const opts = {
similarityThreshold: options.similarityThreshold || 0.85,
strictTypeMatching: options.strictTypeMatching !== false,
enableFuzzyMatching: options.enableFuzzyMatching !== false,
minConfidence: options.minConfidence || 0.6
}
// Skip low-confidence candidates
if (candidate.confidence < opts.minConfidence) {
return null
}
// Search for similar entities by name and description
const searchText = `${candidate.name} ${candidate.description}`.trim()
try {
const results = await this.brain.find({
query: searchText,
limit: 5,
where: opts.strictTypeMatching ? { type: candidate.type } : undefined
})
// Check each result for potential duplicates
for (const result of results) {
const similarity = result.score || 0
const existingName = result.entity.metadata?.name || result.id
const existingType = result.entity.metadata?.type || result.entity.metadata?.nounType || result.entity.type
// Skip if below similarity threshold
if (similarity < opts.similarityThreshold) {
continue
}
// Type matching check
if (opts.strictTypeMatching && existingType !== candidate.type) {
continue
}
// Exact name match (case-insensitive)
if (this.normalizeString(candidate.name) === this.normalizeString(existingName)) {
return {
existingId: result.id,
existingName,
similarity: 1.0,
shouldMerge: true,
reason: 'Exact name match'
}
}
// High similarity match
if (similarity >= opts.similarityThreshold) {
// Additional validation for fuzzy matching
if (opts.enableFuzzyMatching && this.areSimilarNames(candidate.name, existingName)) {
return {
existingId: result.id,
existingName,
similarity,
shouldMerge: true,
reason: `High similarity (${(similarity * 100).toFixed(1)}%)`
}
}
}
}
} catch (error) {
// If search fails, assume no duplicates
return null
}
return null
}
/**
* Merge entity data with existing entity
*/
async mergeEntity(
existingId: string,
candidate: EntityCandidate,
importSource: string
): Promise<MergeResult> {
try {
// Get existing entity
const existing = await this.brain.get(existingId)
if (!existing) {
throw new Error(`Entity ${existingId} not found`)
}
// Update confidence (weighted average) — `confidence` is a reserved
// top-level field, so it travels via the dedicated update() param, not
// the metadata bag.
const mergedConfidence = this.mergeConfidence(
existing.confidence ?? 0.5,
candidate.confidence
)
// Merge metadata (custom fields only — reserved fields are top-level)
const mergedMetadata = {
...existing.metadata,
// Track provenance
imports: [
...(existing.metadata?.imports || []),
importSource
],
// Merge VFS paths
vfsPaths: [
...(existing.metadata?.vfsPaths || [existing.metadata?.vfsPath]).filter(Boolean),
candidate.metadata?.vfsPath
].filter(Boolean),
// Merge other metadata
...this.mergeMetadataFields(existing.metadata, candidate.metadata),
// Track last update
lastUpdated: Date.now(),
mergeCount: (existing.metadata?.mergeCount || 0) + 1
}
// Update entity
await this.brain.update({
id: existingId,
confidence: mergedConfidence,
metadata: mergedMetadata,
merge: true
})
return {
mergedEntityId: existingId,
wasMerged: true,
mergedWith: existing.metadata?.name || existingId,
confidence: mergedConfidence,
provenance: mergedMetadata.imports
}
} catch (error) {
throw new Error(`Failed to merge entity: ${error instanceof Error ? error.message : String(error)}`)
}
}
/**
* Create or merge entity with deduplication
*/
async createOrMerge(
candidate: EntityCandidate,
importSource: string,
options: EntityDeduplicationOptions = {}
): Promise<MergeResult> {
// Check for duplicates
const duplicate = await this.findDuplicates(candidate, options)
if (duplicate && duplicate.shouldMerge) {
// Merge with existing entity
return await this.mergeEntity(duplicate.existingId, candidate, importSource)
}
// No duplicate found, create new entity. Preserve any subtype the candidate
// carried (set by the extractor or upstream importer), else fall back to
// `'imported'` so enforcement doesn't fire (added 7.30.1).
// `confidence` is a reserved top-level field (dedicated add() param);
// creation time is system-managed — neither belongs in the metadata bag.
const entityId = await this.brain.add({
data: candidate.description || candidate.name,
type: candidate.type,
subtype:
(candidate as EntityCandidate & { subtype?: string }).subtype ??
'imported',
confidence: candidate.confidence,
metadata: {
...candidate.metadata,
name: candidate.name,
imports: [importSource],
vfsPaths: [candidate.metadata?.vfsPath].filter(Boolean),
mergeCount: 0
}
})
// Update candidate with new ID
candidate.id = entityId
return {
mergedEntityId: entityId,
wasMerged: false,
confidence: candidate.confidence,
provenance: [importSource]
}
}
/**
* Normalize string for comparison
*/
private normalizeString(str: string): string {
return str
.toLowerCase()
.trim()
.replace(/[^a-z0-9]/g, '')
}
/**
* Check if two names are similar (fuzzy matching)
*/
private areSimilarNames(name1: string, name2: string): boolean {
const n1 = this.normalizeString(name1)
const n2 = this.normalizeString(name2)
// Exact match
if (n1 === n2) return true
// Length difference check
const lengthDiff = Math.abs(n1.length - n2.length)
if (lengthDiff > 3) return false
// Levenshtein distance
const distance = this.levenshteinDistance(n1, n2)
const maxLength = Math.max(n1.length, n2.length)
const similarity = 1 - (distance / maxLength)
return similarity >= 0.85
}
/**
* Calculate Levenshtein distance between two strings
*/
private levenshteinDistance(str1: string, str2: string): number {
const m = str1.length
const n = str2.length
const dp: number[][] = Array(m + 1).fill(null).map(() => Array(n + 1).fill(0))
for (let i = 0; i <= m; i++) dp[i][0] = i
for (let j = 0; j <= n; j++) dp[0][j] = j
for (let i = 1; i <= m; i++) {
for (let j = 1; j <= n; j++) {
if (str1[i - 1] === str2[j - 1]) {
dp[i][j] = dp[i - 1][j - 1]
} else {
dp[i][j] = Math.min(
dp[i - 1][j] + 1, // deletion
dp[i][j - 1] + 1, // insertion
dp[i - 1][j - 1] + 1 // substitution
)
}
}
}
return dp[m][n]
}
/**
* Merge confidence scores (weighted average favoring higher confidence)
*/
private mergeConfidence(existing: number, incoming: number): number {
// Weight higher confidence more heavily
const weights = existing > incoming ? [0.6, 0.4] : [0.4, 0.6]
return existing * weights[0] + incoming * weights[1]
}
/**
* Merge metadata fields intelligently
*/
private mergeMetadataFields(
existing: Record<string, any>,
incoming: Record<string, any>
): Record<string, any> {
const merged: Record<string, any> = {}
// Merge arrays
const arrayFields = ['concepts', 'tags', 'categories']
for (const field of arrayFields) {
if (existing[field] || incoming[field]) {
const combined = [
...(existing[field] || []),
...(incoming[field] || [])
]
// Deduplicate
merged[field] = [...new Set(combined)]
}
}
// Prefer longer descriptions
if (existing.description || incoming.description) {
merged.description = (existing.description || '').length > (incoming.description || '').length
? existing.description
: incoming.description
}
return merged
}
}

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/**
* InstancePool - Shared instance management for memory efficiency
*
* Production-grade instance pooling to prevent memory leaks during imports.
* Critical for scaling to billions of entities.
*
* Problem: Creating new NLP/Extractor instances in loops memory leak
* Solution: Reuse shared instances across entire import session
*
* Memory savings:
* - Without pooling: 100K rows × 50MB per instance = 5TB RAM (OOM!)
* - With pooling: 50MB total (shared across all rows)
*/
import { Brainy } from '../brainy.js'
import { NaturalLanguageProcessor } from '../neural/naturalLanguageProcessor.js'
import { NeuralEntityExtractor } from '../neural/entityExtractor.js'
/**
* InstancePool - Manages shared instances for memory efficiency
*
* Lifecycle:
* 1. Create pool at import start
* 2. Reuse instances across all rows
* 3. Pool is garbage collected when import completes
*
* Thread safety: Not thread-safe (single import session per pool)
*/
export class InstancePool {
private brain: Brainy
// Shared instances (created lazily)
private nlpInstance: NaturalLanguageProcessor | null = null
private extractorInstance: NeuralEntityExtractor | null = null
// Initialization state
private nlpInitialized = false
private initializationPromise: Promise<void> | null = null
// Statistics
private stats = {
nlpReuses: 0,
extractorReuses: 0,
creationTime: 0
}
constructor(brain: Brainy) {
this.brain = brain
}
/**
* Get shared NaturalLanguageProcessor instance
*
* Lazy initialization - created on first access
* All subsequent calls return same instance
*
* @returns Shared NLP instance
*/
async getNLP(): Promise<NaturalLanguageProcessor> {
if (!this.nlpInstance) {
const startTime = Date.now()
this.nlpInstance = new NaturalLanguageProcessor(this.brain)
this.stats.creationTime += Date.now() - startTime
}
// Ensure initialized before returning
if (!this.nlpInitialized) {
await this.ensureNLPInitialized()
}
this.stats.nlpReuses++
return this.nlpInstance
}
/**
* Get shared NeuralEntityExtractor instance
*
* Lazy initialization - created on first access
* All subsequent calls return same instance
*
* @returns Shared extractor instance
*/
getExtractor(): NeuralEntityExtractor {
if (!this.extractorInstance) {
const startTime = Date.now()
this.extractorInstance = new NeuralEntityExtractor(this.brain)
this.stats.creationTime += Date.now() - startTime
}
this.stats.extractorReuses++
return this.extractorInstance
}
/**
* Get shared NLP instance (synchronous, may return uninitialized)
*
* Use when you need NLP synchronously and will handle initialization yourself.
* Prefer getNLP() for async code.
*
* @returns Shared NLP instance (possibly uninitialized)
*/
getNLPSync(): NaturalLanguageProcessor {
if (!this.nlpInstance) {
this.nlpInstance = new NaturalLanguageProcessor(this.brain)
}
this.stats.nlpReuses++
return this.nlpInstance
}
/**
* Initialize all instances upfront
*
* Call at start of import to avoid lazy initialization overhead
* during processing. Improves predictability and first-row performance.
*
* @returns Promise that resolves when all instances are ready
*/
async init(): Promise<void> {
// Prevent duplicate initialization
if (this.initializationPromise) {
return this.initializationPromise
}
this.initializationPromise = this.initializeInternal()
return this.initializationPromise
}
/**
* Internal initialization implementation
*/
private async initializeInternal(): Promise<void> {
const startTime = Date.now()
// Create instances
if (!this.nlpInstance) {
this.nlpInstance = new NaturalLanguageProcessor(this.brain)
}
if (!this.extractorInstance) {
this.extractorInstance = new NeuralEntityExtractor(this.brain)
}
// Initialize NLP (loads pattern library)
await this.ensureNLPInitialized()
this.stats.creationTime = Date.now() - startTime
}
/**
* Ensure NLP is initialized (loads 220 patterns)
*
* Handles concurrent initialization requests safely
*/
private async ensureNLPInitialized(): Promise<void> {
if (this.nlpInitialized) {
return
}
if (!this.nlpInstance) {
throw new Error('NLP instance not created yet')
}
await this.nlpInstance.init()
this.nlpInitialized = true
}
/**
* Check if instances are initialized
*
* @returns True if NLP is initialized and ready to use
*/
isInitialized(): boolean {
return this.nlpInitialized && this.nlpInstance !== null
}
/**
* Get pool statistics
*
* Useful for performance monitoring and memory leak detection
*
* @returns Statistics about instance reuse
*/
getStats() {
return {
...this.stats,
nlpCreated: this.nlpInstance !== null,
extractorCreated: this.extractorInstance !== null,
initialized: this.isInitialized(),
// Memory savings estimate
memorySaved: this.calculateMemorySaved()
}
}
/**
* Calculate estimated memory saved by pooling
*
* Assumes ~50MB per NLP instance, ~10MB per extractor instance
*
* @returns Estimated memory saved in bytes
*/
private calculateMemorySaved(): number {
const nlpSize = 50 * 1024 * 1024 // 50MB per instance
const extractorSize = 10 * 1024 * 1024 // 10MB per instance
// Without pooling: size × reuses
// With pooling: size × 1
// Saved: size × (reuses - 1)
const nlpSaved = nlpSize * Math.max(0, this.stats.nlpReuses - 1)
const extractorSaved = extractorSize * Math.max(0, this.stats.extractorReuses - 1)
return nlpSaved + extractorSaved
}
/**
* Reset statistics (useful for testing)
*/
resetStats(): void {
this.stats = {
nlpReuses: 0,
extractorReuses: 0,
creationTime: 0
}
}
/**
* Get string representation (for debugging)
*/
toString(): string {
const stats = this.getStats()
return `InstancePool(nlp=${stats.nlpCreated}, extractor=${stats.extractorCreated}, initialized=${stats.initialized}, nlpReuses=${stats.nlpReuses}, extractorReuses=${stats.extractorReuses})`
}
/**
* Cleanup method (for explicit resource management)
*
* Note: Usually not needed - pool is garbage collected when import completes.
* Use only if you need explicit cleanup for some reason.
*/
cleanup(): void {
// Clear references to allow garbage collection
this.nlpInstance = null
this.extractorInstance = null
this.nlpInitialized = false
this.initializationPromise = null
}
}
/**
* Create a new instance pool
*
* Convenience factory function
*
* @param brain Brainy instance
* @param autoInit Whether to initialize instances immediately
* @returns Instance pool
*/
export async function createInstancePool(
brain: Brainy,
autoInit = true
): Promise<InstancePool> {
const pool = new InstancePool(brain)
if (autoInit) {
await pool.init()
}
return pool
}

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@ -1,38 +0,0 @@
/**
* Unified Import System
*
* Single entry point for importing any file format into Brainy with:
* - Auto-detection of formats
* - Dual storage (VFS + Knowledge Graph)
* - Shared entities across imports (deduplication)
* - Simple, powerful API
*/
export { ImportCoordinator } from './ImportCoordinator.js'
export { FormatDetector, SupportedFormat, DetectionResult } from './FormatDetector.js'
export { EntityDeduplicator } from './EntityDeduplicator.js'
export { BackgroundDeduplicator } from './BackgroundDeduplicator.js'
export { ImportHistory } from './ImportHistory.js'
export type {
ImportSource,
ImportOptions,
ImportProgress,
ImportResult
} from './ImportCoordinator.js'
export type {
EntityCandidate,
DuplicateMatch,
EntityDeduplicationOptions,
MergeResult
} from './EntityDeduplicator.js'
export type {
DeduplicationStats
} from './BackgroundDeduplicator.js'
export type {
ImportHistoryEntry,
RollbackResult
} from './ImportHistory.js'

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@ -1,789 +0,0 @@
/**
* Smart Import Orchestrator
*
* Coordinates the entire smart import pipeline:
* 1. Extract entities/relationships using SmartExcelImporter
* 2. Create entities and relationships in Brainy
* 3. Organize into VFS structure using VFSStructureGenerator
*
* NO MOCKS - Production-ready implementation
*/
import { Brainy } from '../brainy.js'
import { VirtualFileSystem } from '../vfs/VirtualFileSystem.js'
import { NounType, VerbType } from '../types/graphTypes.js'
import { splitNounMetadataRecord } from '../types/reservedFields.js'
import { SmartExcelImporter, SmartExcelOptions, SmartExcelResult } from './SmartExcelImporter.js'
import { SmartPDFImporter, SmartPDFOptions, SmartPDFResult } from './SmartPDFImporter.js'
import { SmartCSVImporter, SmartCSVOptions, SmartCSVResult } from './SmartCSVImporter.js'
import { SmartJSONImporter, SmartJSONOptions, SmartJSONResult } from './SmartJSONImporter.js'
import { SmartMarkdownImporter, SmartMarkdownOptions, SmartMarkdownResult } from './SmartMarkdownImporter.js'
import { VFSStructureGenerator, VFSStructureOptions } from './VFSStructureGenerator.js'
export interface SmartImportOptions extends SmartExcelOptions {
/** Create VFS structure */
createVFSStructure?: boolean
/** VFS root path */
vfsRootPath?: string
/** VFS grouping strategy */
vfsGroupBy?: 'type' | 'sheet' | 'flat' | 'custom'
/** Create entities in Brainy */
createEntities?: boolean
/** Create relationships in Brainy */
createRelationships?: boolean
/** Source filename */
filename?: string
/**
* Default subtype tag for entities + relationships this importer creates when
* the extractor doesn't set one. See `ValidImportOptions.defaultSubtype`
* same semantics, same precedence (extractor > caller default > `'imported'`).
* Added 7.30.1.
*/
defaultSubtype?: string
}
export interface SmartImportProgress {
phase: 'parsing' | 'extracting' | 'creating' | 'relationships' | 'organizing' | 'complete'
message: string
processed: number
total: number
entities: number
relationships: number
}
export interface SmartImportResult {
success: boolean
/** Extraction results */
extraction: SmartExcelResult
/** Created entity IDs */
entityIds: string[]
/** Created relationship IDs */
relationshipIds: string[]
/** VFS structure created */
vfsStructure?: {
rootPath: string
directories: string[]
files: number
}
/** Overall statistics */
stats: {
rowsProcessed: number
entitiesCreated: number
relationshipsCreated: number
filesCreated: number
totalTime: number
}
/** Any errors encountered */
errors: string[]
}
/**
* SmartImportOrchestrator - Main entry point for smart imports
*/
export class SmartImportOrchestrator {
private brain: Brainy
private excelImporter: SmartExcelImporter
private pdfImporter: SmartPDFImporter
private csvImporter: SmartCSVImporter
private jsonImporter: SmartJSONImporter
private markdownImporter: SmartMarkdownImporter
private vfsGenerator: VFSStructureGenerator
constructor(brain: Brainy) {
this.brain = brain
this.excelImporter = new SmartExcelImporter(brain)
this.pdfImporter = new SmartPDFImporter(brain)
this.csvImporter = new SmartCSVImporter(brain)
this.jsonImporter = new SmartJSONImporter(brain)
this.markdownImporter = new SmartMarkdownImporter(brain)
this.vfsGenerator = new VFSStructureGenerator(brain)
}
/**
* Initialize the orchestrator
*/
async init(): Promise<void> {
await this.excelImporter.init()
await this.pdfImporter.init()
await this.csvImporter.init()
await this.jsonImporter.init()
await this.markdownImporter.init()
await this.vfsGenerator.init()
}
/**
* Import Excel file with full pipeline
*/
async importExcel(
buffer: Buffer,
options: SmartImportOptions = {},
onProgress?: (progress: SmartImportProgress) => void
): Promise<SmartImportResult> {
const startTime = Date.now()
const result: SmartImportResult = {
success: false,
// Typed boundary: populated in the extraction phase below. If extraction
// throws, the error path returns with this still null (pre-existing
// contract — consumers check `success`/`errors` before reading it).
extraction: null as unknown as SmartExcelResult,
entityIds: [],
relationshipIds: [],
stats: {
rowsProcessed: 0,
entitiesCreated: 0,
relationshipsCreated: 0,
filesCreated: 0,
totalTime: 0
},
errors: []
}
try {
// Phase 1: Extract entities and relationships
onProgress?.({
phase: 'extracting',
message: 'Extracting entities and relationships...',
processed: 0,
total: 0,
entities: 0,
relationships: 0
})
result.extraction = await this.excelImporter.extract(buffer, {
...options,
onProgress: (stats) => {
onProgress?.({
phase: 'extracting',
message: `Processing row ${stats.processed}/${stats.total}...`,
processed: stats.processed,
total: stats.total,
entities: stats.entities,
relationships: stats.relationships
})
}
})
result.stats.rowsProcessed = result.extraction.rowsProcessed
// Phase 2: Create entities in Brainy
if (options.createEntities !== false) {
onProgress?.({
phase: 'creating',
message: 'Creating entities in knowledge graph...',
processed: 0,
total: result.extraction.rows.length,
entities: 0,
relationships: 0
})
for (let i = 0; i < result.extraction.rows.length; i++) {
const extracted = result.extraction.rows[i]
try {
// Create main entity. Subtype precedence: extractor-set → caller default
// → Brainy default `'imported'` (added 7.30.1).
const entityId = await this.brain.add({
data: extracted.entity.description,
type: extracted.entity.type,
subtype:
(extracted.entity as typeof extracted.entity & { subtype?: string })
.subtype ?? options.defaultSubtype ?? 'imported',
confidence: extracted.entity.confidence, // reserved field — dedicated param, not metadata
metadata: {
// Strip reserved keys an extractor may have smuggled into the bag
// (8.0 reservedFieldPolicy defaults to 'throw').
...splitNounMetadataRecord(extracted.entity.metadata).custom,
name: extracted.entity.name,
importedFrom: 'smart-import'
}
})
result.entityIds.push(entityId)
result.stats.entitiesCreated++
// Update entity ID in extraction result
extracted.entity.id = entityId
onProgress?.({
phase: 'creating',
message: `Created entity: ${extracted.entity.name}`,
processed: i + 1,
total: result.extraction.rows.length,
entities: result.entityIds.length,
relationships: result.relationshipIds.length
})
} catch (error: any) {
result.errors.push(`Failed to create entity ${extracted.entity.name}: ${error.message}`)
}
}
}
// Phase 3: Create relationships
if (options.createRelationships !== false && options.createEntities !== false) {
onProgress?.({
phase: 'creating',
message: 'Preparing relationships...',
processed: 0,
total: result.extraction.rows.length,
entities: result.entityIds.length,
relationships: 0
})
// Build entity name -> ID map
const entityMap = new Map<string, string>()
for (const extracted of result.extraction.rows) {
entityMap.set(extracted.entity.name.toLowerCase(), extracted.entity.id)
}
// Collect all relationship parameters
const relationshipParams: Array<{from: string; to: string; type: VerbType; subtype?: string; confidence?: number; metadata?: any}> = []
for (const extracted of result.extraction.rows) {
for (const rel of extracted.relationships) {
try {
// Find target entity ID
let toEntityId: string | undefined
// Try to find by name in our extracted entities
for (const otherExtracted of result.extraction.rows) {
if (rel.to.toLowerCase().includes(otherExtracted.entity.name.toLowerCase()) ||
otherExtracted.entity.name.toLowerCase().includes(rel.to.toLowerCase())) {
toEntityId = otherExtracted.entity.id
break
}
}
// If not found, create a placeholder entity. `import-placeholder` marks
// these as synthetic targets so consumers can distinguish them from real
// imports and downstream dedup can consolidate (added 7.30.1).
if (!toEntityId) {
toEntityId = await this.brain.add({
data: rel.to,
type: NounType.Thing,
subtype: 'import-placeholder',
metadata: {
name: rel.to,
placeholder: true,
extractedFrom: extracted.entity.name
}
})
result.entityIds.push(toEntityId)
}
// Collect relationship parameter. Subtype precedence: extractor-set rel
// subtype → caller default → Brainy default `'imported'` (added 7.30.1).
relationshipParams.push({
from: extracted.entity.id,
to: toEntityId,
type: rel.type,
subtype:
(rel as typeof rel & { subtype?: string }).subtype ??
options.defaultSubtype ?? 'imported',
confidence: rel.confidence, // reserved field — dedicated param, not metadata
metadata: {
evidence: rel.evidence
}
})
} catch (error: any) {
result.errors.push(`Failed to prepare relationship: ${error.message}`)
}
}
}
// Batch create all relationships with progress
if (relationshipParams.length > 0) {
onProgress?.({
phase: 'relationships',
message: 'Building relationships...',
processed: 0,
total: relationshipParams.length,
entities: result.entityIds.length,
relationships: 0
})
try {
const relationshipIds = await this.brain.relateMany({
items: relationshipParams,
parallel: true,
chunkSize: 100,
continueOnError: true,
onProgress: (done, total) => {
onProgress?.({
phase: 'relationships',
message: `Building relationships: ${done}/${total}`,
processed: done,
total: total,
entities: result.entityIds.length,
relationships: done
})
}
})
result.relationshipIds = relationshipIds
result.stats.relationshipsCreated = relationshipIds.length
} catch (error: any) {
result.errors.push(`Failed to create relationships: ${error.message}`)
}
}
}
// Phase 4: Create VFS structure
if (options.createVFSStructure !== false) {
onProgress?.({
phase: 'organizing',
message: 'Organizing into file structure...',
processed: 0,
total: result.extraction.rows.length,
entities: result.entityIds.length,
relationships: result.relationshipIds.length
})
const vfsOptions: VFSStructureOptions = {
rootPath: options.vfsRootPath || '/imports/' + (options.filename || 'import'),
groupBy: options.vfsGroupBy || 'type',
preserveSource: true,
sourceBuffer: buffer,
sourceFilename: options.filename || 'import.xlsx',
createRelationshipFile: true,
createMetadataFile: true
}
const vfsResult = await this.vfsGenerator.generate(result.extraction, vfsOptions)
result.vfsStructure = {
rootPath: vfsResult.rootPath,
directories: vfsResult.directories,
files: vfsResult.files.length
}
result.stats.filesCreated = vfsResult.files.length
}
// Complete
result.success = result.errors.length === 0
result.stats.totalTime = Date.now() - startTime
onProgress?.({
phase: 'complete',
message: `Import complete: ${result.stats.entitiesCreated} entities, ${result.stats.relationshipsCreated} relationships`,
processed: result.extraction.rows.length,
total: result.extraction.rows.length,
entities: result.stats.entitiesCreated,
relationships: result.stats.relationshipsCreated
})
} catch (error: any) {
result.errors.push(`Import failed: ${error.message}`)
result.success = false
}
return result
}
/**
* Import PDF file with full pipeline
*/
async importPDF(
buffer: Buffer,
options: SmartImportOptions & SmartPDFOptions = {},
onProgress?: (progress: SmartImportProgress) => void
): Promise<SmartImportResult> {
const startTime = Date.now()
const result: SmartImportResult = {
success: false,
// Typed boundary: populated after extraction (see importExcel).
extraction: null as unknown as SmartExcelResult,
entityIds: [],
relationshipIds: [],
stats: {
rowsProcessed: 0,
entitiesCreated: 0,
relationshipsCreated: 0,
filesCreated: 0,
totalTime: 0
},
errors: []
}
try {
// Phase 1: Extract from PDF
onProgress?.({ phase: 'extracting', message: 'Extracting from PDF...', processed: 0, total: 0, entities: 0, relationships: 0 })
const pdfResult = await this.pdfImporter.extract(buffer, options)
// Convert PDF result to Excel-like format for processing
result.extraction = this.convertPDFToExcelFormat(pdfResult)
result.stats.rowsProcessed = pdfResult.sectionsProcessed
// Phase 2 & 3: Create entities and relationships
await this.createEntitiesAndRelationships(result, options, onProgress)
// Phase 4: Create VFS structure
if (options.createVFSStructure !== false) {
const vfsOptions: VFSStructureOptions = {
rootPath: options.vfsRootPath || '/imports/' + (options.filename || 'import'),
groupBy: options.vfsGroupBy || 'type',
preserveSource: true,
sourceBuffer: buffer,
sourceFilename: options.filename || 'import.pdf',
createRelationshipFile: true,
createMetadataFile: true
}
const vfsResult = await this.vfsGenerator.generate(result.extraction, vfsOptions)
result.vfsStructure = { rootPath: vfsResult.rootPath, directories: vfsResult.directories, files: vfsResult.files.length }
result.stats.filesCreated = vfsResult.files.length
}
result.success = result.errors.length === 0
result.stats.totalTime = Date.now() - startTime
onProgress?.({ phase: 'complete', message: `Import complete: ${result.stats.entitiesCreated} entities, ${result.stats.relationshipsCreated} relationships`, processed: result.stats.rowsProcessed, total: result.stats.rowsProcessed, entities: result.stats.entitiesCreated, relationships: result.stats.relationshipsCreated })
} catch (error: any) {
result.errors.push(`PDF import failed: ${error.message}`)
result.success = false
}
return result
}
/**
* Import CSV file with full pipeline
*/
async importCSV(
buffer: Buffer,
options: SmartImportOptions & SmartCSVOptions = {},
onProgress?: (progress: SmartImportProgress) => void
): Promise<SmartImportResult> {
// CSV is very similar to Excel, can reuse importExcel logic
return this.importExcel(buffer, options, onProgress)
}
/**
* Import JSON data with full pipeline
*/
async importJSON(
data: any,
options: SmartImportOptions & SmartJSONOptions = {},
onProgress?: (progress: SmartImportProgress) => void
): Promise<SmartImportResult> {
const startTime = Date.now()
const result: SmartImportResult = {
success: false,
// Typed boundary: populated after extraction (see importExcel).
extraction: null as unknown as SmartExcelResult,
entityIds: [],
relationshipIds: [],
stats: {
rowsProcessed: 0,
entitiesCreated: 0,
relationshipsCreated: 0,
filesCreated: 0,
totalTime: 0
},
errors: []
}
try {
onProgress?.({ phase: 'extracting', message: 'Extracting from JSON...', processed: 0, total: 0, entities: 0, relationships: 0 })
const jsonResult = await this.jsonImporter.extract(data, options)
result.extraction = this.convertJSONToExcelFormat(jsonResult)
result.stats.rowsProcessed = jsonResult.nodesProcessed
await this.createEntitiesAndRelationships(result, options, onProgress)
if (options.createVFSStructure !== false) {
const sourceBuffer = Buffer.from(typeof data === 'string' ? data : JSON.stringify(data, null, 2))
const vfsOptions: VFSStructureOptions = {
rootPath: options.vfsRootPath || '/imports/' + (options.filename || 'import'),
groupBy: options.vfsGroupBy || 'type',
preserveSource: true,
sourceBuffer,
sourceFilename: options.filename || 'import.json',
createRelationshipFile: true,
createMetadataFile: true
}
const vfsResult = await this.vfsGenerator.generate(result.extraction, vfsOptions)
result.vfsStructure = { rootPath: vfsResult.rootPath, directories: vfsResult.directories, files: vfsResult.files.length }
result.stats.filesCreated = vfsResult.files.length
}
result.success = result.errors.length === 0
result.stats.totalTime = Date.now() - startTime
onProgress?.({ phase: 'complete', message: `Import complete: ${result.stats.entitiesCreated} entities, ${result.stats.relationshipsCreated} relationships`, processed: result.stats.rowsProcessed, total: result.stats.rowsProcessed, entities: result.stats.entitiesCreated, relationships: result.stats.relationshipsCreated })
} catch (error: any) {
result.errors.push(`JSON import failed: ${error.message}`)
result.success = false
}
return result
}
/**
* Import Markdown content with full pipeline
*/
async importMarkdown(
markdown: string,
options: SmartImportOptions & SmartMarkdownOptions = {},
onProgress?: (progress: SmartImportProgress) => void
): Promise<SmartImportResult> {
const startTime = Date.now()
const result: SmartImportResult = {
success: false,
// Typed boundary: populated after extraction (see importExcel).
extraction: null as unknown as SmartExcelResult,
entityIds: [],
relationshipIds: [],
stats: {
rowsProcessed: 0,
entitiesCreated: 0,
relationshipsCreated: 0,
filesCreated: 0,
totalTime: 0
},
errors: []
}
try {
onProgress?.({ phase: 'extracting', message: 'Extracting from Markdown...', processed: 0, total: 0, entities: 0, relationships: 0 })
const mdResult = await this.markdownImporter.extract(markdown, options)
result.extraction = this.convertMarkdownToExcelFormat(mdResult)
result.stats.rowsProcessed = mdResult.sectionsProcessed
await this.createEntitiesAndRelationships(result, options, onProgress)
if (options.createVFSStructure !== false) {
const sourceBuffer = Buffer.from(markdown, 'utf-8')
const vfsOptions: VFSStructureOptions = {
rootPath: options.vfsRootPath || '/imports/' + (options.filename || 'import'),
groupBy: options.vfsGroupBy || 'type',
preserveSource: true,
sourceBuffer,
sourceFilename: options.filename || 'import.md',
createRelationshipFile: true,
createMetadataFile: true
}
const vfsResult = await this.vfsGenerator.generate(result.extraction, vfsOptions)
result.vfsStructure = { rootPath: vfsResult.rootPath, directories: vfsResult.directories, files: vfsResult.files.length }
result.stats.filesCreated = vfsResult.files.length
}
result.success = result.errors.length === 0
result.stats.totalTime = Date.now() - startTime
onProgress?.({ phase: 'complete', message: `Import complete: ${result.stats.entitiesCreated} entities, ${result.stats.relationshipsCreated} relationships`, processed: result.stats.rowsProcessed, total: result.stats.rowsProcessed, entities: result.stats.entitiesCreated, relationships: result.stats.relationshipsCreated })
} catch (error: any) {
result.errors.push(`Markdown import failed: ${error.message}`)
result.success = false
}
return result
}
/**
* Helper: Create entities and relationships from extraction result
*/
private async createEntitiesAndRelationships(
result: SmartImportResult,
options: SmartImportOptions,
onProgress?: (progress: SmartImportProgress) => void
): Promise<void> {
if (options.createEntities !== false) {
onProgress?.({ phase: 'creating', message: 'Creating entities in knowledge graph...', processed: 0, total: result.extraction.rows.length, entities: 0, relationships: 0 })
for (let i = 0; i < result.extraction.rows.length; i++) {
const extracted = result.extraction.rows[i]
try {
// Subtype precedence: extractor → caller default → `'imported'` (7.30.1).
const entityId = await this.brain.add({
data: extracted.entity.description,
type: extracted.entity.type,
subtype:
(extracted.entity as typeof extracted.entity & { subtype?: string })
.subtype ?? options.defaultSubtype ?? 'imported',
confidence: extracted.entity.confidence, // reserved field — dedicated param, not metadata
metadata: { ...splitNounMetadataRecord(extracted.entity.metadata).custom, name: extracted.entity.name, importedFrom: 'smart-import' }
})
result.entityIds.push(entityId)
result.stats.entitiesCreated++
extracted.entity.id = entityId
} catch (error: any) {
result.errors.push(`Failed to create entity ${extracted.entity.name}: ${error.message}`)
}
}
}
if (options.createRelationships !== false && options.createEntities !== false) {
onProgress?.({ phase: 'creating', message: 'Preparing relationships...', processed: 0, total: result.extraction.rows.length, entities: result.entityIds.length, relationships: 0 })
// Collect all relationship parameters
const relationshipParams: Array<{from: string; to: string; type: VerbType; subtype?: string; confidence?: number; metadata?: any}> = []
for (const extracted of result.extraction.rows) {
for (const rel of extracted.relationships) {
try {
let toEntityId: string | undefined
for (const otherExtracted of result.extraction.rows) {
if (rel.to.toLowerCase().includes(otherExtracted.entity.name.toLowerCase()) || otherExtracted.entity.name.toLowerCase().includes(rel.to.toLowerCase())) {
toEntityId = otherExtracted.entity.id
break
}
}
if (!toEntityId) {
// Subtype `import-placeholder` marks synthetic targets (7.30.1).
toEntityId = await this.brain.add({ data: rel.to, type: NounType.Thing, subtype: 'import-placeholder', metadata: { name: rel.to, placeholder: true, extractedFrom: extracted.entity.name } })
result.entityIds.push(toEntityId)
}
// Relationship subtype precedence: extractor → caller default → `'imported'` (7.30.1).
// `confidence` is a reserved top-level field — dedicated relate() param, not metadata
relationshipParams.push({ from: extracted.entity.id, to: toEntityId, type: rel.type, subtype: (rel as typeof rel & { subtype?: string }).subtype ?? options.defaultSubtype ?? 'imported', confidence: rel.confidence, metadata: { evidence: rel.evidence } })
} catch (error: any) {
result.errors.push(`Failed to prepare relationship: ${error.message}`)
}
}
}
// Batch create all relationships with progress
if (relationshipParams.length > 0) {
onProgress?.({ phase: 'relationships', message: 'Building relationships...', processed: 0, total: relationshipParams.length, entities: result.entityIds.length, relationships: 0 })
try {
const relationshipIds = await this.brain.relateMany({
items: relationshipParams,
parallel: true,
chunkSize: 100,
continueOnError: true,
onProgress: (done, total) => {
onProgress?.({ phase: 'relationships', message: `Building relationships: ${done}/${total}`, processed: done, total: total, entities: result.entityIds.length, relationships: done })
}
})
result.relationshipIds = relationshipIds
result.stats.relationshipsCreated = relationshipIds.length
} catch (error: any) {
result.errors.push(`Failed to create relationships: ${error.message}`)
}
}
}
}
/**
* Helper: Convert PDF result to Excel-like format
*/
private convertPDFToExcelFormat(pdfResult: SmartPDFResult): Omit<SmartExcelResult, 'rows'> & { rows: any[] } {
const rows = pdfResult.sections.flatMap(section =>
section.entities.map(entity => ({
entity,
relatedEntities: [],
relationships: section.relationships.filter(r => r.from === entity.id),
concepts: section.concepts
}))
)
return {
rowsProcessed: pdfResult.sectionsProcessed,
entitiesExtracted: pdfResult.entitiesExtracted,
relationshipsInferred: pdfResult.relationshipsInferred,
rows,
entityMap: pdfResult.entityMap,
processingTime: pdfResult.processingTime,
stats: pdfResult.stats
}
}
/**
* Helper: Convert JSON result to Excel-like format
*/
private convertJSONToExcelFormat(jsonResult: SmartJSONResult): Omit<SmartExcelResult, 'rows'> & { rows: any[] } {
const rows = jsonResult.entities.map(entity => ({
entity,
relatedEntities: [],
relationships: jsonResult.relationships.filter(r => r.from === entity.id),
concepts: entity.metadata.concepts || []
}))
return {
rowsProcessed: jsonResult.nodesProcessed,
entitiesExtracted: jsonResult.entitiesExtracted,
relationshipsInferred: jsonResult.relationshipsInferred,
rows,
entityMap: jsonResult.entityMap,
processingTime: jsonResult.processingTime,
stats: jsonResult.stats
}
}
/**
* Helper: Convert Markdown result to Excel-like format
*/
private convertMarkdownToExcelFormat(mdResult: SmartMarkdownResult): Omit<SmartExcelResult, 'rows'> & { rows: any[] } {
const rows = mdResult.sections.flatMap(section =>
section.entities.map(entity => ({
entity,
relatedEntities: [],
relationships: section.relationships.filter(r => r.from === entity.id),
concepts: section.concepts
}))
)
return {
rowsProcessed: mdResult.sectionsProcessed,
entitiesExtracted: mdResult.entitiesExtracted,
relationshipsInferred: mdResult.relationshipsInferred,
rows,
entityMap: mdResult.entityMap,
processingTime: mdResult.processingTime,
stats: mdResult.stats
}
}
/**
* Get import statistics
*/
async getImportStatistics(vfsRootPath: string): Promise<{
entitiesInGraph: number
relationshipsInGraph: number
filesInVFS: number
lastImport?: Date
}> {
// Read metadata file
const vfs = new VirtualFileSystem(this.brain)
await vfs.init()
const metadataPath = `${vfsRootPath}/_metadata.json`
try {
const metadataBuffer = await vfs.readFile(metadataPath)
const metadata = JSON.parse(metadataBuffer.toString('utf-8'))
return {
entitiesInGraph: metadata.import.stats.entitiesExtracted,
relationshipsInGraph: metadata.import.stats.relationshipsInferred,
filesInVFS: metadata.structure.fileCount,
lastImport: new Date(metadata.import.timestamp)
}
} catch (error) {
return {
entitiesInGraph: 0,
relationshipsInGraph: 0,
filesInVFS: 0
}
}
}
}

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@ -1,69 +0,0 @@
/**
* Smart Import System
*
* Production-ready entity and relationship extraction from multiple formats:
* - Excel (.xlsx)
* - PDF (.pdf)
* - CSV (.csv)
* - JSON (.json)
* - Markdown (.md)
*
* Uses brainy's built-in NeuralEntityExtractor and NaturalLanguageProcessor
*
* NO MOCKS - Real working implementation
*/
// Excel Importer
export { SmartExcelImporter } from './SmartExcelImporter.js'
export type {
SmartExcelOptions,
ExtractedRow,
SmartExcelResult
} from './SmartExcelImporter.js'
// PDF Importer
export { SmartPDFImporter } from './SmartPDFImporter.js'
export type {
SmartPDFOptions,
ExtractedSection,
SmartPDFResult
} from './SmartPDFImporter.js'
// CSV Importer
export { SmartCSVImporter } from './SmartCSVImporter.js'
export type {
SmartCSVOptions,
SmartCSVResult
} from './SmartCSVImporter.js'
// JSON Importer
export { SmartJSONImporter } from './SmartJSONImporter.js'
export type {
SmartJSONOptions,
ExtractedJSONEntity,
ExtractedJSONRelationship,
SmartJSONResult
} from './SmartJSONImporter.js'
// Markdown Importer
export { SmartMarkdownImporter } from './SmartMarkdownImporter.js'
export type {
SmartMarkdownOptions,
MarkdownSection,
SmartMarkdownResult
} from './SmartMarkdownImporter.js'
// VFS Structure Generator
export { VFSStructureGenerator } from './VFSStructureGenerator.js'
export type {
VFSStructureOptions,
VFSStructureResult
} from './VFSStructureGenerator.js'
// Orchestrator (Main entry point)
export { SmartImportOrchestrator } from './SmartImportOrchestrator.js'
export type {
SmartImportOptions,
SmartImportProgress,
SmartImportResult
} from './SmartImportOrchestrator.js'

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/**
* @module columnStore
* @description Unified column store for filtering, sorting, range queries,
* and text search on any field type with exact precision at billion scale.
*
* Replaces MetadataIndex's sparse chunk/bloom filter/bucketing internals
* with per-field sorted columns. Design lineage: Lucene doc values + roaring
* bitmap acceleration.
*/
export { ColumnStore } from './ColumnStore.js'
export type { ColumnStoreConfig } from './ColumnStore.js'
export { ColumnTailBuffer } from './ColumnTailBuffer.js'
export { ColumnManifest } from './ColumnManifest.js'
export { ColumnSegmentCursor, TailBufferCursor } from './ColumnSegmentCursor.js'
export {
writeSegmentToBuffer,
readSegmentFromBuffer,
writeHeader,
readHeader,
crc32
} from './ColumnSegmentFormat.js'
export {
ValueType,
CIDX_MAGIC,
CIDX_VERSION,
HEADER_SIZE,
FOOTER_SIZE,
DEFAULT_FLUSH_THRESHOLD,
FLAG_MULTI_VALUE
} from './types.js'
export type {
ColumnStoreProvider,
SegmentHeader,
SegmentFooter,
SegmentMeta,
ManifestData
} from './types.js'

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/**
* BrainyMCPBroadcast
*
* Enhanced MCP service with real-time WebSocket broadcasting capabilities
* for multi-agent coordination (Jarvis Picasso communication)
*
* Features:
* - WebSocket server for real-time push notifications
* - Subscription management for multiple Claude instances
* - Message broadcasting to all connected agents
* - Works both locally and with cloud deployment
*/
import { WebSocketServer, WebSocket } from 'ws'
import { createServer, IncomingMessage } from 'node:http'
import { BrainyMCPService } from './brainyMCPService.js'
import { BrainyInterface } from '../types/brainyInterface.js'
import { MCPServiceOptions } from '../types/mcpTypes.js'
import { v4 as uuidv4 } from '../universal/uuid.js'
interface BroadcastMessage {
id: string
from: string
to?: string | string[]
type: 'message' | 'notification' | 'sync' | 'heartbeat' | 'identify'
event?: string
data: any
timestamp: number
}
interface ConnectedAgent {
id: string
name: string
role: string
socket: WebSocket
lastSeen: number
}
export class BrainyMCPBroadcast extends BrainyMCPService {
private wsServer?: WebSocketServer
private httpServer?: any
private agents: Map<string, ConnectedAgent> = new Map()
private messageHistory: BroadcastMessage[] = []
private maxHistorySize = 100
constructor(
brainyData: BrainyInterface,
options: MCPServiceOptions & {
broadcastPort?: number
cloudUrl?: string
} = {}
) {
super(brainyData, options)
}
/**
* Start the WebSocket broadcast server
* @param port Port to listen on (default: 8765)
* @param isCloud Whether this is a cloud deployment
*/
async startBroadcastServer(port = 8765, isCloud = false): Promise<void> {
return new Promise((resolve, reject) => {
try {
// Create HTTP server
this.httpServer = createServer((req, res) => {
// Health check endpoint
if (req.url === '/health') {
res.writeHead(200, { 'Content-Type': 'application/json' })
res.end(JSON.stringify({
status: 'healthy',
agents: Array.from(this.agents.values()).map(a => ({
id: a.id,
name: a.name,
role: a.role,
connected: true
})),
uptime: process.uptime()
}))
} else {
res.writeHead(404)
res.end('Not found')
}
})
// Create WebSocket server
this.wsServer = new WebSocketServer({
server: this.httpServer,
perMessageDeflate: false // Better performance
})
this.wsServer.on('connection', (socket, request) => {
this.handleNewConnection(socket, request)
})
// Start listening
this.httpServer.listen(port, () => {
console.log(`🧠 Brain Jar Broadcast Server running on ${isCloud ? 'cloud' : 'local'} port ${port}`)
console.log(`📡 WebSocket: ws://localhost:${port}`)
console.log(`🔍 Health: http://localhost:${port}/health`)
resolve()
})
// Heartbeat to keep connections alive
setInterval(() => {
this.agents.forEach((agent) => {
if (Date.now() - agent.lastSeen > 30000) {
// Remove inactive agents
this.removeAgent(agent.id)
} else {
// Send heartbeat
this.sendToAgent(agent.id, {
id: uuidv4(),
from: 'server',
type: 'heartbeat',
data: { timestamp: Date.now() },
timestamp: Date.now()
})
}
})
}, 15000)
} catch (error) {
reject(error)
}
})
}
/**
* Handle new WebSocket connection
*/
private handleNewConnection(socket: WebSocket, request: IncomingMessage) {
const agentId = uuidv4()
// Send welcome message
socket.send(JSON.stringify({
id: uuidv4(),
from: 'server',
type: 'notification',
event: 'welcome',
data: {
agentId,
message: 'Connected to Brain Jar Broadcast Server',
agents: Array.from(this.agents.values()).map(a => ({
id: a.id,
name: a.name,
role: a.role
}))
},
timestamp: Date.now()
}))
// Handle messages from this agent
socket.on('message', (data) => {
try {
const message = JSON.parse(data.toString())
this.handleAgentMessage(agentId, message)
} catch (error) {
console.error('Invalid message from agent:', error)
}
})
// Handle disconnection
socket.on('close', () => {
this.removeAgent(agentId)
})
// Handle errors
socket.on('error', (error) => {
console.error(`Agent ${agentId} error:`, error)
})
// Store temporary connection until identified
this.agents.set(agentId, {
id: agentId,
name: 'Unknown',
role: 'Unknown',
socket,
lastSeen: Date.now()
})
}
/**
* Handle message from an agent
*/
private handleAgentMessage(agentId: string, message: any) {
const agent = this.agents.get(agentId)
if (!agent) return
// Update last seen
agent.lastSeen = Date.now()
// Handle identification
if (message.type === 'identify') {
agent.name = message.name || agent.name
agent.role = message.role || agent.role
// Notify all agents about new member
this.broadcast({
id: uuidv4(),
from: 'server',
type: 'notification',
event: 'agent_joined',
data: {
agent: {
id: agent.id,
name: agent.name,
role: agent.role
}
},
timestamp: Date.now()
}, agentId) // Exclude the joining agent
// Send recent history to new agent
if (this.messageHistory.length > 0) {
this.sendToAgent(agentId, {
id: uuidv4(),
from: 'server',
type: 'sync',
data: {
history: this.messageHistory.slice(-20) // Last 20 messages
},
timestamp: Date.now()
})
}
return
}
// Create broadcast message
const broadcastMsg: BroadcastMessage = {
id: message.id || uuidv4(),
from: agent.name,
to: message.to,
type: message.type || 'message',
event: message.event,
data: message.data,
timestamp: Date.now()
}
// Store in history
this.addToHistory(broadcastMsg)
// Broadcast based on recipient
if (message.to) {
// Send to specific agent(s)
const recipients = Array.isArray(message.to) ? message.to : [message.to]
recipients.forEach((recipientName: string) => {
const recipient = Array.from(this.agents.values()).find(
a => a.name === recipientName
)
if (recipient) {
this.sendToAgent(recipient.id, broadcastMsg)
}
})
} else {
// Broadcast to all agents except sender
this.broadcast(broadcastMsg, agentId)
}
}
/**
* Broadcast message to all connected agents
*/
broadcast(message: BroadcastMessage, excludeId?: string) {
const messageStr = JSON.stringify(message)
this.agents.forEach((agent) => {
if (agent.id !== excludeId && agent.socket.readyState === WebSocket.OPEN) {
agent.socket.send(messageStr)
}
})
}
/**
* Send message to specific agent
*/
private sendToAgent(agentId: string, message: BroadcastMessage) {
const agent = this.agents.get(agentId)
if (agent && agent.socket.readyState === WebSocket.OPEN) {
agent.socket.send(JSON.stringify(message))
}
}
/**
* Remove agent from connected list
*/
private removeAgent(agentId: string) {
const agent = this.agents.get(agentId)
if (agent) {
// Notify others about disconnection
this.broadcast({
id: uuidv4(),
from: 'server',
type: 'notification',
event: 'agent_left',
data: {
agent: {
id: agent.id,
name: agent.name,
role: agent.role
}
},
timestamp: Date.now()
})
this.agents.delete(agentId)
}
}
/**
* Add message to history
*/
private addToHistory(message: BroadcastMessage) {
this.messageHistory.push(message)
// Trim history if too large
if (this.messageHistory.length > this.maxHistorySize) {
this.messageHistory = this.messageHistory.slice(-this.maxHistorySize)
}
}
/**
* Stop the broadcast server
*/
async stopBroadcastServer(): Promise<void> {
// Close all agent connections
this.agents.forEach(agent => {
agent.socket.close(1000, 'Server shutting down')
})
this.agents.clear()
// Close WebSocket server
if (this.wsServer) {
this.wsServer.close()
}
// Close HTTP server
if (this.httpServer) {
this.httpServer.close()
}
}
/**
* Get connected agents
*/
getConnectedAgents(): Array<{ id: string; name: string; role: string }> {
return Array.from(this.agents.values()).map(a => ({
id: a.id,
name: a.name,
role: a.role
}))
}
/**
* Get message history
*/
getMessageHistory(): BroadcastMessage[] {
return [...this.messageHistory]
}
}
// Export for both environments
export default BrainyMCPBroadcast

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/**
* BrainyMCPClient
*
* Client for connecting Claude instances to the Brain Jar Broadcast Server
* Utilizes Brainy for persistent memory and vector search capabilities
*/
import WebSocket from 'ws'
import { Brainy } from '../brainy.js'
import { NounType } from '../types/graphTypes.js'
import { v4 as uuidv4 } from '../universal/uuid.js'
interface ClientOptions {
name: string // e.g., 'Jarvis' or 'Picasso'
role: string // e.g., 'Backend Systems' or 'Frontend Design'
serverUrl?: string // Default: ws://localhost:8765
autoReconnect?: boolean
useBrainyMemory?: boolean // Store messages in Brainy for persistence
}
interface Message {
id: string
from: string
to?: string | string[]
type: 'message' | 'notification' | 'sync' | 'heartbeat' | 'identify'
event?: string
data: any
timestamp: number
}
export class BrainyMCPClient {
private socket?: WebSocket
private options: Required<ClientOptions>
private brainy?: Brainy
private messageHandlers: Map<string, (message: Message) => void> = new Map()
private reconnectTimeout?: NodeJS.Timeout
private isConnected = false
constructor(options: ClientOptions) {
this.options = {
serverUrl: 'ws://localhost:8765',
autoReconnect: true,
useBrainyMemory: true,
...options
}
}
/**
* Initialize Brainy for persistent memory
*/
private async initBrainy() {
if (this.options.useBrainyMemory && !this.brainy) {
this.brainy = new Brainy({
storage: {
requestPersistentStorage: true
}
})
await this.brainy.init()
console.log(`🧠 Brainy memory initialized for ${this.options.name}`)
}
}
/**
* Connect to the broadcast server
*/
async connect(): Promise<void> {
// Initialize Brainy first
await this.initBrainy()
return new Promise((resolve, reject) => {
try {
this.socket = new WebSocket(this.options.serverUrl)
this.socket.on('open', () => {
console.log(`${this.options.name} connected to Brain Jar Broadcast`)
this.isConnected = true
// Identify ourselves
this.send({
type: 'identify',
data: {
name: this.options.name,
role: this.options.role
}
})
resolve()
})
this.socket.on('message', async (data) => {
try {
const message = JSON.parse(data.toString()) as Message
await this.handleMessage(message)
} catch (error) {
console.error('Error parsing message:', error)
}
})
this.socket.on('close', () => {
console.log(`${this.options.name} disconnected from Brain Jar`)
this.isConnected = false
if (this.options.autoReconnect) {
this.scheduleReconnect()
}
})
this.socket.on('error', (error) => {
console.error(`Connection error for ${this.options.name}:`, error)
reject(error)
})
} catch (error) {
reject(error)
}
})
}
/**
* Handle incoming message
*/
private async handleMessage(message: Message) {
// Store in Brainy for persistent memory. Subtype `'mcp-message'` marks
// these as MCP-protocol messages so consumers can filter / count them via
// `find({ type: NounType.Message, subtype: 'mcp-message' })` and so
// enforcement consumers registering a vocabulary on NounType.Message don't
// reject MCP traffic (added 7.30.1; also fixes the pre-existing missing
// `data` field by aliasing from the prior `text` field).
if (this.brainy && message.type === 'message') {
try {
await this.brainy.add({
data: `${message.from}: ${JSON.stringify(message.data)}`,
type: NounType.Message,
subtype: 'mcp-message',
metadata: {
messageId: message.id,
from: message.from,
to: message.to,
timestamp: message.timestamp,
messageType: message.type,
event: message.event
}
})
} catch (error) {
console.error('Error storing message in Brainy:', error)
}
}
// Handle sync messages (receive history)
if (message.type === 'sync' && message.data.history) {
console.log(`📜 ${this.options.name} received ${message.data.history.length} historical messages`)
// Store history in Brainy with the same subtype as live messages.
if (this.brainy) {
for (const histMsg of message.data.history) {
await this.brainy.add({
data: `${histMsg.from}: ${JSON.stringify(histMsg.data)}`,
type: NounType.Message,
subtype: 'mcp-message',
metadata: {
...histMsg
}
})
}
}
}
// Call registered handlers
const handler = this.messageHandlers.get(message.type)
if (handler) {
handler(message)
}
// Call universal handler
const universalHandler = this.messageHandlers.get('*')
if (universalHandler) {
universalHandler(message)
}
}
/**
* Send a message
*/
send(message: Partial<Message>) {
if (!this.socket || this.socket.readyState !== WebSocket.OPEN) {
console.error(`${this.options.name} is not connected`)
return
}
const fullMessage: Message = {
id: message.id || uuidv4(),
from: this.options.name,
type: message.type || 'message',
data: message.data || {},
timestamp: Date.now(),
...message
}
this.socket.send(JSON.stringify(fullMessage))
}
/**
* Send a message to specific agent(s)
*/
sendTo(recipient: string | string[], data: any) {
this.send({
to: recipient,
type: 'message',
data
})
}
/**
* Broadcast to all agents
*/
broadcast(data: any) {
this.send({
type: 'message',
data
})
}
/**
* Register a message handler
*/
on(type: string, handler: (message: Message) => void) {
this.messageHandlers.set(type, handler)
}
/**
* Remove a message handler
*/
off(type: string) {
this.messageHandlers.delete(type)
}
/**
* Search historical messages using Brainy's vector search
*/
async searchMemory(query: string, limit = 10): Promise<any[]> {
if (!this.brainy) {
console.warn('Brainy memory not initialized')
return []
}
const results = await this.brainy.find({ query, limit })
return results.map(r => ({
...r.metadata,
relevance: r.score
}))
}
/**
* Get recent messages from Brainy memory
*/
async getRecentMessages(limit = 20): Promise<any[]> {
if (!this.brainy) {
console.warn('Brainy memory not initialized')
return []
}
// Search for recent activity
const results = await this.brainy.find({ query: 'recent messages communication', limit })
return results
.map(r => r.metadata)
.sort((a: any, b: any) => b.timestamp - a.timestamp)
}
/**
* Schedule reconnection attempt
*/
private scheduleReconnect() {
if (this.reconnectTimeout) {
clearTimeout(this.reconnectTimeout)
}
this.reconnectTimeout = setTimeout(() => {
console.log(`🔄 ${this.options.name} attempting to reconnect...`)
this.connect().catch(error => {
console.error('Reconnection failed:', error)
this.scheduleReconnect()
})
}, 5000)
}
/**
* Disconnect from server
*/
disconnect() {
if (this.reconnectTimeout) {
clearTimeout(this.reconnectTimeout)
}
if (this.socket) {
this.socket.close(1000, 'Client disconnecting')
this.socket = undefined
}
this.isConnected = false
}
/**
* Check if connected
*/
getIsConnected(): boolean {
return this.isConnected
}
/**
* Get agent info
*/
getAgentInfo() {
return {
name: this.options.name,
role: this.options.role,
connected: this.isConnected
}
}
}
// Export for both environments
export default BrainyMCPClient

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@ -1,200 +0,0 @@
/**
* 🧠 Natural Language Query Processor - STATIC VERSION
* No runtime initialization, no memory leaks, patterns pre-built at compile time
*
* Uses static pattern matching with 220 pre-built patterns
*/
import { Vector } from '../coreTypes.js'
import { TripleQuery } from '../triple/TripleIntelligence.js'
import { patternMatchQuery, PATTERN_STATS } from './staticPatternMatcher.js'
export interface NaturalQueryIntent {
type: 'vector' | 'field' | 'graph' | 'combined'
confidence: number
extractedTerms: {
entities?: string[]
fields?: string[]
relationships?: string[]
modifiers?: string[]
}
}
export class NaturalLanguageProcessor {
private queryHistory: Array<{ query: string; result: TripleQuery; success: boolean }>
constructor() {
this.queryHistory = []
// Patterns are static - no initialization needed!
}
/**
* No initialization needed - patterns are pre-built!
*/
async init(): Promise<void> {
// Nothing to do - patterns are compiled into the code
return Promise.resolve()
}
/**
* Process natural language query into structured Triple Intelligence query
* @param naturalQuery The natural language query string
* @param queryEmbedding Pre-computed embedding from Brainy (passed in to avoid circular dependency)
*/
async processNaturalQuery(naturalQuery: string, queryEmbedding?: Vector): Promise<TripleQuery> {
// Use static pattern matcher (no async, no memory allocation!)
const structuredQuery = patternMatchQuery(naturalQuery, queryEmbedding)
// Step 3: Enhance with intent analysis if needed
if (!structuredQuery.where && !structuredQuery.connected) {
const intent = await this.analyzeIntent(naturalQuery)
// Add metadata based on intent
if (intent.type === 'field' && intent.extractedTerms.fields) {
structuredQuery.where = this.buildFieldConstraints(intent.extractedTerms.fields)
}
}
// Track for learning (but don't create new Brainy!)
this.queryHistory.push({
query: naturalQuery,
result: structuredQuery,
success: false // Will be updated based on user interaction
})
// Keep history limited to prevent memory growth
if (this.queryHistory.length > 100) {
this.queryHistory.shift()
}
return structuredQuery
}
/**
* Analyze query intent using keywords
*/
private async analyzeIntent(query: string): Promise<NaturalQueryIntent> {
const lowerQuery = query.toLowerCase()
// Check for field-specific keywords
const fieldKeywords = ['where', 'filter', 'with', 'has', 'contains', 'equals', 'greater', 'less', 'between']
const hasFieldIntent = fieldKeywords.some(kw => lowerQuery.includes(kw))
// Check for graph keywords
const graphKeywords = ['related', 'connected', 'linked', 'associated', 'references']
const hasGraphIntent = graphKeywords.some(kw => lowerQuery.includes(kw))
// Determine type
let type: NaturalQueryIntent['type'] = 'vector'
if (hasFieldIntent && hasGraphIntent) {
type = 'combined'
} else if (hasFieldIntent) {
type = 'field'
} else if (hasGraphIntent) {
type = 'graph'
}
return {
type,
confidence: 0.8,
extractedTerms: {
fields: hasFieldIntent ? this.extractFieldTerms(query) : undefined,
relationships: hasGraphIntent ? this.extractRelationshipTerms(query) : undefined
}
}
}
/**
* Extract field terms from query
*/
private extractFieldTerms(query: string): string[] {
const terms: string[] = []
// Simple extraction of potential field names
const words = query.split(/\s+/)
const fieldIndicators = ['year', 'date', 'author', 'type', 'category', 'status', 'price']
for (const word of words) {
if (fieldIndicators.includes(word.toLowerCase())) {
terms.push(word.toLowerCase())
}
}
return terms
}
/**
* Extract relationship terms
*/
private extractRelationshipTerms(query: string): string[] {
const terms: string[] = []
const relationshipWords = ['related', 'connected', 'linked', 'references', 'cites']
const words = query.toLowerCase().split(/\s+/)
for (const word of words) {
if (relationshipWords.includes(word)) {
terms.push(word)
}
}
return terms
}
/**
* Build field constraints from extracted terms
*/
private buildFieldConstraints(fields: string[]): Record<string, any> {
const constraints: Record<string, any> = {}
// Simple mapping for common fields
for (const field of fields) {
// This would be enhanced with actual value extraction
constraints[field] = { exists: true }
}
return constraints
}
/**
* Find similar queries from history (without using Brainy)
* NOTE: Currently unused - reserved for future query caching optimization
*/
private findSimilarQueries(embedding: Vector): Array<{
query: string
result: TripleQuery
similarity: number
}> {
// Not implemented - not required for core functionality
// Would implement cosine similarity against queryHistory if needed
return []
}
/**
* Adapt a previous query for new input
*/
private adaptQuery(newQuery: string, previousResult: TripleQuery): TripleQuery {
return previousResult
}
/**
* Extract entities from query
*/
private async extractEntities(query: string): Promise<string[]> {
// Could use the Entity Registry here if available
return []
}
/**
* Build query from components
*/
private buildQuery(
query: string,
intent: NaturalQueryIntent,
entities: string[]
): TripleQuery {
return {
like: query,
limit: 10
}
}
}

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@ -1,633 +0,0 @@
/**
* Neural Import - AI-Powered Data Understanding
*
* Standalone implementation for intelligent data processing.
*/
import { NounType, VerbType } from '../types/graphTypes.js'
import * as fs from '../universal/fs.js'
import * as path from '../universal/path.js'
import { prodLog } from '../utils/logger.js'
// Neural Import Analysis Types
export interface NeuralAnalysisResult {
detectedEntities: DetectedEntity[]
detectedRelationships: DetectedRelationship[]
confidence: number
insights: NeuralInsight[]
}
export interface DetectedEntity {
originalData: any
nounType: string
confidence: number
suggestedId: string
reasoning: string
alternativeTypes: Array<{ type: string, confidence: number }>
}
export interface DetectedRelationship {
sourceId: string
targetId: string
verbType: string
confidence: number
weight: number
reasoning: string
context: string
metadata?: Record<string, any>
}
export interface NeuralInsight {
type: 'hierarchy' | 'cluster' | 'pattern' | 'anomaly' | 'opportunity'
description: string
confidence: number
affectedEntities: string[]
recommendation?: string
}
export interface NeuralImportConfig {
confidenceThreshold: number
enableWeights: boolean
skipDuplicates: boolean
categoryFilter?: string[]
dataType?: string
}
/**
* Neural Import Augmentation - Unified Implementation
* Processes data with AI before storage operations
*/
export class NeuralImportAugmentation {
readonly name = 'neural-import'
private operations = ['add', 'addNoun', 'addVerb', 'all']
protected config: NeuralImportConfig
private analysisCache = new Map<string, NeuralAnalysisResult>()
private context?: { brain: any }
constructor(config: Partial<NeuralImportConfig> = {}) {
this.config = {
confidenceThreshold: 0.7,
enableWeights: true,
skipDuplicates: true,
dataType: 'json',
...config
}
}
async init(): Promise<void> {
// No external dependencies to initialize
}
private log(message: string, _level?: string): void {
// Silent by default
}
/**
* Execute augmentation - process data with AI before storage
*/
async execute<T = any>(
operation: string,
params: any,
next: () => Promise<T>
): Promise<T> {
// Only process on add operations
if (!this.operations.includes(operation)) {
return next()
}
try {
// Extract data from params based on operation
const rawData = this.extractRawData(operation, params)
if (!rawData) {
return next()
}
// Perform neural analysis
const analysis = await this.performNeuralAnalysis(rawData, this.config)
// Enhance params with neural insights
if (params.metadata) {
params.metadata._neuralProcessed = true
params.metadata._neuralConfidence = analysis.confidence
params.metadata._detectedEntities = analysis.detectedEntities.length
params.metadata._detectedRelationships = analysis.detectedRelationships.length
params.metadata._neuralInsights = analysis.insights
} else if (typeof params === 'object') {
params.metadata = {
_neuralProcessed: true,
_neuralConfidence: analysis.confidence,
_detectedEntities: analysis.detectedEntities.length,
_detectedRelationships: analysis.detectedRelationships.length,
_neuralInsights: analysis.insights
}
}
// Store neural analysis for later retrieval
await this.storeNeuralAnalysis(analysis)
// If we detected entities/relationships, potentially add them
if (this.context?.brain && analysis.detectedEntities.length > 0) {
// This could automatically create entities/relationships
// But for now, just enhance the metadata
this.log(`Detected ${analysis.detectedEntities.length} entities and ${analysis.detectedRelationships.length} relationships`)
}
// Continue with enhanced data
return next()
} catch (error) {
this.log(`Neural analysis failed: ${error}`, 'warn')
// Continue without neural processing
return next()
}
}
/**
* Extract raw data from operation params
*/
private extractRawData(operation: string, params: any): any {
switch (operation) {
case 'add':
return params.content || params.data || params
case 'addNoun':
return params.noun || params.data || params
case 'addVerb':
return params.verb || params
case 'addBatch':
return params.items || params.batch || params
default:
return null
}
}
/**
* Get the full neural analysis result (for external use)
*/
async getNeuralAnalysis(rawData: Buffer | string, dataType?: string): Promise<NeuralAnalysisResult> {
const parsedData = await this.parseRawData(rawData, dataType || this.config.dataType || 'json')
return await this.performNeuralAnalysis(parsedData, this.config)
}
/**
* Parse raw data based on type
*/
private async parseRawData(rawData: Buffer | string, dataType: string): Promise<any[]> {
const content = typeof rawData === 'string' ? rawData : rawData.toString('utf8')
switch (dataType.toLowerCase()) {
case 'json':
try {
const jsonData = JSON.parse(content)
return Array.isArray(jsonData) ? jsonData : [jsonData]
} catch {
// If JSON parse fails, treat as text
return [{ text: content }]
}
case 'csv':
return this.parseCSV(content)
case 'yaml':
case 'yml':
return this.parseYAML(content)
case 'txt':
case 'text':
// Split text into sentences/paragraphs for analysis
return content.split(/\n+/).filter(line => line.trim()).map(line => ({ text: line }))
default:
// Unknown type, treat as text
return [{ text: content }]
}
}
/**
* Parse CSV data - handles quoted values, escaped quotes, and edge cases
*/
private parseCSV(content: string): any[] {
const lines = content.split('\n')
if (lines.length === 0) return []
// Parse a CSV line handling quotes
const parseLine = (line: string): string[] => {
const result: string[] = []
let current = ''
let inQuotes = false
let i = 0
while (i < line.length) {
const char = line[i]
const nextChar = line[i + 1]
if (char === '"') {
if (inQuotes && nextChar === '"') {
// Escaped quote
current += '"'
i += 2
} else {
// Toggle quote mode
inQuotes = !inQuotes
i++
}
} else if (char === ',' && !inQuotes) {
// Field separator
result.push(current.trim())
current = ''
i++
} else {
current += char
i++
}
}
// Add last field
result.push(current.trim())
return result
}
// Parse headers
const headers = parseLine(lines[0])
const data = []
// Parse data rows
for (let i = 1; i < lines.length; i++) {
const line = lines[i].trim()
if (!line) continue // Skip empty lines
const values = parseLine(line)
const row: any = {}
headers.forEach((header, index) => {
const value = values[index] || ''
// Try to parse numbers
const num = Number(value)
row[header] = !isNaN(num) && value !== '' ? num : value
})
data.push(row)
}
return data
}
/**
* Parse YAML data
*/
private parseYAML(content: string): any[] {
try {
// Simple YAML parser for basic structures
// For full YAML support, we'd use js-yaml library
const lines = content.split('\n')
const result: any[] = []
let currentObject: any = null
let currentIndent = 0
for (const line of lines) {
const trimmed = line.trim()
if (!trimmed || trimmed.startsWith('#')) continue // Skip empty lines and comments
// Calculate indentation
const indent = line.length - line.trimStart().length
// Check for array item
if (trimmed.startsWith('- ')) {
const value = trimmed.substring(2).trim()
if (indent === 0) {
// Top-level array item
if (value.includes(':')) {
// Object in array
currentObject = {}
result.push(currentObject)
const [key, val] = value.split(':').map(s => s.trim())
currentObject[key] = this.parseYAMLValue(val)
} else {
result.push(this.parseYAMLValue(value))
}
} else if (currentObject) {
// Nested array
const lastKey = Object.keys(currentObject).pop()
if (lastKey) {
if (!Array.isArray(currentObject[lastKey])) {
currentObject[lastKey] = []
}
currentObject[lastKey].push(this.parseYAMLValue(value))
}
}
} else if (trimmed.includes(':')) {
// Key-value pair
const colonIndex = trimmed.indexOf(':')
const key = trimmed.substring(0, colonIndex).trim()
const value = trimmed.substring(colonIndex + 1).trim()
if (indent === 0) {
// Top-level object
if (!currentObject) {
currentObject = {}
result.push(currentObject)
}
currentObject[key] = this.parseYAMLValue(value)
currentIndent = 0
} else if (currentObject) {
// Nested object
if (indent > currentIndent && !value) {
// Start of nested object
const lastKey = Object.keys(currentObject).pop()
if (lastKey) {
currentObject[lastKey] = { [key]: '' }
}
} else {
currentObject[key] = this.parseYAMLValue(value)
}
currentIndent = indent
}
}
}
// If we built a single object and not an array, wrap it
if (result.length === 0 && currentObject) {
result.push(currentObject)
}
return result.length > 0 ? result : [{ text: content }]
} catch (error) {
prodLog.warn('YAML parsing failed, treating as text:', error)
return [{ text: content }]
}
}
/**
* Parse a YAML value (handle strings, numbers, booleans, null)
*/
private parseYAMLValue(value: string): any {
if (!value || value === '~' || value === 'null') return null
if (value === 'true') return true
if (value === 'false') return false
// Remove quotes if present
if ((value.startsWith('"') && value.endsWith('"')) ||
(value.startsWith("'") && value.endsWith("'"))) {
return value.slice(1, -1)
}
// Try to parse as number
const num = Number(value)
if (!isNaN(num) && value !== '') return num
return value
}
/**
* Perform neural analysis on parsed data
*/
private async performNeuralAnalysis(data: any[], config?: any): Promise<NeuralAnalysisResult> {
const detectedEntities: DetectedEntity[] = []
const detectedRelationships: DetectedRelationship[] = []
const insights: NeuralInsight[] = []
// Simple entity detection (in real implementation, would use ML)
for (const item of data) {
if (typeof item === 'object') {
// Detect entities from object properties
const entityId = item.id || item.name || item.title || `entity_${Date.now()}_${Math.random()}`
detectedEntities.push({
originalData: item,
nounType: await this.inferNounType(item),
confidence: 0.85,
suggestedId: String(entityId),
reasoning: 'Detected from structured data',
alternativeTypes: []
})
// Detect relationships from references
await this.detectRelationships(item, entityId, detectedRelationships)
}
}
// Generate insights
if (detectedEntities.length > 10) {
insights.push({
type: 'pattern',
description: `Large dataset with ${detectedEntities.length} entities detected`,
confidence: 0.9,
affectedEntities: detectedEntities.slice(0, 5).map(e => e.suggestedId),
recommendation: 'Consider batch processing for optimal performance'
})
}
// Look for clusters
const typeGroups = this.groupByType(detectedEntities)
if (Object.keys(typeGroups).length > 1) {
insights.push({
type: 'cluster',
description: `Multiple entity types detected: ${Object.keys(typeGroups).join(', ')}`,
confidence: 0.8,
affectedEntities: [],
recommendation: 'Data contains diverse entity types suitable for graph analysis'
})
}
return {
detectedEntities,
detectedRelationships,
confidence: detectedEntities.length > 0 ? 0.85 : 0.5,
insights
}
}
/**
* Infer noun type from object structure using field heuristics
*/
private async inferNounType(obj: any): Promise<string> {
if (typeof obj !== 'object' || obj === null) return NounType.Thing
// Check for explicit type field
if (obj.type && typeof obj.type === 'string') {
const normalized = obj.type.charAt(0).toUpperCase() + obj.type.slice(1)
if (Object.values(NounType).includes(normalized as NounType)) {
return normalized as NounType
}
}
if (obj.email || obj.firstName || obj.lastName || obj.username) return NounType.Person
if (obj.companyName || obj.organizationId || obj.employees) return NounType.Organization
if (obj.latitude || obj.longitude || obj.address || obj.city) return NounType.Location
if ((obj.content && (obj.title || obj.author)) || obj.pages) return NounType.Document
if (obj.startTime || obj.endTime || obj.date || obj.attendees) return NounType.Event
if (obj.price || obj.sku || obj.productId) return NounType.Product
if ((obj.status && obj.assignee) || obj.priority) return NounType.Task
if (Array.isArray(obj.data) || obj.rows || obj.columns) return NounType.Dataset
return NounType.Thing
}
/**
* Detect relationships from object references
*/
private async detectRelationships(obj: any, sourceId: string, relationships: DetectedRelationship[]): Promise<void> {
// Look for reference patterns
for (const [key, value] of Object.entries(obj)) {
if (key.endsWith('Id') || key.endsWith('_id') || key === 'parentId' || key === 'userId') {
relationships.push({
sourceId,
targetId: String(value),
verbType: await this.inferVerbType(key, obj, { id: value }),
confidence: 0.75,
weight: 1,
reasoning: `Reference detected in field: ${key}`,
context: key
})
}
// Array of IDs
if (Array.isArray(value) && value.length > 0 && typeof value[0] === 'string') {
if (key.endsWith('Ids') || key.endsWith('_ids')) {
for (const targetId of value) {
relationships.push({
sourceId,
targetId: String(targetId),
verbType: await this.inferVerbType(key, obj, { id: targetId }),
confidence: 0.7,
weight: 1,
reasoning: `Array reference in field: ${key}`,
context: key
})
}
}
}
}
}
/**
* Infer verb type from field name using common patterns
*/
private async inferVerbType(fieldName: string, _sourceObj?: any, _targetObj?: any): Promise<string> {
const field = fieldName.toLowerCase()
if (field.includes('parent') || field.includes('child') || field.includes('contain')) {
return VerbType.Contains
}
if (field.includes('owner') || field.includes('created') || field.includes('author')) {
return VerbType.Creates
}
if (field.includes('member') || field.includes('belong')) {
return VerbType.MemberOf
}
if (field.includes('depend') || field.includes('require')) {
return VerbType.DependsOn
}
if (field.includes('ref') || field.includes('link') || field.includes('source')) {
return VerbType.References
}
return VerbType.RelatedTo
}
/**
* Group entities by type
*/
private groupByType(entities: DetectedEntity[]): Record<string, DetectedEntity[]> {
const groups: Record<string, DetectedEntity[]> = {}
for (const entity of entities) {
if (!groups[entity.nounType]) {
groups[entity.nounType] = []
}
groups[entity.nounType].push(entity)
}
return groups
}
/**
* Store neural analysis results
*/
private async storeNeuralAnalysis(analysis: NeuralAnalysisResult): Promise<void> {
// Cache the analysis for potential later use
const key = `analysis_${Date.now()}`
this.analysisCache.set(key, analysis)
// Limit cache size
if (this.analysisCache.size > 100) {
const firstKey = this.analysisCache.keys().next().value
if (firstKey) {
this.analysisCache.delete(firstKey)
}
}
}
/**
* Helper to get data type from file path
*/
private getDataTypeFromPath(filePath: string): string {
const ext = path.extname(filePath).toLowerCase()
switch (ext) {
case '.json': return 'json'
case '.csv': return 'csv'
case '.txt': return 'text'
case '.yaml':
case '.yml': return 'yaml'
default: return 'text'
}
}
/**
* PUBLIC API: Process raw data (for external use, like Synapses)
* This maintains compatibility with code that wants to use Neural Import directly
*/
async processRawData(
rawData: Buffer | string,
dataType: string,
options?: Record<string, unknown>
): Promise<{
success: boolean
data: {
nouns: string[]
verbs: string[]
confidence?: number
insights?: Array<{
type: string
description: string
confidence: number
}>
metadata?: Record<string, unknown>
}
error?: string
}> {
try {
const analysis = await this.getNeuralAnalysis(rawData, dataType)
// Convert to legacy format for compatibility
const nouns = analysis.detectedEntities.map(e => e.suggestedId)
const verbs = analysis.detectedRelationships.map(r =>
`${r.sourceId}->${r.verbType}->${r.targetId}`
)
return {
success: true,
data: {
nouns,
verbs,
confidence: analysis.confidence,
insights: analysis.insights.map(i => ({
type: i.type,
description: i.description,
confidence: i.confidence
})),
metadata: {
detectedEntities: analysis.detectedEntities.length,
detectedRelationships: analysis.detectedRelationships.length,
timestamp: new Date().toISOString()
}
}
}
} catch (error) {
return {
success: false,
data: { nouns: [], verbs: [] },
error: error instanceof Error ? error.message : 'Neural analysis failed'
}
}
}
}

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@ -1,479 +0,0 @@
/**
* Smart Import Presets - Zero-Configuration Auto-Detection
*
* Automatically selects optimal import strategy based on:
* - File type (Excel, CSV, PDF, Markdown, JSON)
* - File size and row count
* - Column structure (explicit relationships vs narrative)
* - Available memory and performance requirements
*
* Production-ready: Handles billions of entities with optimal performance
*/
import { NounType, VerbType } from '../types/graphTypes.js'
/**
* Signal types used for entity classification
*/
export type SignalType = 'embedding' | 'exact' | 'pattern' | 'context'
/**
* Strategy types used for relationship extraction
*/
export type StrategyType = 'explicit' | 'pattern' | 'embedding'
/**
* Import context for preset auto-detection
*/
export interface ImportContext {
fileType?: 'excel' | 'csv' | 'json' | 'pdf' | 'markdown' | 'unknown'
fileSize?: number // bytes
rowCount?: number
hasExplicitColumns?: boolean // Has "Related Terms" or similar columns
hasNarrativeContent?: boolean // Has long-form text/descriptions
avgDefinitionLength?: number // Average length of definitions
memoryAvailable?: number // bytes
}
/**
* Signal configuration with weights
*/
export interface SignalConfig {
enabled: SignalType[]
weights: Record<SignalType, number>
timeout: number // milliseconds
}
/**
* Strategy configuration with priorities
*/
export interface StrategyConfig {
enabled: StrategyType[]
timeout: number // milliseconds
earlyTermination: boolean
minConfidence: number
}
/**
* Complete preset configuration
*/
export interface PresetConfig {
name: string
description: string
signals: SignalConfig
strategies: StrategyConfig
streaming: boolean
batchSize: number
}
/**
* Fast Preset - For large imports (>10K rows)
*
* Optimized for speed over accuracy:
* - Only exact match and pattern signals
* - Only explicit strategy (O(1) lookups)
* - Streaming enabled for memory efficiency
* - Early termination on first high-confidence match
*
* Use case: Bulk imports, data migrations
* Performance: ~10ms per row
* Accuracy: ~85%
*/
export const FAST_PRESET: PresetConfig = {
name: 'fast',
description: 'Fast bulk import for large datasets',
signals: {
enabled: ['exact', 'pattern'],
weights: {
exact: 0.70,
pattern: 0.30,
embedding: 0,
context: 0
},
timeout: 50
},
strategies: {
enabled: ['explicit'],
timeout: 100,
earlyTermination: true,
minConfidence: 0.70
},
streaming: true,
batchSize: 1000
}
/**
* Balanced Preset - Default for most imports
*
* Good balance of speed and accuracy:
* - All signals except context (embedding, exact, pattern)
* - All strategies with smart ordering
* - Moderate timeouts
* - Early termination after high-confidence matches
*
* Use case: Standard imports, general glossaries
* Performance: ~30ms per row
* Accuracy: ~92%
*/
export const BALANCED_PRESET: PresetConfig = {
name: 'balanced',
description: 'Balanced speed and accuracy for most imports',
signals: {
enabled: ['exact', 'embedding', 'pattern'],
weights: {
exact: 0.40,
embedding: 0.35,
pattern: 0.25,
context: 0
},
timeout: 100
},
strategies: {
enabled: ['explicit', 'pattern', 'embedding'],
timeout: 200,
earlyTermination: true,
minConfidence: 0.65
},
streaming: false,
batchSize: 500
}
/**
* Accurate Preset - For small, critical imports
*
* Optimized for accuracy over speed:
* - All signals including context
* - All strategies, no early termination
* - Longer timeouts for thorough analysis
* - Lower confidence threshold (accept more matches)
*
* Use case: Knowledge bases, critical taxonomies
* Performance: ~100ms per row
* Accuracy: ~97%
*/
export const ACCURATE_PRESET: PresetConfig = {
name: 'accurate',
description: 'Maximum accuracy for critical imports',
signals: {
enabled: ['exact', 'embedding', 'pattern', 'context'],
weights: {
exact: 0.40,
embedding: 0.35,
pattern: 0.20,
context: 0.05
},
timeout: 500
},
strategies: {
enabled: ['explicit', 'pattern', 'embedding'],
timeout: 1000,
earlyTermination: false,
minConfidence: 0.50
},
streaming: false,
batchSize: 100
}
/**
* Explicit Preset - For glossaries with relationship columns
*
* Optimized for structured data with explicit relationships:
* - Only exact match signals (no AI needed)
* - Only explicit and pattern strategies
* - Fast, deterministic results
* - Perfect for Excel/CSV with "Related Terms" columns
*
* Use case: structured taxonomies and glossaries from spreadsheet sources
* Performance: ~5ms per row
* Accuracy: ~99% (high confidence)
*/
export const EXPLICIT_PRESET: PresetConfig = {
name: 'explicit',
description: 'For glossaries with explicit relationship columns',
signals: {
enabled: ['exact', 'pattern'],
weights: {
exact: 0.70,
pattern: 0.30,
embedding: 0,
context: 0
},
timeout: 50
},
strategies: {
enabled: ['explicit', 'pattern'],
timeout: 100,
earlyTermination: true,
minConfidence: 0.80
},
streaming: false,
batchSize: 500
}
/**
* Pattern Preset - For documents with narrative content
*
* Optimized for unstructured text with rich patterns:
* - Embedding and pattern signals (semantic understanding)
* - Pattern and embedding strategies
* - Good for PDFs, articles, documentation
*
* Use case: PDF imports, markdown docs, articles
* Performance: ~50ms per row
* Accuracy: ~90%
*/
export const PATTERN_PRESET: PresetConfig = {
name: 'pattern',
description: 'For documents with narrative content',
signals: {
enabled: ['embedding', 'pattern', 'context'],
weights: {
embedding: 0.50,
pattern: 0.40,
context: 0.10,
exact: 0
},
timeout: 200
},
strategies: {
enabled: ['pattern', 'embedding'],
timeout: 300,
earlyTermination: false,
minConfidence: 0.60
},
streaming: false,
batchSize: 200
}
/**
* All available presets
*/
export const PRESETS: Record<string, PresetConfig> = {
fast: FAST_PRESET,
balanced: BALANCED_PRESET,
accurate: ACCURATE_PRESET,
explicit: EXPLICIT_PRESET,
pattern: PATTERN_PRESET
}
/**
* Auto-detect optimal preset based on import context
*
* Decision tree:
* 1. Large dataset (>10K rows or >10MB) fast
* 2. Small dataset (<100 rows) accurate
* 3. Excel/CSV with explicit columns explicit
* 4. PDF/Markdown with long content pattern
* 5. Default balanced
*
* @param context Import context (file type, size, structure)
* @returns Optimal preset configuration
*/
export function autoDetectPreset(context: ImportContext = {}): PresetConfig {
const {
fileType = 'unknown',
fileSize = 0,
rowCount = 0,
hasExplicitColumns = false,
hasNarrativeContent = false,
avgDefinitionLength = 0
} = context
// Rule 1: Large imports → fast preset (prioritize speed)
if (rowCount > 10000 || fileSize > 10_000_000) {
return FAST_PRESET
}
// Rule 2: Small critical imports → accurate preset (prioritize accuracy)
if (rowCount > 0 && rowCount < 100) {
return ACCURATE_PRESET
}
// Rule 3: Structured data with explicit relationships → explicit preset
// (Handles spreadsheet imports where relationships are encoded in columns.)
if (hasExplicitColumns && (fileType === 'excel' || fileType === 'csv')) {
return EXPLICIT_PRESET
}
// Rule 4: Narrative content → pattern preset
// Good for PDFs, articles, documentation
if (
hasNarrativeContent ||
fileType === 'pdf' ||
fileType === 'markdown' ||
avgDefinitionLength > 500
) {
return PATTERN_PRESET
}
// Rule 5: JSON data → balanced preset
if (fileType === 'json') {
return BALANCED_PRESET
}
// Default: balanced preset
return BALANCED_PRESET
}
/**
* Get preset by name
*
* @param name Preset name (fast, balanced, accurate, explicit, pattern)
* @returns Preset configuration
* @throws Error if preset not found
*/
export function getPreset(name: string): PresetConfig {
const preset = PRESETS[name.toLowerCase()]
if (!preset) {
throw new Error(`Unknown preset: ${name}. Available: ${Object.keys(PRESETS).join(', ')}`)
}
return preset
}
/**
* Get all available preset names
*
* @returns Array of preset names
*/
export function getPresetNames(): string[] {
return Object.keys(PRESETS)
}
/**
* Explain why a preset was selected
*
* @param context Import context
* @returns Human-readable explanation
*/
export function explainPresetChoice(context: ImportContext = {}): string {
const {
fileType = 'unknown',
fileSize = 0,
rowCount = 0,
hasExplicitColumns = false,
hasNarrativeContent = false,
avgDefinitionLength = 0
} = context
if (rowCount > 10000 || fileSize > 10_000_000) {
return `Large dataset (${rowCount} rows, ${(fileSize / 1_000_000).toFixed(1)}MB) → fast preset for optimal performance`
}
if (rowCount > 0 && rowCount < 100) {
return `Small critical dataset (${rowCount} rows) → accurate preset for maximum accuracy`
}
if (hasExplicitColumns && (fileType === 'excel' || fileType === 'csv')) {
return `${fileType.toUpperCase()} with explicit relationship columns → explicit preset for deterministic results`
}
if (hasNarrativeContent || fileType === 'pdf' || fileType === 'markdown') {
return `Narrative content (${fileType}) → pattern preset for semantic understanding`
}
if (fileType === 'json') {
return `JSON data → balanced preset for structured imports`
}
return `Standard import → balanced preset (default)`
}
/**
* Create custom preset by merging with base preset
*
* @param baseName Base preset name
* @param overrides Custom overrides
* @returns Custom preset configuration
*/
export function createCustomPreset(
baseName: string,
overrides: Partial<PresetConfig>
): PresetConfig {
const base = getPreset(baseName)
return {
...base,
...overrides,
signals: {
...base.signals,
...(overrides.signals || {})
},
strategies: {
...base.strategies,
...(overrides.strategies || {})
}
}
}
/**
* Validate preset configuration
*
* @param preset Preset to validate
* @returns True if valid, throws error otherwise
*/
export function validatePreset(preset: PresetConfig): boolean {
// Validate signals
if (preset.signals.enabled.length === 0) {
throw new Error('Preset must have at least one enabled signal')
}
// Validate strategies
if (preset.strategies.enabled.length === 0) {
throw new Error('Preset must have at least one enabled strategy')
}
// Validate weights sum to ~1.0
const enabledSignals = preset.signals.enabled
const totalWeight = enabledSignals.reduce(
(sum, signal) => sum + preset.signals.weights[signal],
0
)
if (Math.abs(totalWeight - 1.0) > 0.01) {
throw new Error(
`Signal weights must sum to 1.0, got ${totalWeight.toFixed(2)}`
)
}
// Validate timeouts
if (preset.signals.timeout <= 0 || preset.strategies.timeout <= 0) {
throw new Error('Timeouts must be positive')
}
// Validate batch size
if (preset.batchSize <= 0) {
throw new Error('Batch size must be positive')
}
return true
}
/**
* Format preset for display
*
* @param preset Preset configuration
* @returns Human-readable preset summary
*/
export function formatPreset(preset: PresetConfig): string {
const lines = [
`Preset: ${preset.name}`,
`Description: ${preset.description}`,
'',
'Signals:',
...preset.signals.enabled.map(
(s) => ` - ${s}: ${(preset.signals.weights[s] * 100).toFixed(0)}%`
),
` Timeout: ${preset.signals.timeout}ms`,
'',
'Strategies:',
...preset.strategies.enabled.map((s) => ` - ${s}`),
` Timeout: ${preset.strategies.timeout}ms`,
` Early termination: ${preset.strategies.earlyTermination}`,
` Min confidence: ${preset.strategies.minConfidence}`,
'',
`Streaming: ${preset.streaming}`,
`Batch size: ${preset.batchSize}`
]
return lines.join('\n')
}

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/**
* Relationship Confidence Scoring
*
* Scores the confidence of detected relationships based on multiple factors:
* - Entity proximity in text
* - Entity confidence scores
* - Pattern matches
* - Structural analysis
*/
import { ExtractedEntity } from './entityExtractor.js'
import { VerbType } from '../types/graphTypes.js'
import { RelationEvidence } from '../types/brainy.types.js'
/**
* Detected relationship with confidence
*/
export interface DetectedRelationship {
sourceEntity: ExtractedEntity
targetEntity: ExtractedEntity
verbType: VerbType
confidence: number
evidence: RelationEvidence
}
/**
* Configuration for relationship detection
*/
export interface RelationshipDetectionConfig {
minConfidence?: number // Minimum confidence to return (default: 0.5)
maxDistance?: number // Maximum token distance between entities (default: 50)
useProximityBoost?: boolean // Boost score based on proximity (default: true)
usePatternMatching?: boolean // Use verb pattern matching (default: true)
useStructuralAnalysis?: boolean // Analyze sentence structure (default: true)
}
/**
* Relationship confidence scorer
*/
export class RelationshipConfidenceScorer {
private config: Required<RelationshipDetectionConfig>
constructor(config: RelationshipDetectionConfig = {}) {
this.config = {
minConfidence: config.minConfidence || 0.5,
maxDistance: config.maxDistance || 50,
useProximityBoost: config.useProximityBoost !== false,
usePatternMatching: config.usePatternMatching !== false,
useStructuralAnalysis: config.useStructuralAnalysis !== false
}
}
/**
* Score a potential relationship between two entities
*/
scoreRelationship(
source: ExtractedEntity,
target: ExtractedEntity,
verbType: VerbType,
context: string
): { confidence: number, evidence: RelationEvidence } {
let confidence = 0.5 // Base confidence
// Evidence tracking
const reasoningParts: string[] = []
// Factor 1: Proximity boost (closer entities = higher confidence)
if (this.config.useProximityBoost) {
const proximityBoost = this.calculateProximityBoost(source, target)
confidence += proximityBoost
if (proximityBoost > 0) {
reasoningParts.push(
`Entities are close together (boost: +${proximityBoost.toFixed(2)})`
)
}
}
// Factor 2: Entity confidence boost
const entityConfidence = (source.confidence + target.confidence) / 2
const entityBoost = (entityConfidence - 0.5) * 0.2 // Scale to 0-0.2
confidence *= (1 + entityBoost)
if (entityBoost > 0) {
reasoningParts.push(
`High entity confidence (boost: ${entityBoost.toFixed(2)})`
)
}
// Factor 3: Pattern match boost
if (this.config.usePatternMatching) {
const patternBoost = this.checkVerbPattern(source, target, verbType, context)
confidence += patternBoost
if (patternBoost > 0) {
reasoningParts.push(
`Matches relationship pattern (boost: +${patternBoost.toFixed(2)})`
)
}
}
// Factor 4: Structural boost (same sentence, clause, etc.)
if (this.config.useStructuralAnalysis) {
const structuralBoost = this.analyzeStructure(source, target, context)
confidence += structuralBoost
if (structuralBoost > 0) {
reasoningParts.push(
`Structural relationship (boost: +${structuralBoost.toFixed(2)})`
)
}
}
// Cap confidence at 1.0
confidence = Math.min(confidence, 1.0)
// Extract source text evidence
const start = Math.min(source.position.start, target.position.start)
const end = Math.max(source.position.end, target.position.end)
const evidence: RelationEvidence = {
sourceText: context.substring(start, end),
position: { start, end },
method: 'neural',
reasoning: reasoningParts.join('; ')
}
return { confidence, evidence }
}
/**
* Calculate proximity boost based on distance between entities
*/
private calculateProximityBoost(
source: ExtractedEntity,
target: ExtractedEntity
): number {
const distance = Math.abs(source.position.start - target.position.start)
if (distance === 0) return 0 // Same position, not meaningful
// Very close (< 20 chars): +0.2
if (distance < 20) return 0.2
// Close (< 50 chars): +0.1
if (distance < 50) return 0.1
// Medium (< 100 chars): +0.05
if (distance < 100) return 0.05
// Far (> 100 chars): no boost
return 0
}
/**
* Check if entities match a verb pattern
*/
private checkVerbPattern(
source: ExtractedEntity,
target: ExtractedEntity,
verbType: VerbType,
context: string
): number {
const contextBetween = this.getContextBetween(source, target, context)
const contextLower = contextBetween.toLowerCase()
// Verb-specific patterns
const patterns: Record<string, string[]> = {
[VerbType.Creates]: ['creates', 'made', 'built', 'developed', 'produces'],
[VerbType.Owns]: ['owns', 'belongs to', 'possessed by', 'has'],
[VerbType.Contains]: ['contains', 'includes', 'has', 'holds'],
[VerbType.Requires]: ['requires', 'needs', 'depends on', 'relies on'],
[VerbType.Uses]: ['uses', 'utilizes', 'employs', 'applies'],
[VerbType.ReportsTo]: ['manages', 'oversees', 'supervises', 'controls'],
[VerbType.Causes]: ['influences', 'affects', 'impacts', 'shapes', 'causes'],
[VerbType.DependsOn]: ['depends on', 'relies on', 'based on'],
[VerbType.Modifies]: ['modifies', 'changes', 'alters', 'updates'],
[VerbType.References]: ['references', 'cites', 'mentions', 'refers to']
}
const verbPatterns = patterns[verbType] || []
for (const pattern of verbPatterns) {
if (contextLower.includes(pattern)) {
return 0.2 // Strong pattern match
}
}
return 0 // No pattern match
}
/**
* Analyze structural relationship
*/
private analyzeStructure(
source: ExtractedEntity,
target: ExtractedEntity,
context: string
): number {
const contextBetween = this.getContextBetween(source, target, context)
// Same sentence (no sentence-ending punctuation between them)
if (!contextBetween.match(/[.!?]/)) {
return 0.1
}
// Same paragraph (single newline between them)
if (!contextBetween.match(/\n\n/)) {
return 0.05
}
return 0
}
/**
* Get context text between two entities
*/
private getContextBetween(
source: ExtractedEntity,
target: ExtractedEntity,
context: string
): string {
const start = Math.min(source.position.end, target.position.end)
const end = Math.max(source.position.start, target.position.start)
if (start >= end) return ''
return context.substring(start, end)
}
/**
* Detect relationships between a list of entities
*/
detectRelationships(
entities: ExtractedEntity[],
context: string,
verbHints?: VerbType[]
): DetectedRelationship[] {
const relationships: DetectedRelationship[] = []
const verbs = verbHints || [
VerbType.Creates,
VerbType.Uses,
VerbType.Contains,
VerbType.Requires,
VerbType.RelatedTo
]
// Check all entity pairs
for (let i = 0; i < entities.length; i++) {
for (let j = i + 1; j < entities.length; j++) {
const source = entities[i]
const target = entities[j]
// Check distance
const distance = Math.abs(source.position.start - target.position.start)
if (distance > this.config.maxDistance) {
continue // Too far apart
}
// Try each verb type
for (const verbType of verbs) {
const { confidence, evidence } = this.scoreRelationship(
source,
target,
verbType,
context
)
if (confidence >= this.config.minConfidence) {
relationships.push({
sourceEntity: source,
targetEntity: target,
verbType,
confidence,
evidence
})
}
}
}
}
// Sort by confidence (highest first)
relationships.sort((a, b) => b.confidence - a.confidence)
return relationships
}
}
/**
* Convenience function to score a single relationship
*/
export function scoreRelationshipConfidence(
source: ExtractedEntity,
target: ExtractedEntity,
verbType: VerbType,
context: string,
config?: RelationshipDetectionConfig
): { confidence: number, evidence: RelationEvidence } {
const scorer = new RelationshipConfidenceScorer(config)
return scorer.scoreRelationship(source, target, verbType, context)
}
/**
* Convenience function to detect all relationships in text
*/
export function detectRelationshipsWithConfidence(
entities: ExtractedEntity[],
context: string,
config?: RelationshipDetectionConfig
): DetectedRelationship[] {
const scorer = new RelationshipConfidenceScorer(config)
return scorer.detectRelationships(entities, context)
}

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/**
* Static Pattern Matcher - NO runtime initialization, NO Brainy needed
*
* All patterns and embeddings are pre-computed at build time
* This is pure pattern matching with zero dependencies
*/
import { EMBEDDED_PATTERNS, getPatternEmbeddings } from './embeddedPatterns.js'
import type { Vector } from '../coreTypes.js'
import type { TripleQuery } from '../triple/TripleIntelligence.js'
// Pre-load patterns and embeddings at module load time (happens once)
const patterns = new Map(EMBEDDED_PATTERNS.map(p => [p.id, p]))
const patternEmbeddings = getPatternEmbeddings()
/**
* Cosine similarity between two vectors.
* Accepts any number-indexed sequence so pre-computed Float32Array pattern
* embeddings can be compared against number[] query vectors without copying.
*/
function cosineSimilarity(a: ArrayLike<number>, b: ArrayLike<number>): number {
if (!a || !b || a.length !== b.length) return 0
let dotProduct = 0
let normA = 0
let normB = 0
for (let i = 0; i < a.length; i++) {
dotProduct += a[i] * b[i]
normA += a[i] * a[i]
normB += b[i] * b[i]
}
const denominator = Math.sqrt(normA) * Math.sqrt(normB)
return denominator === 0 ? 0 : dotProduct / denominator
}
/**
* Extract slots from matched pattern
*/
function extractSlots(query: string, pattern: string): Record<string, string> | null {
try {
const regex = new RegExp(pattern, 'i')
const match = query.match(regex)
if (!match) return null
const slots: Record<string, string> = {}
for (let i = 1; i < match.length; i++) {
if (match[i]) {
slots[`$${i}`] = match[i]
}
}
return Object.keys(slots).length > 0 ? slots : null
} catch {
return null
}
}
/**
* Apply template with extracted slots
*/
function applyTemplate(template: any, slots: Record<string, string>): any {
if (!template || !slots) return template
const result = JSON.parse(JSON.stringify(template))
const applySlots = (obj: any): any => {
if (typeof obj === 'string') {
return obj.replace(/\$\{(\d+)\}/g, (_, num) => slots[`$${num}`] || '')
}
if (Array.isArray(obj)) {
return obj.map(applySlots)
}
if (typeof obj === 'object' && obj !== null) {
const newObj: any = {}
for (const [key, value] of Object.entries(obj)) {
newObj[key] = applySlots(value)
}
return newObj
}
return obj
}
return applySlots(result)
}
/**
* Match query against all patterns using embeddings
*/
export function findBestPatterns(
queryEmbedding: Vector,
k: number = 3
): Array<{ pattern: typeof EMBEDDED_PATTERNS[0]; similarity: number }> {
const matches: Array<{ pattern: typeof EMBEDDED_PATTERNS[0]; similarity: number }> = []
for (const pattern of EMBEDDED_PATTERNS) {
const patternEmbedding = patternEmbeddings.get(pattern.id)
if (!patternEmbedding) continue
// Pass Float32Array directly, no need for Array.from()!
const similarity = cosineSimilarity(queryEmbedding, patternEmbedding)
if (similarity > 0.5) { // Threshold for relevance
matches.push({ pattern, similarity })
}
}
// Sort by similarity and return top k
return matches
.sort((a, b) => b.similarity - a.similarity)
.slice(0, k)
}
/**
* Match query against patterns using regex
*/
export function matchPatternByRegex(query: string): {
pattern: typeof EMBEDDED_PATTERNS[0]
slots: Record<string, string>
query: TripleQuery
} | null {
// Try direct regex matching first (fastest)
for (const pattern of EMBEDDED_PATTERNS) {
const slots = extractSlots(query, pattern.pattern)
if (slots) {
const templatedQuery = applyTemplate(pattern.template, slots)
return {
pattern,
slots,
query: templatedQuery
}
}
}
return null
}
/**
* Convert natural language to structured query using STATIC patterns
* NO initialization needed, NO Brainy required
*/
export function patternMatchQuery(
query: string,
queryEmbedding?: Vector
): TripleQuery {
// ALWAYS use vector similarity when we have embeddings (which we always do!)
if (queryEmbedding && queryEmbedding.length === 384) {
const bestPatterns = findBestPatterns(queryEmbedding, 5) // Get top 5 matches
// Try to extract slots from best matching patterns
for (const { pattern, similarity } of bestPatterns) {
// Only try patterns with good similarity
if (similarity < 0.7) break
const slots = extractSlots(query, pattern.pattern)
if (slots) {
// Found a good match with extractable slots!
const result = applyTemplate(pattern.template, slots)
console.log('[NLP] Applied template with slots:', JSON.stringify(result))
return result
}
}
// If no slots extracted but we have a good match, use the template as-is
if (bestPatterns.length > 0 && bestPatterns[0].similarity > 0.75) {
console.log('[NLP] Returning template as-is:', JSON.stringify(bestPatterns[0].pattern.template))
return bestPatterns[0].pattern.template
}
}
// Fallback: simple vector search (should rarely happen)
console.log('[NLP] Fallback - returning simple query')
return {
like: query,
limit: 10
}
}
// Export pattern statistics for monitoring
export const PATTERN_STATS = {
totalPatterns: EMBEDDED_PATTERNS.length,
categories: [...new Set(EMBEDDED_PATTERNS.map(p => p.category))],
domains: [...new Set(EMBEDDED_PATTERNS.filter(p => p.domain).map(p => p.domain!))],
hasEmbeddings: patternEmbeddings.size > 0
}

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/**
* Transaction System
*
* Provides atomicity for Brainy operations.
* All operations succeed or all rollback - no partial failures.
*
* @module transaction
*/
export * from './types.js'
export * from './errors.js'
export { Transaction } from './Transaction.js'
export { TransactionManager, type TransactionStats } from './TransactionManager.js'
// Re-export for convenience
export type {
Operation,
RollbackAction,
TransactionState,
TransactionContext,
TransactionFunction,
TransactionResult,
TransactionOptions
} from './types.js'
export {
TransactionError,
TransactionExecutionError,
TransactionRollbackError,
InvalidTransactionStateError,
TransactionTimeoutError
} from './errors.js'
export { RevisionConflictError } from './RevisionConflictError.js'

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/**
* Consistent API Types for Brainy
*
* These types provide a uniform interface for all public methods,
* using object parameters for consistency and extensibility.
*/
import type { Vector } from '../coreTypes.js'
import type { NounType, VerbType } from './graphTypes.js'
// ============= NOUN OPERATIONS =============
/**
* Parameters for adding a noun
*/
export interface AddNounParams {
data: any | Vector // Content or pre-computed vector
type: NounType | string // Noun type (required)
metadata?: any // Optional metadata
id?: string // Optional custom ID
service?: string // Optional service identifier
}
/**
* Parameters for updating a noun
*/
export interface UpdateNounParams {
id: string // Noun ID to update
data?: any // New data
metadata?: any // New metadata
type?: NounType | string // New type
}
/**
* Parameters for getting nouns
*/
export interface GetNounsParams {
ids?: string[] // Specific IDs to fetch
type?: NounType | string | string[] // Filter by type(s)
limit?: number // Maximum results
offset?: number // Pagination offset
cursor?: string // Pagination cursor
filter?: Record<string, any> // Metadata filters
service?: string // Service filter
}
// ============= VERB OPERATIONS =============
/**
* Parameters for adding a verb (relationship)
*/
export interface AddVerbParams {
source: string // Source noun ID
target: string // Target noun ID
type: VerbType | string // Verb type (required)
weight?: number // Relationship weight (0-1)
metadata?: any // Optional metadata
service?: string // Optional service identifier
}
/**
* Parameters for getting verbs
*/
export interface GetVerbsParams {
source?: string // Filter by source
target?: string // Filter by target
type?: VerbType | string | string[] // Filter by type(s)
limit?: number // Maximum results
offset?: number // Pagination offset
cursor?: string // Pagination cursor
filter?: Record<string, any> // Metadata filters
service?: string // Service filter
}
// ============= SEARCH OPERATIONS =============
/**
* Unified search parameters
*/
export interface SearchParams {
query: string | Vector // Text query or vector
limit?: number // Maximum results (default: 10)
threshold?: number // Similarity threshold (0-1)
filter?: {
type?: NounType | string | string[] // Filter by noun type(s)
metadata?: Record<string, any> // Metadata filters
service?: string // Service filter
}
includeMetadata?: boolean // Include metadata in results
includeVectors?: boolean // Include vectors in results
}
/**
* Parameters for similarity search
*/
export interface SimilarityParams {
id?: string // Find similar to this ID
data?: any | Vector // Or find similar to this data
limit?: number // Maximum results (default: 10)
threshold?: number // Similarity threshold (0-1)
filter?: {
type?: NounType | string | string[]
metadata?: Record<string, any>
service?: string
}
}
/**
* Parameters for related items search
*/
export interface RelatedParams {
id: string // Starting noun ID
depth?: number // Traversal depth (default: 1)
limit?: number // Max results per level
types?: VerbType[] | string[] // Relationship types to follow
direction?: 'outgoing' | 'incoming' | 'both'
}
// ============= BATCH OPERATIONS =============
/**
* Parameters for batch noun operations
*/
export interface BatchNounsParams {
items: AddNounParams[] // Array of nouns to add
parallel?: boolean // Process in parallel
chunkSize?: number // Batch size for processing
onProgress?: (completed: number, total: number) => void
}
/**
* Parameters for batch verb operations
*/
export interface BatchVerbsParams {
items: AddVerbParams[] // Array of verbs to add
parallel?: boolean // Process in parallel
chunkSize?: number // Batch size for processing
onProgress?: (completed: number, total: number) => void
}
// ============= STATISTICS & METADATA =============
/**
* Parameters for statistics queries
*/
export interface StatisticsParams {
detailed?: boolean // Include detailed breakdown
includeAugmentations?: boolean // Include augmentation stats
includeMemory?: boolean // Include memory usage
service?: string // Filter by service
}
/**
* Parameters for metadata operations
*/
export interface MetadataParams {
id: string // Entity ID
metadata: any // Metadata to set/update
merge?: boolean // Merge with existing (vs replace)
}
// ============= CONFIGURATION =============
/**
* Dynamic configuration update parameters
*/
export interface ConfigUpdateParams {
embeddings?: {
model?: string
precision?: 'q8'
cache?: boolean
}
augmentations?: {
[name: string]: boolean | Record<string, any>
}
storage?: {
type?: string
config?: any
}
performance?: {
batchSize?: number
maxConcurrency?: number
cacheSize?: number
}
}
// ============= TRIPLE INTELLIGENCE API =============
/**
* API for Triple Intelligence Engine to access Brainy internals
* This provides type-safe access without unchecked casts
*/
export interface TripleIntelligenceAPI {
// Vector operations
vectorSearch(vector: Vector | string, limit: number): Promise<Array<{id: string, score: number, entity?: any}>>
// Graph operations
graphTraversal(options: {
start: string | string[]
type?: string | string[]
direction?: 'in' | 'out' | 'both'
maxDepth?: number
}): Promise<Array<{id: string, score: number, depth: number}>>
// Metadata operations
metadataQuery(where: Record<string, any>): Promise<Set<string>>
getEntity(id: string): Promise<any>
// Storage operations
getVerbsBySource(sourceId: string): Promise<any[]>
getVerbsByTarget(targetId: string): Promise<any[]>
// Statistics
getStatistics(): Promise<{
totalCount: number
fieldStats: Record<string, {
min: number
max: number
cardinality: number
type: string
}>
}>
// Index access
getAllNouns(): Map<string, any>
hasMetadataIndex(): boolean
}
// ============= RESULTS =============
/**
* Unified search result
*/
export interface SearchResult<T = any> {
id: string
score: number // Similarity score (0-1)
data?: T // Original data
metadata?: any // Metadata if requested
vector?: Vector // Vector if requested
type?: string // Noun type
distance?: number // Raw distance metric
}
/**
* Paginated result wrapper
*/
export interface PaginatedResult<T> {
items: T[]
total?: number
hasMore: boolean
nextCursor?: string
previousCursor?: string
}
/**
* Batch operation result
*/
export interface BatchResult {
successful: string[] // Successfully processed IDs
failed: Array<{
index: number
error: string
item?: any
}>
total: number
duration: number // Total time in ms
}
/**
* Statistics result
*/
export interface StatisticsResult {
nouns: {
total: number
byType: Record<string, number>
}
verbs: {
total: number
byType: Record<string, number>
}
storage: {
used: number
type: string
}
performance?: {
avgLatency: number
throughput: number
cacheHitRate?: number
}
augmentations?: Record<string, any>
memory?: {
used: number
limit: number
}
}
// ============= ERRORS =============
/**
* Structured error for API operations
*/
export class BrainyAPIError extends Error {
constructor(
message: string,
public code: string,
public statusCode: number = 400,
public details?: any
) {
super(message)
this.name = 'BrainyAPIError'
}
}
// Error codes
export const ErrorCodes = {
INVALID_TYPE: 'INVALID_TYPE',
NOT_FOUND: 'NOT_FOUND',
DUPLICATE_ID: 'DUPLICATE_ID',
INVALID_VECTOR: 'INVALID_VECTOR',
STORAGE_ERROR: 'STORAGE_ERROR',
EMBEDDING_ERROR: 'EMBEDDING_ERROR',
AUGMENTATION_ERROR: 'AUGMENTATION_ERROR',
VALIDATION_ERROR: 'VALIDATION_ERROR',
QUOTA_EXCEEDED: 'QUOTA_EXCEEDED',
UNAUTHORIZED: 'UNAUTHORIZED'
} as const

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/**
* Type declarations for the File System Access API
* Extends the FileSystemDirectoryHandle interface to include the [Symbol.asyncIterator] method
* and FileSystemHandle to include getFile() method for TypeScript compatibility
*/
// Extend the FileSystemDirectoryHandle interface
interface FileSystemDirectoryHandle {
[Symbol.asyncIterator](): AsyncIterableIterator<[string, FileSystemHandle]>;
keys(): AsyncIterableIterator<string>;
entries(): AsyncIterableIterator<[string, FileSystemHandle]>;
}
// Extend the FileSystemHandle interface to include getFile method
// This is needed because TypeScript doesn't recognize that a FileSystemHandle
// can be a FileSystemFileHandle which has the getFile method
interface FileSystemHandle {
getFile?(): Promise<File>;
}
// Export something to make this a module
export const fileSystemTypesLoaded = true

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/**
* Standardized Progress Reporting
*
* Provides unified progress tracking across all long-running operations
* in Brainy (imports, clustering, large searches, etc.)
*/
/**
* Progress status states
*/
export type ProgressStatus = 'pending' | 'running' | 'completed' | 'failed' | 'cancelled'
/**
* Standardized progress report
*/
export interface BrainyProgress<T = any> {
// Core status
status: ProgressStatus
// Progress percentage (0-100)
progress: number
// Human-readable message
message: string
// Detailed metadata
metadata: {
itemsProcessed: number
itemsTotal: number
currentItem?: string
estimatedTimeRemaining?: number // milliseconds
startedAt: number
completedAt?: number
throughput?: number // items per second
}
// Result when completed
result?: T
// Error when failed
error?: Error
}
/**
* Progress tracker with automatic time estimation
*/
export class ProgressTracker<T = any> {
private status: ProgressStatus = 'pending'
private processed = 0
private total: number
private startedAt?: number
private completedAt?: number
private currentItem?: string
private result?: T
private error?: Error
private processingTimes: number[] = [] // Track last N processing times for estimation
constructor(total: number) {
if (total < 0) {
throw new Error('Total must be non-negative')
}
this.total = total
}
/**
* Factory method for creating progress trackers
*/
static create<T>(total: number): ProgressTracker<T> {
return new ProgressTracker<T>(total)
}
/**
* Start tracking progress
*/
start(): BrainyProgress<T> {
this.status = 'running'
this.startedAt = Date.now()
return this.current()
}
/**
* Update progress
*/
update(processed: number, currentItem?: string): BrainyProgress<T> {
if (processed < 0) {
throw new Error('Processed count must be non-negative')
}
if (processed > this.total) {
throw new Error(`Processed count (${processed}) exceeds total (${this.total})`)
}
const previousProcessed = this.processed
this.processed = processed
this.currentItem = currentItem
// Track processing time for estimation
if (this.startedAt && previousProcessed < processed) {
const itemsProcessed = processed - previousProcessed
const timeTaken = Date.now() - this.startedAt
const avgTimePerItem = timeTaken / processed
this.processingTimes.push(avgTimePerItem)
// Keep only last 100 measurements for rolling average
if (this.processingTimes.length > 100) {
this.processingTimes.shift()
}
}
return this.current()
}
/**
* Increment progress by 1
*/
increment(currentItem?: string): BrainyProgress<T> {
return this.update(this.processed + 1, currentItem)
}
/**
* Mark as completed
*/
complete(result: T): BrainyProgress<T> {
this.status = 'completed'
this.completedAt = Date.now()
this.processed = this.total
this.result = result
return this.current()
}
/**
* Mark as failed
*/
fail(error: Error): BrainyProgress<T> {
this.status = 'failed'
this.completedAt = Date.now()
this.error = error
return this.current()
}
/**
* Mark as cancelled
*/
cancel(): BrainyProgress<T> {
this.status = 'cancelled'
this.completedAt = Date.now()
return this.current()
}
/**
* Get current progress state
*/
current(): BrainyProgress<T> {
const progress = this.total > 0 ? Math.round((this.processed / this.total) * 100) : 0
// Generate message based on status
let message: string
switch (this.status) {
case 'pending':
message = `Ready to process ${this.total} items`
break
case 'running':
message = this.currentItem
? `Processing: ${this.currentItem} (${this.processed}/${this.total})`
: `Processing ${this.processed}/${this.total} items`
break
case 'completed':
message = `Completed ${this.total} items`
break
case 'failed':
message = `Failed after ${this.processed} items: ${this.error?.message || 'Unknown error'}`
break
case 'cancelled':
message = `Cancelled after ${this.processed} items`
break
}
return {
status: this.status,
progress,
message,
metadata: {
itemsProcessed: this.processed,
itemsTotal: this.total,
currentItem: this.currentItem,
estimatedTimeRemaining: this.estimateTimeRemaining(),
startedAt: this.startedAt || Date.now(),
completedAt: this.completedAt,
throughput: this.calculateThroughput()
},
result: this.result,
error: this.error
}
}
/**
* Estimate time remaining based on processing history
*/
private estimateTimeRemaining(): number | undefined {
if (this.status !== 'running' || !this.startedAt || this.processed === 0) {
return undefined
}
const remaining = this.total - this.processed
if (remaining === 0) {
return 0
}
// Use rolling average if we have enough samples
if (this.processingTimes.length > 0) {
const avgTimePerItem = this.processingTimes.reduce((a, b) => a + b, 0) / this.processingTimes.length
return Math.round(avgTimePerItem * remaining)
}
// Fallback to simple calculation
const elapsed = Date.now() - this.startedAt
const avgTimePerItem = elapsed / this.processed
return Math.round(avgTimePerItem * remaining)
}
/**
* Calculate current throughput (items/second)
*/
private calculateThroughput(): number | undefined {
if (!this.startedAt || this.processed === 0) {
return undefined
}
const elapsed = Date.now() - this.startedAt
const seconds = elapsed / 1000
return seconds > 0 ? Math.round((this.processed / seconds) * 100) / 100 : undefined
}
/**
* Get progress statistics
*/
getStats() {
const elapsed = this.startedAt ? Date.now() - this.startedAt : 0
return {
status: this.status,
processed: this.processed,
total: this.total,
remaining: this.total - this.processed,
progress: this.total > 0 ? this.processed / this.total : 0,
elapsed,
estimatedTotal: elapsed > 0 && this.processed > 0
? Math.round((elapsed / this.processed) * this.total)
: undefined,
throughput: this.calculateThroughput()
}
}
}
/**
* Helper to format time duration
*/
export function formatDuration(ms: number): string {
const seconds = Math.floor(ms / 1000)
const minutes = Math.floor(seconds / 60)
const hours = Math.floor(minutes / 60)
if (hours > 0) {
return `${hours}h ${minutes % 60}m`
} else if (minutes > 0) {
return `${minutes}m ${seconds % 60}s`
} else {
return `${seconds}s`
}
}
/**
* Helper to format progress percentage
*/
export function formatProgress(progress: BrainyProgress): string {
const { status, progress: pct, metadata } = progress
const remaining = metadata.estimatedTimeRemaining
let str = `[${status.toUpperCase()}] ${pct}% (${metadata.itemsProcessed}/${metadata.itemsTotal})`
if (metadata.throughput) {
str += ` - ${metadata.throughput} items/s`
}
if (remaining && remaining > 0) {
str += ` - ${formatDuration(remaining)} remaining`
}
return str
}

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/**
* Type Migration Utilities for Stage 3 Taxonomy
*
* Provides migration helpers for code using removed types from v5.x
*
* ## Removed Types
*
* ### Nouns (2 removed):
* - `user` merged into `person`
* - `topic` merged into `concept`
*
* ### Verbs (4 removed):
* - `succeeds` use inverse of `precedes`
* - `belongsTo` use inverse of `owns`
* - `createdBy` use inverse of `creates`
* - `supervises` use inverse of `reportsTo`
*/
import { NounType, VerbType } from './graphTypes.js'
/**
* Migration mapping for removed noun types
*/
export const REMOVED_NOUN_TYPES = {
user: NounType.Person,
topic: NounType.Concept
} as const
/**
* Migration mapping for removed verb types
* Note: Some verbs should use inverse relationships in Stage 3
*/
export const REMOVED_VERB_TYPES = {
succeeds: VerbType.Precedes, // Use with inverted source/target
belongsTo: VerbType.Owns, // Use with inverted source/target
createdBy: VerbType.Creates, // Use with inverted source/target
supervises: VerbType.ReportsTo // Use with inverted source/target
} as const
/**
* Check if a type was removed in Stage 3
*/
export function isRemovedNounType(type: string): type is keyof typeof REMOVED_NOUN_TYPES {
return type in REMOVED_NOUN_TYPES
}
/**
* Check if a verb type was removed in Stage 3
*/
export function isRemovedVerbType(type: string): type is keyof typeof REMOVED_VERB_TYPES {
return type in REMOVED_VERB_TYPES
}
/**
* Migrate a noun type (Stage 3)
* Returns the migrated type or the original if no migration needed
*/
export function migrateNounType(type: string): NounType {
if (isRemovedNounType(type)) {
console.warn(`⚠️ NounType "${type}" was removed in v6.0. Migrating to "${REMOVED_NOUN_TYPES[type]}"`)
return REMOVED_NOUN_TYPES[type]
}
return type as NounType
}
/**
* Migrate a verb type (Stage 3)
* Returns the migrated type or the original if no migration needed
*
* WARNING: Some verbs require inverting source/target relationships!
* See VERB_REQUIRES_INVERSION for details.
*/
export function migrateVerbType(type: string): VerbType {
if (isRemovedVerbType(type)) {
console.warn(`⚠️ VerbType "${type}" was removed in v6.0. Migrating to "${REMOVED_VERB_TYPES[type]}" (may require source/target inversion)`)
return REMOVED_VERB_TYPES[type]
}
return type as VerbType
}
/**
* Verbs that require inverting source/target when migrating
*
* Example:
* - Old: `A createdBy B` New: `B creates A`
* - Old: `A belongsTo B` New: `B owns A`
* - Old: `A supervises B` New: `B reportsTo A`
* - Old: `A succeeds B` New: `B precedes A`
*/
export const VERB_REQUIRES_INVERSION = new Set([
'succeeds',
'belongsTo',
'createdBy',
'supervises'
])
/**
* Check if a verb type requires inverting source/target during migration
*/
export function requiresInversion(oldVerbType: string): boolean {
return VERB_REQUIRES_INVERSION.has(oldVerbType)
}
/**
* Migrate a relationship, handling source/target inversion if needed
*
* @returns Object with migrated verb and potentially inverted source/target
*/
export function migrateRelationship(params: {
verb: string
source: string
target: string
}): {
verb: VerbType
source: string
target: string
inverted: boolean
} {
const verb = migrateVerbType(params.verb)
const inverted = requiresInversion(params.verb)
if (inverted) {
return {
verb,
source: params.target, // Swap source and target
target: params.source,
inverted: true
}
}
return {
verb,
source: params.source,
target: params.target,
inverted: false
}
}
/**
* Stage 3 Type Compatibility Check
* Helps developers identify code that needs updating
*/
export function checkTypeCompatibility(nounTypes: string[], verbTypes: string[]): {
valid: boolean
removedNouns: string[]
removedVerbs: string[]
warnings: string[]
} {
const removedNouns = nounTypes.filter(isRemovedNounType)
const removedVerbs = verbTypes.filter(isRemovedVerbType)
const warnings: string[] = []
if (removedNouns.length > 0) {
warnings.push(
`Found ${removedNouns.length} removed noun type(s): ${removedNouns.join(', ')}. ` +
`These were merged in Stage 3. Use Person instead of User, Concept instead of Topic.`
)
}
if (removedVerbs.length > 0) {
warnings.push(
`Found ${removedVerbs.length} removed verb type(s): ${removedVerbs.join(', ')}. ` +
`These require using inverse relationships in Stage 3. ` +
`Example: "A createdBy B" becomes "B creates A".`
)
}
return {
valid: removedNouns.length === 0 && removedVerbs.length === 0,
removedNouns,
removedVerbs,
warnings
}
}

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@ -1,39 +0,0 @@
/**
* @module unified
* @description Unified entry point for Brainy. Re-exports the public surface
* from `index.js` and surfaces a tiny runtime-environment object the rest of
* the library can read.
*
* 8.0 supports Node-like runtimes only (Node.js, Bun, Deno); the browser
* detection helpers and Worker Thread plumbing are gone.
*/
import './setup.js'
import { isNode } from './utils/environment.js'
export const environment = {
get isNode() {
return isNode()
}
}
declare global {
/**
* Runtime-environment marker published by the unified entry point so
* embedders and diagnostics can detect the active Brainy environment.
* Ambient `var` is required `let`/`const` in `declare global` do not
* attach to `globalThis`.
*/
var __ENV__: typeof environment | undefined
}
if (typeof globalThis !== 'undefined') {
globalThis.__ENV__ = environment
}
console.log(
`Brainy running on ${environment.isNode ? 'Node-like runtime' : 'unknown runtime'}`
)
export * from './index.js'

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@ -1,159 +0,0 @@
/**
* Universal Crypto implementation
* Framework-friendly: Trusts that frameworks provide crypto polyfills
* Works in all environments: Browser (via framework), Node.js, Serverless
*/
import { isNode } from '../utils/environment.js'
let nodeCrypto: any = null
// Dynamic import for Node.js crypto (only in Node.js environment)
if (isNode()) {
try {
// Use node: protocol to prevent bundler polyfilling (requires Node 22+)
nodeCrypto = await import('node:crypto')
} catch {
// Ignore import errors in non-Node environments
}
}
/**
* Generate random bytes
* Framework-friendly: Assumes crypto API is available via framework polyfills
*/
export function randomBytes(size: number): Uint8Array {
if (typeof crypto !== 'undefined') {
// Use Web Crypto API (available in browsers via framework polyfills and modern Node.js)
const array = new Uint8Array(size)
crypto.getRandomValues(array)
return array
} else if (nodeCrypto) {
// Use Node.js crypto
return new Uint8Array(nodeCrypto.randomBytes(size))
} else {
throw new Error('Crypto API not available. Framework bundlers should provide crypto polyfills.')
}
}
/**
* Generate random UUID
* Framework-friendly: Assumes crypto.randomUUID is available via framework polyfills
*/
export function randomUUID(): string {
if (typeof crypto !== 'undefined' && crypto.randomUUID) {
return crypto.randomUUID()
} else if (nodeCrypto && nodeCrypto.randomUUID) {
return nodeCrypto.randomUUID()
} else {
throw new Error('crypto.randomUUID not available. Framework bundlers should provide crypto polyfills.')
}
}
/**
* Create hash (simplified interface)
* Framework-friendly: Relies on Node.js crypto or framework-provided implementations
*/
export function createHash(algorithm: string): {
update: (data: string | Uint8Array) => any
digest: (encoding: string) => string
} {
if (nodeCrypto && nodeCrypto.createHash) {
return nodeCrypto.createHash(algorithm)
} else {
throw new Error(`createHash not available. For browser environments, frameworks should provide crypto polyfills or use Web Crypto API directly.`)
}
}
/**
* Create HMAC
* Framework-friendly: Relies on Node.js crypto or framework-provided implementations
*/
export function createHmac(algorithm: string, key: string | Uint8Array): {
update: (data: string | Uint8Array) => any
digest: (encoding: string) => string
} {
if (nodeCrypto && nodeCrypto.createHmac) {
return nodeCrypto.createHmac(algorithm, key)
} else {
throw new Error(`createHmac not available. For browser environments, frameworks should provide crypto polyfills or use Web Crypto API directly.`)
}
}
/**
* PBKDF2 synchronous
* Framework-friendly: Relies on Node.js crypto or framework-provided implementations
*/
export function pbkdf2Sync(password: string | Uint8Array, salt: string | Uint8Array, iterations: number, keylen: number, digest: string): Uint8Array {
if (nodeCrypto && nodeCrypto.pbkdf2Sync) {
return new Uint8Array(nodeCrypto.pbkdf2Sync(password, salt, iterations, keylen, digest))
} else {
throw new Error(`pbkdf2Sync not available. For browser environments, frameworks should provide crypto polyfills or use Web Crypto API directly.`)
}
}
/**
* Scrypt synchronous
* Framework-friendly: Relies on Node.js crypto or framework-provided implementations
*/
export function scryptSync(password: string | Uint8Array, salt: string | Uint8Array, keylen: number, options?: any): Uint8Array {
if (nodeCrypto && nodeCrypto.scryptSync) {
return new Uint8Array(nodeCrypto.scryptSync(password, salt, keylen, options))
} else {
throw new Error(`scryptSync not available. For browser environments, frameworks should provide crypto polyfills or use Web Crypto API directly.`)
}
}
/**
* Create cipher
* Framework-friendly: Relies on Node.js crypto or framework-provided implementations
*/
export function createCipheriv(algorithm: string, key: Uint8Array, iv: Uint8Array): {
update: (data: string, inputEncoding?: string, outputEncoding?: string) => string
final: (outputEncoding?: string) => string
} {
if (nodeCrypto && nodeCrypto.createCipheriv) {
return nodeCrypto.createCipheriv(algorithm, key, iv)
} else {
throw new Error(`createCipheriv not available. For browser environments, frameworks should provide crypto polyfills or use Web Crypto API directly.`)
}
}
/**
* Create decipher
* Framework-friendly: Relies on Node.js crypto or framework-provided implementations
*/
export function createDecipheriv(algorithm: string, key: Uint8Array, iv: Uint8Array): {
update: (data: string, inputEncoding?: string, outputEncoding?: string) => string
final: (outputEncoding?: string) => string
} {
if (nodeCrypto && nodeCrypto.createDecipheriv) {
return nodeCrypto.createDecipheriv(algorithm, key, iv)
} else {
throw new Error(`createDecipheriv not available. For browser environments, frameworks should provide crypto polyfills or use Web Crypto API directly.`)
}
}
/**
* Timing safe equal
* Framework-friendly: Relies on Node.js crypto or framework-provided implementations
*/
export function timingSafeEqual(a: Uint8Array, b: Uint8Array): boolean {
if (nodeCrypto && nodeCrypto.timingSafeEqual) {
return nodeCrypto.timingSafeEqual(a, b)
} else {
throw new Error(`timingSafeEqual not available. For browser environments, frameworks should provide crypto polyfills or use Web Crypto API directly.`)
}
}
export default {
randomBytes,
randomUUID,
createHash,
createHmac,
pbkdf2Sync,
scryptSync,
createCipheriv,
createDecipheriv,
timingSafeEqual
}

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/**
* Bounded Registry with LRU eviction
* Prevents unbounded memory growth in production
*/
export class BoundedRegistry<T> {
private items = new Map<T, number>() // item -> last accessed timestamp
private readonly maxSize: number
constructor(maxSize: number = 10000) {
this.maxSize = maxSize
}
/**
* Add item to registry, evicting oldest if at capacity
*/
add(item: T): void {
// Update timestamp if already exists
if (this.items.has(item)) {
this.items.delete(item) // Remove to re-add at end
this.items.set(item, Date.now())
return
}
// Evict oldest if at capacity
if (this.items.size >= this.maxSize) {
const oldest = this.items.entries().next().value
if (oldest) {
this.items.delete(oldest[0])
}
}
this.items.set(item, Date.now())
}
/**
* Check if item exists
*/
has(item: T): boolean {
return this.items.has(item)
}
/**
* Get all items
*/
getAll(): T[] {
return Array.from(this.items.keys())
}
/**
* Get size
*/
get size(): number {
return this.items.size
}
/**
* Clear all items
*/
clear(): void {
this.items.clear()
}
}

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/**
* Cross-platform crypto utilities
* Provides hashing functions that work in both Node.js and browser environments
*/
/**
* Simple string hash function that works in all environments
* Uses djb2 algorithm - fast and good distribution
* @param str - String to hash
* @returns Positive integer hash
*/
export function hashString(str: string): number {
let hash = 5381
for (let i = 0; i < str.length; i++) {
const char = str.charCodeAt(i)
hash = ((hash << 5) + hash) + char // hash * 33 + char
}
// Ensure positive number
return Math.abs(hash)
}
/**
* Alternative: FNV-1a hash algorithm
* Good distribution and fast
* @param str - String to hash
* @returns Positive integer hash
*/
export function fnv1aHash(str: string): number {
let hash = 2166136261
for (let i = 0; i < str.length; i++) {
hash ^= str.charCodeAt(i)
hash = (hash * 16777619) >>> 0
}
return hash
}
/**
* Generate a deterministic hash for partitioning
* Uses the most appropriate algorithm for the environment
* @param input - Input string to hash
* @returns Positive integer hash suitable for modulo operations
*/
export function getPartitionHash(input: string): number {
// Use djb2 by default as it's fast and has good distribution
// This ensures consistent partitioning across all environments
return hashString(input)
}

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/**
* Dedicated index for tracking soft-deleted items
* This is MUCH more efficient than checking every item in the database
*
* Performance characteristics:
* - Add deleted item: O(1)
* - Remove deleted item: O(1)
* - Check if deleted: O(1)
* - Get all deleted: O(d) where d = number of deleted items << total items
*/
export class DeletedItemsIndex {
private deletedIds: Set<string> = new Set()
private deletedCount: number = 0
/**
* Mark an item as deleted
*/
markDeleted(id: string): void {
if (!this.deletedIds.has(id)) {
this.deletedIds.add(id)
this.deletedCount++
}
}
/**
* Mark an item as not deleted (restored)
*/
markRestored(id: string): void {
if (this.deletedIds.delete(id)) {
this.deletedCount--
}
}
/**
* Check if an item is deleted - O(1)
*/
isDeleted(id: string): boolean {
return this.deletedIds.has(id)
}
/**
* Get all deleted item IDs - O(d)
*/
getAllDeleted(): string[] {
return Array.from(this.deletedIds)
}
/**
* Filter out deleted items from results - O(k) where k = result count
*/
filterDeleted<T extends { id?: string }>(items: T[]): T[] {
if (this.deletedCount === 0) {
// Fast path - no deleted items
return items
}
return items.filter(item => {
const id = item.id
return id ? !this.deletedIds.has(id) : true
})
}
/**
* Get statistics
*/
getStats() {
return {
deletedCount: this.deletedCount,
memoryUsage: this.deletedCount * 100 // Rough estimate: 100 bytes per ID
}
}
/**
* Clear all deleted items (for testing)
*/
clear(): void {
this.deletedIds.clear()
this.deletedCount = 0
}
/**
* Serialize for persistence
*/
serialize(): string {
return JSON.stringify(Array.from(this.deletedIds))
}
/**
* Deserialize from persistence
*/
deserialize(data: string): void {
try {
const ids = JSON.parse(data)
this.deletedIds = new Set(ids)
this.deletedCount = this.deletedIds.size
} catch (e) {
console.warn('Failed to deserialize deleted items index')
}
}
}
/**
* Global singleton for deleted items tracking
*/
export const deletedItemsIndex = new DeletedItemsIndex()

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/**
* Utility to ensure all metadata has the deleted field set properly
* This is CRITICAL for O(1) soft delete filtering performance
*
* Uses _brainy namespace to avoid conflicts with user metadata
*/
const BRAINY_NAMESPACE = '_brainy'
/**
* Ensure metadata has internal Brainy fields set
* @param metadata The metadata object (could be null/undefined)
* @param preserveExisting If true, preserve existing deleted value
* @returns Metadata with internal fields guaranteed
*/
export function ensureDeletedField(metadata: any, preserveExisting: boolean = true): any {
// Handle null/undefined metadata
if (!metadata) {
return {
[BRAINY_NAMESPACE]: {
deleted: false,
version: 1
}
}
}
// Clone to avoid mutation
const result = { ...metadata }
// Ensure _brainy namespace exists
if (!result[BRAINY_NAMESPACE]) {
result[BRAINY_NAMESPACE] = {}
}
// Set deleted field if not present
if (!('deleted' in result[BRAINY_NAMESPACE])) {
result[BRAINY_NAMESPACE].deleted = false
} else if (!preserveExisting) {
// Force to false if not preserving
result[BRAINY_NAMESPACE].deleted = false
}
return result
}
/**
* Mark an item as soft deleted
* @param metadata The metadata object
* @returns Metadata with _brainy.deleted=true
*/
export function markAsDeleted(metadata: any): any {
const result = ensureDeletedField(metadata)
result[BRAINY_NAMESPACE].deleted = true
return result
}
/**
* Mark an item as restored (not deleted)
* @param metadata The metadata object
* @returns Metadata with _brainy.deleted=false
*/
export function markAsRestored(metadata: any): any {
const result = ensureDeletedField(metadata)
result[BRAINY_NAMESPACE].deleted = false
return result
}
/**
* Check if an item is deleted
* @param metadata The metadata object
* @returns true if deleted, false otherwise (including if field missing)
*/
export function isDeleted(metadata: any): boolean {
return metadata?.[BRAINY_NAMESPACE]?.deleted === true
}
/**
* Check if an item is active (not deleted)
* @param metadata The metadata object
* @returns true if not deleted (default), false if deleted
*/
export function isActive(metadata: any): boolean {
// If no deleted field or deleted=false, item is active
return !isDeleted(metadata)
}
// Export the namespace constant for use in queries
export const BRAINY_DELETED_FIELD = `${BRAINY_NAMESPACE}.deleted`

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/**
* Clean Metadata Architecture for Brainy 2.2
* No backward compatibility - doing it RIGHT from the start!
*/
// Namespace constants
export const BRAINY_NS = '_brainy' as const
export const AUG_NS = '_augmentations' as const
export const AUDIT_NS = '_audit' as const
// Field paths for O(1) indexing
export const DELETED_FIELD = `${BRAINY_NS}.deleted` as const
export const INDEXED_FIELD = `${BRAINY_NS}.indexed` as const
export const VERSION_FIELD = `${BRAINY_NS}.version` as const
/**
* Internal Brainy metadata structure
* These fields are ALWAYS present and indexed for O(1) access
*/
export interface BrainyInternalMetadata {
deleted: boolean // ALWAYS boolean, enables O(1) soft delete
indexed: boolean // Whether in search index
version: number // Schema version
created: number // Unix timestamp
updated: number // Unix timestamp
// Optional internal fields
domain?: string // Domain classification
priority?: number // Query priority hint
ttl?: number // Time to live
}
/**
* Complete metadata structure with namespaces
*/
export interface NamespacedMetadata<T = any> {
// User metadata - any fields they want
[key: string]: any
// Internal metadata - our fields
[BRAINY_NS]: BrainyInternalMetadata
// Augmentation metadata - isolated per augmentation
[AUG_NS]?: {
[augmentationName: string]: any
}
// Audit trail - optional
[AUDIT_NS]?: Array<{
timestamp: number
augmentation: string
field: string
oldValue: any
newValue: any
}>
}
/**
* Create properly namespaced metadata
* This is called for EVERY noun/verb creation
*/
export function createNamespacedMetadata<T = any>(
userMetadata?: T
): NamespacedMetadata<T> {
const now = Date.now()
// Start with user metadata or empty object
const result: any = userMetadata ? { ...userMetadata } : {}
// ALWAYS add internal namespace with required fields
result[BRAINY_NS] = {
deleted: false, // CRITICAL: Always false for new items
indexed: true, // New items are indexed
version: 1, // Current schema version
created: now,
updated: now
}
return result
}
/**
* Update metadata while preserving namespaces
*/
export function updateNamespacedMetadata<T = any>(
existing: NamespacedMetadata<T>,
updates: Partial<T>
): NamespacedMetadata<T> {
const now = Date.now()
// Merge user fields
const result: any = {
...existing,
...updates
}
// Preserve internal namespace but update timestamp
result[BRAINY_NS] = {
...existing[BRAINY_NS],
updated: now
}
// Preserve augmentation namespace
if (existing[AUG_NS]) {
result[AUG_NS] = existing[AUG_NS]
}
// Preserve audit trail
if (existing[AUDIT_NS]) {
result[AUDIT_NS] = existing[AUDIT_NS]
}
return result
}
/**
* Soft delete a noun (O(1) operation)
*/
export function markDeleted<T = any>(
metadata: NamespacedMetadata<T>
): NamespacedMetadata<T> {
return {
...metadata,
[BRAINY_NS]: {
...metadata[BRAINY_NS],
deleted: true,
updated: Date.now()
}
}
}
/**
* Restore a soft-deleted noun (O(1) operation)
*/
export function markRestored<T = any>(
metadata: NamespacedMetadata<T>
): NamespacedMetadata<T> {
return {
...metadata,
[BRAINY_NS]: {
...metadata[BRAINY_NS],
deleted: false,
updated: Date.now()
}
}
}
/**
* Check if a noun is deleted (O(1) check)
*/
export function isDeleted<T = any>(
metadata: NamespacedMetadata<T>
): boolean {
return metadata[BRAINY_NS]?.deleted === true
}
/**
* Get user metadata without internal fields
* Used by augmentations to get clean user data
*/
export function getUserMetadata<T = any>(
metadata: NamespacedMetadata<T>
): T {
const { [BRAINY_NS]: _, [AUG_NS]: __, [AUDIT_NS]: ___, ...userMeta } = metadata
return userMeta as T
}
/**
* Set augmentation data in isolated namespace
*/
export function setAugmentationData<T = any>(
metadata: NamespacedMetadata<T>,
augmentationName: string,
data: any
): NamespacedMetadata<T> {
const result = { ...metadata }
if (!result[AUG_NS]) {
result[AUG_NS] = {}
}
result[AUG_NS][augmentationName] = data
return result
}
/**
* Add audit entry for tracking
*/
export function addAuditEntry<T = any>(
metadata: NamespacedMetadata<T>,
entry: {
augmentation: string
field: string
oldValue: any
newValue: any
}
): NamespacedMetadata<T> {
const result = { ...metadata }
if (!result[AUDIT_NS]) {
result[AUDIT_NS] = []
}
result[AUDIT_NS].push({
...entry,
timestamp: Date.now()
})
return result
}
/**
* INDEXING EXPLANATION:
*
* The MetadataIndex flattens nested objects into dot-notation keys:
*
* Input metadata:
* {
* name: "Django",
* _brainy: {
* deleted: false,
* indexed: true
* }
* }
*
* Creates index entries:
* - "name" -> "django" -> Set([id1, id2...])
* - "_brainy.deleted" -> "false" -> Set([id1, id2...]) // O(1) lookup!
* - "_brainy.indexed" -> "true" -> Set([id1, id2...])
*
* Query: { "_brainy.deleted": false }
* Lookup: index["_brainy.deleted"]["false"] -> Set of IDs in O(1)
*
* This is why namespacing doesn't hurt performance - it's all flattened!
*/
/**
* Fields that should ALWAYS be indexed for O(1) access
*/
export const ALWAYS_INDEXED_FIELDS = [
DELETED_FIELD, // For soft delete filtering
INDEXED_FIELD, // For index management
VERSION_FIELD // For schema versioning
]
/**
* Fields that should use sorted index for O(log n) range queries
*/
export const SORTED_INDEX_FIELDS = [
`${BRAINY_NS}.created`,
`${BRAINY_NS}.updated`,
`${BRAINY_NS}.priority`,
`${BRAINY_NS}.ttl`
]

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/**
* Enhanced Structured Logging System for Brainy
* Provides production-ready logging with structured output, context preservation,
* performance tracking, and multiple transport support
*/
import { performance } from 'perf_hooks'
import { randomUUID } from '../universal/crypto.js'
export enum LogLevel {
SILENT = -1,
FATAL = 0,
ERROR = 1,
WARN = 2,
INFO = 3,
DEBUG = 4,
TRACE = 5
}
export interface LogContext {
requestId?: string
userId?: string
operation?: string
entityId?: string
entityType?: string
[key: string]: any
}
export interface LogEntry {
timestamp: string
level: string
levelNumeric: number
module: string
message: string
context?: LogContext
data?: any
error?: {
name: string
message: string
stack?: string
code?: string
}
performance?: {
duration?: number
memory?: {
used: number
total: number
}
}
host?: string
pid: number
version?: string
}
export interface LogTransport {
name: string
log(entry: LogEntry): void | Promise<void>
flush?(): Promise<void>
}
export interface StructuredLoggerConfig {
level: LogLevel
modules?: Record<string, LogLevel>
format: 'json' | 'pretty' | 'simple'
transports: LogTransport[]
context?: LogContext
includeHost?: boolean
includeMemory?: boolean
bufferSize?: number
flushInterval?: number
version?: string
}
class ConsoleTransport implements LogTransport {
name = 'console'
private format: 'json' | 'pretty' | 'simple'
constructor(format: 'json' | 'pretty' | 'simple' = 'json') {
this.format = format
}
log(entry: LogEntry): void {
const method = this.getConsoleMethod(entry.levelNumeric)
if (this.format === 'json') {
method(JSON.stringify(entry))
} else if (this.format === 'pretty') {
const color = this.getColor(entry.levelNumeric)
const prefix = `${entry.timestamp} ${color}[${entry.level}]\\x1b[0m [${entry.module}]`
const message = entry.message
if (entry.error) {
method(`${prefix} ${message}`, entry.error)
} else if (entry.data) {
method(`${prefix} ${message}`, entry.data)
} else {
method(`${prefix} ${message}`)
}
} else {
// Simple format
method(`[${entry.level}] ${entry.message}`)
}
}
private getConsoleMethod(level: number): (...args: any[]) => void {
switch (level) {
case LogLevel.FATAL:
case LogLevel.ERROR:
return console.error
case LogLevel.WARN:
return console.warn
case LogLevel.INFO:
return console.info
default:
return console.log
}
}
private getColor(level: number): string {
switch (level) {
case LogLevel.FATAL:
return '\\x1b[35m' // Magenta
case LogLevel.ERROR:
return '\\x1b[31m' // Red
case LogLevel.WARN:
return '\\x1b[33m' // Yellow
case LogLevel.INFO:
return '\\x1b[36m' // Cyan
case LogLevel.DEBUG:
return '\\x1b[32m' // Green
case LogLevel.TRACE:
return '\\x1b[90m' // Gray
default:
return '\\x1b[0m' // Reset
}
}
}
class BufferedTransport implements LogTransport {
name = 'buffered'
private buffer: LogEntry[] = []
private innerTransport: LogTransport
private bufferSize: number
private flushTimer?: NodeJS.Timeout
constructor(innerTransport: LogTransport, bufferSize: number = 100, flushInterval: number = 5000) {
this.innerTransport = innerTransport
this.bufferSize = bufferSize
if (flushInterval > 0) {
this.flushTimer = setInterval(() => this.flush(), flushInterval)
}
}
log(entry: LogEntry): void {
this.buffer.push(entry)
if (this.buffer.length >= this.bufferSize) {
this.flush()
}
}
async flush(): Promise<void> {
const entries = this.buffer.splice(0)
for (const entry of entries) {
await this.innerTransport.log(entry)
}
if (this.innerTransport.flush) {
await this.innerTransport.flush()
}
}
destroy(): void {
if (this.flushTimer) {
clearInterval(this.flushTimer)
}
this.flush()
}
}
export class StructuredLogger {
private static instance: StructuredLogger
private config: StructuredLoggerConfig
private defaultContext: LogContext = {}
private performanceMarks = new Map<string, number>()
private constructor() {
const isDevelopment = process.env.NODE_ENV !== 'production'
const format = isDevelopment ? 'pretty' : 'json'
this.config = {
level: isDevelopment ? LogLevel.DEBUG : LogLevel.INFO,
format,
transports: [new ConsoleTransport(format)],
includeHost: !isDevelopment,
includeMemory: false,
bufferSize: 100,
flushInterval: 5000,
version: process.env.npm_package_version
}
// Load from environment
this.loadEnvironmentConfig()
}
private loadEnvironmentConfig(): void {
const envLevel = process.env.BRAINY_LOG_LEVEL
if (envLevel) {
const level = LogLevel[envLevel.toUpperCase() as keyof typeof LogLevel]
if (level !== undefined) {
this.config.level = level
}
}
const envFormat = process.env.BRAINY_LOG_FORMAT
if (envFormat && ['json', 'pretty', 'simple'].includes(envFormat)) {
this.config.format = envFormat as 'json' | 'pretty' | 'simple'
}
const moduleConfig = process.env.BRAINY_MODULE_LOG_LEVELS
if (moduleConfig) {
try {
this.config.modules = JSON.parse(moduleConfig)
} catch {
// Ignore parse errors
}
}
}
static getInstance(): StructuredLogger {
if (!StructuredLogger.instance) {
StructuredLogger.instance = new StructuredLogger()
}
return StructuredLogger.instance
}
configure(config: Partial<StructuredLoggerConfig>): void {
this.config = { ...this.config, ...config }
}
setContext(context: LogContext): void {
this.defaultContext = { ...this.defaultContext, ...context }
}
clearContext(): void {
this.defaultContext = {}
}
withContext(context: LogContext): StructuredLogger {
const contextualLogger = Object.create(this)
contextualLogger.defaultContext = { ...this.defaultContext, ...context }
return contextualLogger
}
startTimer(label: string): void {
this.performanceMarks.set(label, performance.now())
}
endTimer(label: string): number | undefined {
const start = this.performanceMarks.get(label)
if (start === undefined) return undefined
const duration = performance.now() - start
this.performanceMarks.delete(label)
return duration
}
private shouldLog(level: LogLevel, module: string): boolean {
if (this.config.modules?.[module] !== undefined) {
return level <= this.config.modules[module]
}
return level <= this.config.level
}
private createLogEntry(
level: LogLevel,
module: string,
message: string,
context?: LogContext,
data?: any,
error?: Error
): LogEntry {
const entry: LogEntry = {
timestamp: new Date().toISOString(),
level: LogLevel[level],
levelNumeric: level,
module,
message,
pid: process.pid,
version: this.config.version
}
// Merge contexts
const mergedContext = { ...this.defaultContext, ...context }
if (Object.keys(mergedContext).length > 0) {
entry.context = mergedContext
}
if (data !== undefined) {
entry.data = data
}
if (error) {
entry.error = {
name: error.name,
message: error.message,
stack: error.stack,
code: (error as Error & { code?: string }).code
}
}
if (this.config.includeHost) {
try {
const os = require('node:os')
entry.host = os.hostname()
} catch {
entry.host = 'unknown'
}
}
if (this.config.includeMemory && typeof process !== 'undefined' && process.memoryUsage) {
const mem = process.memoryUsage()
entry.performance = {
memory: {
used: Math.round(mem.heapUsed / 1024 / 1024),
total: Math.round(mem.heapTotal / 1024 / 1024)
}
}
}
return entry
}
private log(
level: LogLevel,
module: string,
message: string,
contextOrData?: LogContext | any,
data?: any
): void {
if (!this.shouldLog(level, module)) {
return
}
// Handle overloaded parameters
let context: LogContext | undefined
let logData: any
if (contextOrData && typeof contextOrData === 'object' && !Array.isArray(contextOrData)) {
// Check if it looks like a context object
const hasContextKeys = ['requestId', 'userId', 'operation', 'entityId', 'entityType']
.some(key => key in contextOrData)
if (hasContextKeys) {
context = contextOrData
logData = data
} else {
logData = contextOrData
}
} else {
logData = contextOrData
}
// Extract error if present
let error: Error | undefined
if (logData instanceof Error) {
error = logData
logData = undefined
} else if (logData?.error instanceof Error) {
error = logData.error
delete logData.error
}
const entry = this.createLogEntry(level, module, message, context, logData, error)
// Send to all transports
for (const transport of this.config.transports) {
try {
transport.log(entry)
} catch (err) {
// Fallback to console.error if transport fails
console.error('Logger transport error:', err)
}
}
}
fatal(module: string, message: string, contextOrData?: LogContext | any, data?: any): void {
this.log(LogLevel.FATAL, module, message, contextOrData, data)
}
error(module: string, message: string, contextOrData?: LogContext | any, data?: any): void {
this.log(LogLevel.ERROR, module, message, contextOrData, data)
}
warn(module: string, message: string, contextOrData?: LogContext | any, data?: any): void {
this.log(LogLevel.WARN, module, message, contextOrData, data)
}
info(module: string, message: string, contextOrData?: LogContext | any, data?: any): void {
this.log(LogLevel.INFO, module, message, contextOrData, data)
}
debug(module: string, message: string, contextOrData?: LogContext | any, data?: any): void {
this.log(LogLevel.DEBUG, module, message, contextOrData, data)
}
trace(module: string, message: string, contextOrData?: LogContext | any, data?: any): void {
this.log(LogLevel.TRACE, module, message, contextOrData, data)
}
createModuleLogger(module: string) {
const self = this
return {
fatal: (message: string, contextOrData?: LogContext | any, data?: any) =>
self.fatal(module, message, contextOrData, data),
error: (message: string, contextOrData?: LogContext | any, data?: any) =>
self.error(module, message, contextOrData, data),
warn: (message: string, contextOrData?: LogContext | any, data?: any) =>
self.warn(module, message, contextOrData, data),
info: (message: string, contextOrData?: LogContext | any, data?: any) =>
self.info(module, message, contextOrData, data),
debug: (message: string, contextOrData?: LogContext | any, data?: any) =>
self.debug(module, message, contextOrData, data),
trace: (message: string, contextOrData?: LogContext | any, data?: any) =>
self.trace(module, message, contextOrData, data),
withContext: (context: LogContext) => {
const contextual = self.withContext(context)
return contextual.createModuleLogger(module)
},
startTimer: (label: string) => self.startTimer(`${module}:${label}`),
endTimer: (label: string) => self.endTimer(`${module}:${label}`)
}
}
async flush(): Promise<void> {
const flushPromises = this.config.transports
.filter(t => t.flush)
.map(t => t.flush!())
await Promise.all(flushPromises)
}
addTransport(transport: LogTransport): void {
this.config.transports.push(transport)
}
removeTransport(name: string): void {
this.config.transports = this.config.transports.filter(t => t.name !== name)
}
child(context: LogContext): StructuredLogger {
return this.withContext(context)
}
}
// Singleton instance
export const structuredLogger = StructuredLogger.getInstance()
// Convenience functions
export function createModuleLogger(module: string) {
return structuredLogger.createModuleLogger(module)
}
export function setLogContext(context: LogContext) {
structuredLogger.setContext(context)
}
export function withLogContext(context: LogContext) {
return structuredLogger.withContext(context)
}
// Correlation ID middleware helper
export function createCorrelationId(): string {
return randomUUID()
}
// Performance logging helper
export function logPerformance(
logger: ReturnType<typeof createModuleLogger>,
operation: string,
fn: () => any
): any {
logger.startTimer(operation)
try {
const result = fn()
if (result && typeof result.then === 'function') {
return result.finally(() => {
const duration = logger.endTimer(operation)
logger.debug(`${operation} completed`, { duration })
})
}
const duration = logger.endTimer(operation)
logger.debug(`${operation} completed`, { duration })
return result
} catch (error) {
const duration = logger.endTimer(operation)
logger.error(`${operation} failed`, { duration, error })
throw error
}
}
// Backward compatibility wrapper for existing logger
export class LoggerCompatibilityWrapper {
private moduleLogger: ReturnType<typeof createModuleLogger>
constructor(module: string = 'legacy') {
this.moduleLogger = createModuleLogger(module)
}
error(module: string, message: string, ...args: any[]): void {
this.moduleLogger.error(message, { module, data: args })
}
warn(module: string, message: string, ...args: any[]): void {
this.moduleLogger.warn(message, { module, data: args })
}
info(module: string, message: string, ...args: any[]): void {
this.moduleLogger.info(message, { module, data: args })
}
debug(module: string, message: string, ...args: any[]): void {
this.moduleLogger.debug(message, { module, data: args })
}
trace(module: string, message: string, ...args: any[]): void {
this.moduleLogger.trace(message, { module, data: args })
}
createModuleLogger(module: string) {
const logger = createModuleLogger(module)
return {
error: (message: string, ...args: any[]) => logger.error(message, { data: args }),
warn: (message: string, ...args: any[]) => logger.warn(message, { data: args }),
info: (message: string, ...args: any[]) => logger.info(message, { data: args }),
debug: (message: string, ...args: any[]) => logger.debug(message, { data: args }),
trace: (message: string, ...args: any[]) => logger.trace(message, { data: args })
}
}
}
// Export types for external use
export type ModuleLogger = ReturnType<typeof createModuleLogger>
// Types are already exported above, no need to re-export

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/**
* Write Buffer
* Accumulates writes and flushes them in bulk to reduce S3 operations
* Implements intelligent deduplication and compression
*/
import { HNSWNoun, HNSWVerb } from '../coreTypes.js'
import { createModuleLogger } from './logger.js'
import { getGlobalBackpressure } from './adaptiveBackpressure.js'
interface BufferedWrite<T> {
id: string
data: T
timestamp: number
type: 'noun' | 'verb' | 'metadata'
retryCount: number
}
interface FlushResult {
successful: number
failed: number
duration: number
}
/**
* High-performance write buffer for bulk operations
*/
export class WriteBuffer<T> {
private logger = createModuleLogger('WriteBuffer')
// Buffer storage
private buffer = new Map<string, BufferedWrite<T>>()
// Configuration - More aggressive for high volume
private maxBufferSize = 2000 // Allow larger buffers
private flushInterval = 500 // Flush more frequently (0.5 seconds)
private minFlushSize = 50 // Lower minimum to flush sooner
private maxRetries = 3 // Maximum retry attempts
// State
private flushTimer: NodeJS.Timeout | null = null
private isFlushing = false
private lastFlush = Date.now()
private pendingFlush: Promise<FlushResult> | null = null
// Statistics
private totalWrites = 0
private totalFlushes = 0
private failedWrites = 0
private duplicatesRemoved = 0
// Write function
private writeFunction: (items: Map<string, T>) => Promise<void>
private type: 'noun' | 'verb' | 'metadata'
// Backpressure integration
private backpressure = getGlobalBackpressure()
constructor(
type: 'noun' | 'verb' | 'metadata',
writeFunction: (items: Map<string, T>) => Promise<void>,
options?: {
maxBufferSize?: number
flushInterval?: number
minFlushSize?: number
}
) {
this.type = type
this.writeFunction = writeFunction
if (options) {
this.maxBufferSize = options.maxBufferSize || this.maxBufferSize
this.flushInterval = options.flushInterval || this.flushInterval
this.minFlushSize = options.minFlushSize || this.minFlushSize
}
// Start periodic flush
this.startPeriodicFlush()
}
/**
* Add item to buffer
*/
public async add(id: string, data: T): Promise<void> {
// Check if we're already at capacity
if (this.buffer.size >= this.maxBufferSize) {
// Wait for current flush to complete
if (this.pendingFlush) {
await this.pendingFlush
}
// Force flush if still at capacity
if (this.buffer.size >= this.maxBufferSize) {
await this.flush('capacity')
}
}
// Check for duplicate and update if newer
const existing = this.buffer.get(id)
if (existing) {
// Update with newer data
existing.data = data
existing.timestamp = Date.now()
this.duplicatesRemoved++
} else {
// Add new item
this.buffer.set(id, {
id,
data,
timestamp: Date.now(),
type: this.type,
retryCount: 0
})
}
this.totalWrites++
// Log buffer growth periodically
if (this.totalWrites % 100 === 0) {
this.logger.info(`📈 BUFFER GROWTH: ${this.buffer.size} ${this.type} items buffered (${this.totalWrites} total writes, ${this.duplicatesRemoved} deduplicated)`)
}
// Check if we should flush
this.checkFlush()
}
/**
* Check if we should flush
*/
private checkFlush(): void {
const bufferSize = this.buffer.size
const timeSinceFlush = Date.now() - this.lastFlush
// Immediate flush conditions
if (bufferSize >= this.maxBufferSize) {
this.flush('size')
return
}
// Time-based flush with minimum size
if (timeSinceFlush >= this.flushInterval && bufferSize >= this.minFlushSize) {
this.flush('time')
return
}
// Adaptive flush based on system load
const backpressureStatus = this.backpressure.getStatus()
if (backpressureStatus.queueLength > 1000 && bufferSize > 10) {
// System under pressure - flush smaller batches more frequently
this.flush('pressure')
}
}
/**
* Flush buffer to storage
*/
public async flush(reason: string = 'manual'): Promise<FlushResult> {
// Prevent concurrent flushes
if (this.isFlushing) {
if (this.pendingFlush) {
return this.pendingFlush
}
return { successful: 0, failed: 0, duration: 0 }
}
// Nothing to flush
if (this.buffer.size === 0) {
return { successful: 0, failed: 0, duration: 0 }
}
this.isFlushing = true
const startTime = Date.now()
// Create flush promise
this.pendingFlush = this.doFlush(reason, startTime)
try {
const result = await this.pendingFlush
return result
} finally {
this.isFlushing = false
this.pendingFlush = null
}
}
/**
* Perform the actual flush
*/
private async doFlush(reason: string, startTime: number): Promise<FlushResult> {
const itemsToFlush = new Map<string, T>()
const flushingItems = new Map<string, BufferedWrite<T>>()
// Take items from buffer
let count = 0
for (const [id, item] of this.buffer.entries()) {
itemsToFlush.set(id, item.data)
flushingItems.set(id, item)
count++
// Limit batch size for better performance
if (count >= 500) {
break
}
}
// Remove from buffer
for (const id of itemsToFlush.keys()) {
this.buffer.delete(id)
}
this.logger.warn(`🔄 BUFFERING: Flushing ${itemsToFlush.size} ${this.type} items (buffer had ${this.buffer.size + itemsToFlush.size}) - reason: ${reason}`)
try {
// Request permission from backpressure system
const opId = `flush-${Date.now()}`
await this.backpressure.requestPermission(opId, 2) // Higher priority
try {
// Perform bulk write
await this.writeFunction(itemsToFlush)
// Success
this.backpressure.releasePermission(opId, true)
this.totalFlushes++
this.lastFlush = Date.now()
const duration = Date.now() - startTime
this.logger.warn(`🚀 BATCH FLUSH: ${itemsToFlush.size} ${this.type} items → 1 bulk S3 operation (${duration}ms, reason: ${reason})`)
return {
successful: itemsToFlush.size,
failed: 0,
duration
}
} catch (error) {
// Release with error
this.backpressure.releasePermission(opId, false)
throw error
}
} catch (error) {
this.logger.error(`Flush failed: ${error}`)
// Put items back with retry count
for (const [id, item] of flushingItems.entries()) {
item.retryCount++
if (item.retryCount < this.maxRetries) {
// Put back for retry
this.buffer.set(id, item)
} else {
// Max retries exceeded
this.failedWrites++
this.logger.error(`Max retries exceeded for ${this.type} ${id}`)
}
}
const duration = Date.now() - startTime
return {
successful: 0,
failed: itemsToFlush.size,
duration
}
}
}
/**
* Start periodic flush timer
*/
private startPeriodicFlush(): void {
if (this.flushTimer) {
return
}
this.flushTimer = setInterval(() => {
if (this.buffer.size > 0) {
const timeSinceFlush = Date.now() - this.lastFlush
// Flush if we have items and enough time has passed
if (timeSinceFlush >= this.flushInterval) {
this.flush('periodic').catch(error => {
this.logger.error('Periodic flush failed:', error)
})
}
}
}, Math.min(100, this.flushInterval / 2))
}
/**
* Stop periodic flush timer
*/
public stop(): void {
if (this.flushTimer) {
clearInterval(this.flushTimer)
this.flushTimer = null
}
}
/**
* Force flush all pending writes
*/
public async forceFlush(): Promise<FlushResult> {
// Flush everything regardless of size
const oldMinSize = this.minFlushSize
this.minFlushSize = 0
try {
const result = await this.flush('force')
// Flush any remaining items
while (this.buffer.size > 0) {
const additionalResult = await this.flush('force-remaining')
result.successful += additionalResult.successful
result.failed += additionalResult.failed
result.duration += additionalResult.duration
}
return result
} finally {
this.minFlushSize = oldMinSize
}
}
/**
* Get buffer statistics
*/
public getStats(): {
bufferSize: number
totalWrites: number
totalFlushes: number
failedWrites: number
duplicatesRemoved: number
avgFlushSize: number
} {
return {
bufferSize: this.buffer.size,
totalWrites: this.totalWrites,
totalFlushes: this.totalFlushes,
failedWrites: this.failedWrites,
duplicatesRemoved: this.duplicatesRemoved,
avgFlushSize: this.totalFlushes > 0 ? this.totalWrites / this.totalFlushes : 0
}
}
/**
* Adjust parameters based on load
*/
public adjustForLoad(pendingRequests: number): void {
if (pendingRequests > 10000) {
// Extreme load - buffer more aggressively
this.maxBufferSize = 5000
this.flushInterval = 500
this.minFlushSize = 500
} else if (pendingRequests > 1000) {
// High load
this.maxBufferSize = 2000
this.flushInterval = 1000
this.minFlushSize = 200
} else if (pendingRequests > 100) {
// Moderate load
this.maxBufferSize = 1000
this.flushInterval = 2000
this.minFlushSize = 100
} else {
// Low load - optimize for latency
this.maxBufferSize = 500
this.flushInterval = 5000
this.minFlushSize = 50
}
}
}
// Global write buffers
const writeBuffers = new Map<string, WriteBuffer<any>>()
/**
* Get or create a write buffer
*/
export function getWriteBuffer<T>(
id: string,
type: 'noun' | 'verb' | 'metadata',
writeFunction: (items: Map<string, T>) => Promise<void>
): WriteBuffer<T> {
if (!writeBuffers.has(id)) {
writeBuffers.set(id, new WriteBuffer<T>(type, writeFunction))
}
return writeBuffers.get(id)!
}
/**
* Flush all write buffers
*/
export async function flushAllBuffers(): Promise<void> {
const promises: Promise<FlushResult>[] = []
for (const buffer of writeBuffers.values()) {
promises.push(buffer.forceFlush())
}
await Promise.all(promises)
}
/**
* Clear all write buffers
*/
export function clearWriteBuffers(): void {
for (const buffer of writeBuffers.values()) {
buffer.stop()
}
writeBuffers.clear()
}

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/**
* fs-Compatible Interface for VFS
*
* Provides a drop-in replacement for Node's fs module
* that uses VFS for storage instead of the real filesystem.
*
* Usage:
* import { FSCompat } from '@soulcraft/brainy/vfs'
* const fs = new FSCompat(brain.vfs)
*
* // Now use like Node's fs
* await fs.promises.readFile('/path')
* fs.createReadStream('/path').pipe(output)
*/
import { VirtualFileSystem } from './VirtualFileSystem.js'
import type {
ReadOptions,
WriteOptions,
MkdirOptions,
VFSStats,
VFSDirent
} from './types.js'
export class FSCompat {
/**
* Promise-based API (like fs.promises)
*/
public readonly promises: FSPromises
constructor(private vfs: VirtualFileSystem) {
this.promises = new FSPromises(vfs)
}
// ============= Callback-style methods (for compatibility) =============
readFile(path: string, callback: (err: Error | null, data?: Buffer) => void): void
readFile(path: string, encoding: BufferEncoding, callback: (err: Error | null, data?: string) => void): void
readFile(path: string, options: any, callback?: any): void {
if (typeof options === 'function') {
callback = options
options = {}
}
this.vfs.readFile(path, options)
.then(data => {
if (options?.encoding) {
callback(null, data.toString(options.encoding))
} else {
callback(null, data)
}
})
.catch(err => callback(err))
}
writeFile(path: string, data: Buffer | string, callback: (err: Error | null) => void): void
writeFile(path: string, data: Buffer | string, options: any, callback?: any): void {
if (typeof options === 'function') {
callback = options
options = {}
}
const buffer = Buffer.isBuffer(data) ? data : Buffer.from(data, options?.encoding || 'utf8')
this.vfs.writeFile(path, buffer, options)
.then(() => callback(null))
.catch(err => callback(err))
}
mkdir(path: string, callback: (err: Error | null) => void): void
mkdir(path: string, options: any, callback?: any): void {
if (typeof options === 'function') {
callback = options
options = {}
}
this.vfs.mkdir(path, options)
.then(() => callback(null))
.catch(err => callback(err))
}
rmdir(path: string, callback: (err: Error | null) => void): void
rmdir(path: string, options: any, callback?: any): void {
if (typeof options === 'function') {
callback = options
options = {}
}
this.vfs.rmdir(path, options)
.then(() => callback(null))
.catch(err => callback(err))
}
readdir(path: string, callback: (err: Error | null, files?: string[]) => void): void
readdir(path: string, options: any, callback?: any): void {
if (typeof options === 'function') {
callback = options
options = {}
}
this.vfs.readdir(path, options)
.then(files => callback(null, files))
.catch(err => callback(err))
}
stat(path: string, callback: (err: Error | null, stats?: VFSStats) => void): void {
this.vfs.stat(path)
.then(stats => callback(null, stats))
.catch(err => callback(err))
}
lstat(path: string, callback: (err: Error | null, stats?: VFSStats) => void): void {
this.vfs.lstat(path)
.then(stats => callback(null, stats))
.catch(err => callback(err))
}
unlink(path: string, callback: (err: Error | null) => void): void {
this.vfs.unlink(path)
.then(() => callback(null))
.catch(err => callback(err))
}
rename(oldPath: string, newPath: string, callback: (err: Error | null) => void): void {
this.vfs.rename(oldPath, newPath)
.then(() => callback(null))
.catch(err => callback(err))
}
copyFile(src: string, dest: string, callback: (err: Error | null) => void): void
copyFile(src: string, dest: string, flags: number, callback: (err: Error | null) => void): void
copyFile(src: string, dest: string, flagsOrCallback: any, callback?: any): void {
if (typeof flagsOrCallback === 'function') {
callback = flagsOrCallback
} else {
// flags provided but not used
}
this.vfs.copy(src, dest)
.then(() => callback(null))
.catch(err => callback(err))
}
exists(path: string, callback: (exists: boolean) => void): void {
this.vfs.exists(path)
.then(exists => callback(exists))
.catch(() => callback(false))
}
access(path: string, callback: (err: Error | null) => void): void
access(path: string, mode: number, callback: (err: Error | null) => void): void
access(path: string, modeOrCallback: any, callback?: any): void {
if (typeof modeOrCallback === 'function') {
callback = modeOrCallback
} else {
// mode provided but not used
}
this.vfs.exists(path)
.then(exists => {
if (exists) {
callback(null)
} else {
const err: any = new Error('ENOENT: no such file or directory')
err.code = 'ENOENT'
callback(err)
}
})
.catch(err => callback(err))
}
appendFile(path: string, data: Buffer | string, callback: (err: Error | null) => void): void
appendFile(path: string, data: Buffer | string, options: any, callback?: any): void {
if (typeof options === 'function') {
callback = options
options = {}
}
const buffer = Buffer.isBuffer(data) ? data : Buffer.from(data, options?.encoding || 'utf8')
this.vfs.appendFile(path, buffer, options)
.then(() => callback(null))
.catch(err => callback(err))
}
// ============= Stream methods =============
createReadStream(path: string, options?: any) {
return this.vfs.createReadStream(path, options)
}
createWriteStream(path: string, options?: any) {
return this.vfs.createWriteStream(path, options)
}
// ============= Watch methods =============
watch(path: string, listener?: any) {
return this.vfs.watch(path, listener)
}
watchFile(path: string, listener: any) {
return this.vfs.watchFile(path, listener)
}
unwatchFile(path: string) {
return this.vfs.unwatchFile(path)
}
// ============= Additional methods =============
/**
* Import a directory from real filesystem (VFS extension)
*/
async importDirectory(sourcePath: string, options?: any) {
return this.vfs.importDirectory(sourcePath, options)
}
/**
* Search files semantically (VFS extension)
*/
async search(query: string, options?: any) {
return this.vfs.search(query, options)
}
}
/**
* Promise-based fs API (like fs.promises)
*/
class FSPromises {
constructor(private vfs: VirtualFileSystem) {}
async readFile(path: string, options?: any): Promise<Buffer | string> {
const buffer = await this.vfs.readFile(path, options)
if (options?.encoding) {
return buffer.toString(options.encoding)
}
return buffer
}
async writeFile(path: string, data: Buffer | string, options?: any): Promise<void> {
const buffer = Buffer.isBuffer(data) ? data : Buffer.from(data, options?.encoding || 'utf8')
return this.vfs.writeFile(path, buffer, options)
}
async mkdir(path: string, options?: any): Promise<void> {
return this.vfs.mkdir(path, options)
}
async rmdir(path: string, options?: any): Promise<void> {
return this.vfs.rmdir(path, options)
}
async readdir(path: string, options?: any): Promise<string[] | VFSDirent[]> {
return this.vfs.readdir(path, options)
}
async stat(path: string): Promise<VFSStats> {
return this.vfs.stat(path)
}
async lstat(path: string): Promise<VFSStats> {
return this.vfs.lstat(path)
}
async unlink(path: string): Promise<void> {
return this.vfs.unlink(path)
}
async rename(oldPath: string, newPath: string): Promise<void> {
return this.vfs.rename(oldPath, newPath)
}
async copyFile(src: string, dest: string, flags?: number): Promise<void> {
return this.vfs.copy(src, dest)
}
async access(path: string, mode?: number): Promise<void> {
const exists = await this.vfs.exists(path)
if (!exists) {
const err: any = new Error('ENOENT: no such file or directory')
err.code = 'ENOENT'
throw err
}
}
async appendFile(path: string, data: Buffer | string, options?: any): Promise<void> {
const buffer = Buffer.isBuffer(data) ? data : Buffer.from(data, options?.encoding || 'utf8')
return this.vfs.appendFile(path, buffer, options)
}
async realpath(path: string): Promise<string> {
return this.vfs.realpath(path)
}
async chmod(path: string, mode: number): Promise<void> {
return this.vfs.chmod(path, mode)
}
async chown(path: string, uid: number, gid: number): Promise<void> {
return this.vfs.chown(path, uid, gid)
}
async utimes(path: string, atime: Date, mtime: Date): Promise<void> {
return this.vfs.utimes(path, atime, mtime)
}
async symlink(target: string, path: string): Promise<void> {
return this.vfs.symlink(target, path)
}
async readlink(path: string): Promise<string> {
return this.vfs.readlink(path)
}
// VFS Extensions
async search(query: string, options?: any) {
return this.vfs.search(query, options)
}
async findSimilar(path: string, options?: any) {
return this.vfs.findSimilar(path, options)
}
async importDirectory(sourcePath: string, options?: any) {
return this.vfs.importDirectory(sourcePath, options)
}
}
// Export a convenience function to create fs replacement
export function createFS(vfs: VirtualFileSystem): FSCompat {
return new FSCompat(vfs)
}

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/**
* Brainy Virtual Filesystem
*
* A simplified fs-compatible filesystem that stores data in Brainy
* Works across all storage adapters and scales to millions of files
*/
// Core VFS
export { VirtualFileSystem } from './VirtualFileSystem.js'
export { PathResolver } from './PathResolver.js'
export * from './types.js'
// MIME Type Detection
export { MimeTypeDetector, mimeDetector } from './MimeTypeDetector.js'
// fs compatibility layer
export { FSCompat, createFS } from './FSCompat.js'
// Directory import
export { DirectoryImporter } from './importers/DirectoryImporter.js'
// Streaming
export { VFSReadStream } from './streams/VFSReadStream.js'
export { VFSWriteStream } from './streams/VFSWriteStream.js'
// Convenience alias
export { VirtualFileSystem as VFS } from './VirtualFileSystem.js'

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import { describe, it, expect, beforeEach } from 'vitest'
import { Brainy } from '../../../src/brainy.js'
import { InstancePool, createInstancePool } from '../../../src/import/InstancePool.js'
describe('InstancePool', () => {
let brain: Brainy
let pool: InstancePool
beforeEach(async () => {
brain = new Brainy({ requireSubtype: false, storage: { type: 'memory' } })
await brain.init()
pool = new InstancePool(brain)
})
describe('lazy initialization', () => {
it('should not create instances until requested', () => {
const stats = pool.getStats()
expect(stats.nlpCreated).toBe(false)
expect(stats.extractorCreated).toBe(false)
})
it('should create NLP instance on first access', async () => {
const nlp = await pool.getNLP()
expect(nlp).toBeDefined()
const stats = pool.getStats()
expect(stats.nlpCreated).toBe(true)
expect(stats.nlpReuses).toBe(1)
})
it('should create extractor instance on first access', () => {
const extractor = pool.getExtractor()
expect(extractor).toBeDefined()
const stats = pool.getStats()
expect(stats.extractorCreated).toBe(true)
expect(stats.extractorReuses).toBe(1)
})
})
describe('instance reuse', () => {
it('should return same NLP instance on multiple calls', async () => {
const nlp1 = await pool.getNLP()
const nlp2 = await pool.getNLP()
const nlp3 = await pool.getNLP()
expect(nlp1).toBe(nlp2)
expect(nlp2).toBe(nlp3)
const stats = pool.getStats()
expect(stats.nlpReuses).toBe(3)
})
it('should return same extractor instance on multiple calls', () => {
const extractor1 = pool.getExtractor()
const extractor2 = pool.getExtractor()
const extractor3 = pool.getExtractor()
expect(extractor1).toBe(extractor2)
expect(extractor2).toBe(extractor3)
const stats = pool.getStats()
expect(stats.extractorReuses).toBe(3)
})
it('should track reuse counts correctly', async () => {
await pool.getNLP()
await pool.getNLP()
pool.getExtractor()
pool.getExtractor()
pool.getExtractor()
const stats = pool.getStats()
expect(stats.nlpReuses).toBe(2)
expect(stats.extractorReuses).toBe(3)
})
})
describe('initialization', () => {
it('should initialize all instances with init()', async () => {
await pool.init()
expect(pool.isInitialized()).toBe(true)
const stats = pool.getStats()
expect(stats.nlpCreated).toBe(true)
expect(stats.extractorCreated).toBe(true)
expect(stats.initialized).toBe(true)
})
it('should handle concurrent init calls safely', async () => {
// Call init multiple times concurrently
const promises = [
pool.init(),
pool.init(),
pool.init()
]
await Promise.all(promises)
// Should only initialize once
expect(pool.isInitialized()).toBe(true)
})
it('should auto-initialize NLP when accessed', async () => {
const nlp = await pool.getNLP()
// NLP is lazy-initialized but extractor might not be
const stats = pool.getStats()
expect(stats.nlpCreated).toBe(true)
expect(stats.initialized).toBe(true)
})
it('should provide sync access to NLP', () => {
const nlp = pool.getNLPSync()
expect(nlp).toBeDefined()
const stats = pool.getStats()
expect(stats.nlpCreated).toBe(true)
})
})
describe('statistics', () => {
it('should track creation time', async () => {
await pool.init()
const stats = pool.getStats()
expect(stats.creationTime).toBeGreaterThanOrEqual(0)
})
it('should calculate memory saved', async () => {
// Use instances multiple times
await pool.getNLP()
await pool.getNLP()
await pool.getNLP()
pool.getExtractor()
pool.getExtractor()
const stats = pool.getStats()
expect(stats.memorySaved).toBeGreaterThan(0)
})
it('should reset statistics', async () => {
await pool.getNLP()
pool.getExtractor()
pool.resetStats()
const stats = pool.getStats()
expect(stats.nlpReuses).toBe(0)
expect(stats.extractorReuses).toBe(0)
expect(stats.creationTime).toBe(0)
})
it('should provide string representation', async () => {
await pool.init()
const str = pool.toString()
expect(str).toContain('InstancePool')
expect(str).toContain('nlp=true')
expect(str).toContain('extractor=true')
})
})
describe('memory efficiency', () => {
it('should reuse instances in loop (no memory leak)', async () => {
const initialStats = pool.getStats()
// Simulate import loop
for (let i = 0; i < 1000; i++) {
const nlp = await pool.getNLP()
const extractor = pool.getExtractor()
// All iterations should get same instances
expect(nlp).toBeDefined()
expect(extractor).toBeDefined()
}
const finalStats = pool.getStats()
expect(finalStats.nlpReuses).toBe(1000)
expect(finalStats.extractorReuses).toBe(1000)
// Should have saved ~60GB of memory (1000 iterations × ~60MB)
expect(finalStats.memorySaved).toBeGreaterThan(50 * 1024 * 1024 * 1000) // > 50GB
})
it('should handle rapid concurrent access', async () => {
// Simulate concurrent row processing
const promises = []
for (let i = 0; i < 100; i++) {
promises.push(pool.getNLP())
promises.push(Promise.resolve(pool.getExtractor()))
}
await Promise.all(promises)
const stats = pool.getStats()
expect(stats.nlpReuses).toBe(100)
expect(stats.extractorReuses).toBe(100)
})
})
describe('cleanup', () => {
it('should cleanup instances', async () => {
await pool.init()
expect(pool.isInitialized()).toBe(true)
pool.cleanup()
expect(pool.isInitialized()).toBe(false)
const stats = pool.getStats()
expect(stats.nlpCreated).toBe(false)
expect(stats.extractorCreated).toBe(false)
})
it('should allow reinitialization after cleanup', async () => {
await pool.init()
pool.cleanup()
await pool.init()
expect(pool.isInitialized()).toBe(true)
})
})
describe('factory function', () => {
it('should create pool with auto-init', async () => {
const newPool = await createInstancePool(brain, true)
expect(newPool.isInitialized()).toBe(true)
})
it('should create pool without auto-init', async () => {
const newPool = await createInstancePool(brain, false)
expect(newPool.isInitialized()).toBe(false)
})
it('should default to auto-init', async () => {
const newPool = await createInstancePool(brain)
expect(newPool.isInitialized()).toBe(true)
})
})
describe('error handling', () => {
it('should handle missing NLP instance gracefully', async () => {
const emptyPool = new InstancePool(brain)
// Should create NLP on first access
const nlp = await emptyPool.getNLP()
expect(nlp).toBeDefined()
})
it('should handle missing extractor instance gracefully', () => {
const emptyPool = new InstancePool(brain)
// Should create extractor on first access
const extractor = emptyPool.getExtractor()
expect(extractor).toBeDefined()
})
})
describe('real-world usage', () => {
it('should work with actual NLP operations', async () => {
const nlp = await pool.getNLP()
// Should be initialized and ready to use
expect(nlp).toBeDefined()
// NLP should have init method
expect(typeof nlp.init).toBe('function')
})
it('should work with actual entity extraction', async () => {
const extractor = pool.getExtractor()
// Should be ready to use
expect(extractor).toBeDefined()
// Can call extractor methods
const entities = await extractor.extract('Paris is a beautiful city', {
confidence: 0.5
})
expect(Array.isArray(entities)).toBe(true)
})
it('should handle full import workflow', async () => {
// Initialize pool
await pool.init()
// Simulate processing multiple rows
const rows = [
{ text: 'Paris is beautiful' },
{ text: 'London is historic' },
{ text: 'Tokyo is modern' }
]
for (const row of rows) {
const nlp = await pool.getNLP()
const extractor = pool.getExtractor()
// Process row - extract entities
const entities = await extractor.extract(row.text, { confidence: 0.5 })
expect(nlp).toBeDefined()
expect(extractor).toBeDefined()
expect(entities).toBeDefined()
}
// Verify instances were reused
const stats = pool.getStats()
expect(stats.nlpReuses).toBe(3)
expect(stats.extractorReuses).toBe(3)
})
})
})

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import { describe, it, expect } from 'vitest'
import {
autoDetectPreset,
getPreset,
getPresetNames,
explainPresetChoice,
createCustomPreset,
validatePreset,
formatPreset,
FAST_PRESET,
BALANCED_PRESET,
ACCURATE_PRESET,
EXPLICIT_PRESET,
PATTERN_PRESET,
PRESETS,
type ImportContext,
type PresetConfig
} from '../../../src/neural/presets.js'
describe('Presets', () => {
describe('preset definitions', () => {
it('should have all 5 presets defined', () => {
expect(PRESETS).toBeDefined()
expect(Object.keys(PRESETS)).toHaveLength(5)
expect(PRESETS.fast).toBe(FAST_PRESET)
expect(PRESETS.balanced).toBe(BALANCED_PRESET)
expect(PRESETS.accurate).toBe(ACCURATE_PRESET)
expect(PRESETS.explicit).toBe(EXPLICIT_PRESET)
expect(PRESETS.pattern).toBe(PATTERN_PRESET)
})
it('should have valid fast preset', () => {
expect(FAST_PRESET.name).toBe('fast')
expect(FAST_PRESET.signals.enabled).toEqual(['exact', 'pattern'])
expect(FAST_PRESET.strategies.enabled).toEqual(['explicit'])
expect(FAST_PRESET.streaming).toBe(true)
expect(FAST_PRESET.strategies.earlyTermination).toBe(true)
})
it('should have valid balanced preset', () => {
expect(BALANCED_PRESET.name).toBe('balanced')
expect(BALANCED_PRESET.signals.enabled).toEqual(['exact', 'embedding', 'pattern'])
expect(BALANCED_PRESET.strategies.enabled).toEqual(['explicit', 'pattern', 'embedding'])
expect(BALANCED_PRESET.streaming).toBe(false)
})
it('should have valid accurate preset', () => {
expect(ACCURATE_PRESET.name).toBe('accurate')
expect(ACCURATE_PRESET.signals.enabled).toEqual(['exact', 'embedding', 'pattern', 'context'])
expect(ACCURATE_PRESET.strategies.enabled).toEqual(['explicit', 'pattern', 'embedding'])
expect(ACCURATE_PRESET.strategies.earlyTermination).toBe(false)
})
it('should have valid explicit preset', () => {
expect(EXPLICIT_PRESET.name).toBe('explicit')
expect(EXPLICIT_PRESET.signals.enabled).toEqual(['exact', 'pattern'])
expect(EXPLICIT_PRESET.strategies.enabled).toEqual(['explicit', 'pattern'])
expect(EXPLICIT_PRESET.strategies.minConfidence).toBeGreaterThanOrEqual(0.80)
})
it('should have valid pattern preset', () => {
expect(PATTERN_PRESET.name).toBe('pattern')
expect(PATTERN_PRESET.signals.enabled).toEqual(['embedding', 'pattern', 'context'])
expect(PATTERN_PRESET.strategies.enabled).toEqual(['pattern', 'embedding'])
})
})
describe('autoDetectPreset', () => {
it('should return fast preset for large datasets', () => {
const context: ImportContext = {
rowCount: 15000,
fileSize: 5_000_000
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('fast')
})
it('should return fast preset for large files', () => {
const context: ImportContext = {
fileSize: 15_000_000
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('fast')
})
it('should return accurate preset for small datasets', () => {
const context: ImportContext = {
rowCount: 50
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('accurate')
})
it('should return explicit preset for Excel with explicit columns', () => {
const context: ImportContext = {
fileType: 'excel',
hasExplicitColumns: true,
rowCount: 500
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('explicit')
})
it('should return explicit preset for CSV with explicit columns', () => {
const context: ImportContext = {
fileType: 'csv',
hasExplicitColumns: true
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('explicit')
})
it('should return pattern preset for PDF files', () => {
const context: ImportContext = {
fileType: 'pdf',
rowCount: 200
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('pattern')
})
it('should return pattern preset for Markdown files', () => {
const context: ImportContext = {
fileType: 'markdown'
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('pattern')
})
it('should return pattern preset for narrative content', () => {
const context: ImportContext = {
hasNarrativeContent: true,
rowCount: 300
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('pattern')
})
it('should return pattern preset for long definitions', () => {
const context: ImportContext = {
avgDefinitionLength: 800,
fileType: 'csv'
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('pattern')
})
it('should return balanced preset for JSON', () => {
const context: ImportContext = {
fileType: 'json',
rowCount: 500
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('balanced')
})
it('should return balanced preset for medium datasets', () => {
const context: ImportContext = {
fileType: 'excel',
rowCount: 2000
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('balanced')
})
it('should return balanced preset for empty context', () => {
const preset = autoDetectPreset()
expect(preset.name).toBe('balanced')
})
it('should return balanced preset for unknown file type', () => {
const context: ImportContext = {
fileType: 'unknown',
rowCount: 500
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('balanced')
})
})
describe('getPreset', () => {
it('should get preset by name', () => {
expect(getPreset('fast')).toBe(FAST_PRESET)
expect(getPreset('balanced')).toBe(BALANCED_PRESET)
expect(getPreset('accurate')).toBe(ACCURATE_PRESET)
expect(getPreset('explicit')).toBe(EXPLICIT_PRESET)
expect(getPreset('pattern')).toBe(PATTERN_PRESET)
})
it('should be case-insensitive', () => {
expect(getPreset('FAST')).toBe(FAST_PRESET)
expect(getPreset('Balanced')).toBe(BALANCED_PRESET)
expect(getPreset('EXPLICIT')).toBe(EXPLICIT_PRESET)
})
it('should throw error for unknown preset', () => {
expect(() => getPreset('unknown')).toThrow('Unknown preset: unknown')
})
})
describe('getPresetNames', () => {
it('should return all preset names', () => {
const names = getPresetNames()
expect(names).toHaveLength(5)
expect(names).toContain('fast')
expect(names).toContain('balanced')
expect(names).toContain('accurate')
expect(names).toContain('explicit')
expect(names).toContain('pattern')
})
})
describe('explainPresetChoice', () => {
it('should explain large dataset choice', () => {
const context: ImportContext = {
rowCount: 15000,
fileSize: 12_000_000
}
const explanation = explainPresetChoice(context)
expect(explanation).toContain('Large dataset')
expect(explanation).toContain('15000 rows')
expect(explanation).toContain('fast preset')
})
it('should explain small dataset choice', () => {
const context: ImportContext = {
rowCount: 50
}
const explanation = explainPresetChoice(context)
expect(explanation).toContain('Small critical dataset')
expect(explanation).toContain('50 rows')
expect(explanation).toContain('accurate preset')
})
it('should explain explicit columns choice', () => {
const context: ImportContext = {
fileType: 'excel',
hasExplicitColumns: true
}
const explanation = explainPresetChoice(context)
expect(explanation).toContain('EXCEL')
expect(explanation).toContain('explicit relationship columns')
expect(explanation).toContain('explicit preset')
})
it('should explain narrative content choice', () => {
const context: ImportContext = {
fileType: 'pdf',
hasNarrativeContent: true
}
const explanation = explainPresetChoice(context)
expect(explanation).toContain('Narrative content')
expect(explanation).toContain('pattern preset')
})
it('should explain default choice', () => {
const context: ImportContext = {
rowCount: 500
}
const explanation = explainPresetChoice(context)
expect(explanation).toContain('balanced preset')
})
})
describe('createCustomPreset', () => {
it('should create custom preset from base', () => {
const custom = createCustomPreset('balanced', {
name: 'my-custom',
batchSize: 2000
})
expect(custom.name).toBe('my-custom')
expect(custom.batchSize).toBe(2000)
expect(custom.signals).toEqual(BALANCED_PRESET.signals)
expect(custom.strategies).toEqual(BALANCED_PRESET.strategies)
})
it('should override signals', () => {
const custom = createCustomPreset('fast', {
signals: {
enabled: ['embedding'],
weights: { embedding: 1.0, exact: 0, pattern: 0, context: 0 },
timeout: 200
}
})
expect(custom.signals.enabled).toEqual(['embedding'])
expect(custom.signals.timeout).toBe(200)
})
it('should override strategies', () => {
const custom = createCustomPreset('balanced', {
strategies: {
enabled: ['pattern'],
timeout: 500,
earlyTermination: false,
minConfidence: 0.75
}
})
expect(custom.strategies.enabled).toEqual(['pattern'])
expect(custom.strategies.timeout).toBe(500)
expect(custom.strategies.earlyTermination).toBe(false)
})
it('should merge partial signal overrides', () => {
const custom = createCustomPreset('balanced', {
signals: {
timeout: 300
} as any
})
expect(custom.signals.enabled).toEqual(BALANCED_PRESET.signals.enabled)
expect(custom.signals.timeout).toBe(300)
})
})
describe('validatePreset', () => {
it('should validate all built-in presets', () => {
expect(() => validatePreset(FAST_PRESET)).not.toThrow()
expect(() => validatePreset(BALANCED_PRESET)).not.toThrow()
expect(() => validatePreset(ACCURATE_PRESET)).not.toThrow()
expect(() => validatePreset(EXPLICIT_PRESET)).not.toThrow()
expect(() => validatePreset(PATTERN_PRESET)).not.toThrow()
})
it('should reject preset with no signals', () => {
const invalid: PresetConfig = {
...BALANCED_PRESET,
signals: {
...BALANCED_PRESET.signals,
enabled: []
}
}
expect(() => validatePreset(invalid)).toThrow('at least one enabled signal')
})
it('should reject preset with no strategies', () => {
const invalid: PresetConfig = {
...BALANCED_PRESET,
strategies: {
...BALANCED_PRESET.strategies,
enabled: []
}
}
expect(() => validatePreset(invalid)).toThrow('at least one enabled strategy')
})
it('should reject preset with invalid weight sum', () => {
const invalid: PresetConfig = {
...BALANCED_PRESET,
signals: {
enabled: ['exact', 'embedding'],
weights: {
exact: 0.3,
embedding: 0.5,
pattern: 0,
context: 0
},
timeout: 100
}
}
expect(() => validatePreset(invalid)).toThrow('weights must sum to 1.0')
})
it('should reject preset with negative timeout', () => {
const invalid: PresetConfig = {
...BALANCED_PRESET,
signals: {
...BALANCED_PRESET.signals,
timeout: -100
}
}
expect(() => validatePreset(invalid)).toThrow('Timeouts must be positive')
})
it('should reject preset with invalid batch size', () => {
const invalid: PresetConfig = {
...BALANCED_PRESET,
batchSize: 0
}
expect(() => validatePreset(invalid)).toThrow('Batch size must be positive')
})
})
describe('formatPreset', () => {
it('should format preset for display', () => {
const formatted = formatPreset(BALANCED_PRESET)
expect(formatted).toContain('Preset: balanced')
expect(formatted).toContain('Description:')
expect(formatted).toContain('Signals:')
expect(formatted).toContain('exact: 40%')
expect(formatted).toContain('embedding: 35%')
expect(formatted).toContain('Strategies:')
expect(formatted).toContain('explicit')
expect(formatted).toContain('pattern')
expect(formatted).toContain('embedding')
expect(formatted).toContain('Streaming: false')
expect(formatted).toContain('Batch size: 500')
})
it('should format fast preset correctly', () => {
const formatted = formatPreset(FAST_PRESET)
expect(formatted).toContain('fast')
expect(formatted).toContain('Streaming: true')
expect(formatted).toContain('Early termination: true')
})
})
describe('preset priorities', () => {
it('should prioritize size over explicit columns for large datasets', () => {
const context: ImportContext = {
rowCount: 20000,
fileType: 'excel',
hasExplicitColumns: true
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('fast') // Size trumps explicit
})
it('should prioritize small size over other factors', () => {
const context: ImportContext = {
rowCount: 50,
fileType: 'pdf',
hasNarrativeContent: true
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('accurate') // Small size trumps pattern
})
it('should prioritize explicit columns over narrative for Excel', () => {
const context: ImportContext = {
rowCount: 500,
fileType: 'excel',
hasExplicitColumns: true,
hasNarrativeContent: true
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('explicit') // Explicit trumps narrative
})
})
describe('edge cases', () => {
it('should handle zero row count', () => {
const context: ImportContext = {
rowCount: 0,
fileType: 'csv'
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('balanced')
})
it('should handle boundary row count (exactly 100)', () => {
const context: ImportContext = {
rowCount: 100
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('balanced') // Not accurate (< 100)
})
it('should handle boundary row count (exactly 10000)', () => {
const context: ImportContext = {
rowCount: 10000
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('balanced') // Not fast (> 10000)
})
it('should handle missing hasExplicitColumns flag', () => {
const context: ImportContext = {
fileType: 'excel',
rowCount: 500
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('balanced')
})
})
describe('real-world scenarios', () => {
it('should handle glossary correctly', () => {
const context: ImportContext = {
fileType: 'excel',
rowCount: 567,
hasExplicitColumns: true, // Has "Related Terms" column
fileSize: 50_000
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('explicit')
const explanation = explainPresetChoice(context)
expect(explanation).toContain('explicit')
})
it('should handle large CSV import', () => {
const context: ImportContext = {
fileType: 'csv',
rowCount: 50000,
fileSize: 25_000_000
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('fast')
expect(preset.streaming).toBe(true)
})
it('should handle PDF documentation', () => {
const context: ImportContext = {
fileType: 'pdf',
rowCount: 150,
hasNarrativeContent: true,
avgDefinitionLength: 600
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('pattern')
})
it('should handle JSON API import', () => {
const context: ImportContext = {
fileType: 'json',
rowCount: 1000,
fileSize: 500_000
}
const preset = autoDetectPreset(context)
expect(preset.name).toBe('balanced')
})
})
})

View file

@ -5,7 +5,7 @@
*/ */
import { describe, it, expect } from 'vitest' import { describe, it, expect } from 'vitest'
import { VirtualFileSystem } from '../../src/vfs/index.js' import { VirtualFileSystem } from '../../src/vfs/VirtualFileSystem.js'
import { Brainy } from '../../src/brainy.js' import { Brainy } from '../../src/brainy.js'
describe('VFS Initialization', () => { describe('VFS Initialization', () => {

View file

@ -6,7 +6,7 @@
*/ */
import { describe, it, expect, beforeEach, afterEach } from 'vitest' import { describe, it, expect, beforeEach, afterEach } from 'vitest'
import { VirtualFileSystem } from '../../src/vfs/index.js' import { VirtualFileSystem } from '../../src/vfs/VirtualFileSystem.js'
import { Brainy } from '../../src/brainy.js' import { Brainy } from '../../src/brainy.js'
import { VFSErrorCode } from '../../src/vfs/types.js' import { VFSErrorCode } from '../../src/vfs/types.js'