chore: recovery checkpoint - v3.0 API successfully recovered

CRITICAL CHECKPOINT - DO NOT PUSH TO GITHUB

Recovery Status:
- Successfully recovered brainy.ts from compiled JavaScript
- All core v3.0 API methods functional (add, get, update, delete, relate, find, etc.)
- Neural subsystem intact (562KB embedded patterns, NLP working)
- Augmentation pipeline operational (20+ augmentations)
- HNSW clustering system complete
- Triple Intelligence compiled (needs constructor fix)
- Test suite validates functionality

Changes preserved:
- 898 files with changes from last 3 days
- 144,475 insertions
- All augmentation improvements
- All test coverage enhancements
- Complete v3.0 feature set

This is a LOCAL checkpoint only - contains recovered work after corruption incident.
Created backup in .backups/brainy-full-20250910-151314.tar.gz

Branch: recovery-checkpoint-20250910-151433
Date: Wed Sep 10 03:18:04 PM PDT 2025

.recovery-workspace/dist-backup-20250910-141917/storage/adapters/memoryStorage.d.ts

@@ -0,0 +1,172 @@
+/**
+ * Memory Storage Adapter
+ * In-memory storage adapter for environments where persistent storage is not available or needed
+ */
+import { GraphVerb, HNSWNoun, HNSWVerb, StatisticsData } from '../../coreTypes.js';
+import { BaseStorage } from '../baseStorage.js';
+import { PaginatedResult } from '../../types/paginationTypes.js';
+/**
+ * In-memory storage adapter
+ * Uses Maps to store data in memory
+ */
+export declare class MemoryStorage extends BaseStorage {
+    private nouns;
+    private verbs;
+    private metadata;
+    private nounMetadata;
+    private verbMetadata;
+    private statistics;
+    constructor();
+    /**
+     * Initialize the storage adapter
+     * Nothing to initialize for in-memory storage
+     */
+    init(): Promise<void>;
+    /**
+     * Save a noun to storage
+     */
+    protected saveNoun_internal(noun: HNSWNoun): Promise<void>;
+    /**
+     * Get a noun from storage
+     */
+    protected getNoun_internal(id: string): Promise<HNSWNoun | null>;
+    /**
+     * Get nouns with pagination and filtering
+     * @param options Pagination and filtering options
+     * @returns Promise that resolves to a paginated result of nouns
+     */
+    getNouns(options?: {
+        pagination?: {
+            offset?: number;
+            limit?: number;
+            cursor?: string;
+        };
+        filter?: {
+            nounType?: string | string[];
+            service?: string | string[];
+            metadata?: Record<string, any>;
+        };
+    }): Promise<PaginatedResult<HNSWNoun>>;
+    /**
+     * Get nouns with pagination - simplified interface for compatibility
+     */
+    getNounsWithPagination(options?: {
+        limit?: number;
+        cursor?: string;
+        filter?: any;
+    }): Promise<{
+        items: HNSWNoun[];
+        totalCount: number;
+        hasMore: boolean;
+        nextCursor?: string;
+    }>;
+    /**
+     * Get nouns by noun type
+     * @param nounType The noun type to filter by
+     * @returns Promise that resolves to an array of nouns of the specified noun type
+     * @deprecated Use getNouns() with filter.nounType instead
+     */
+    protected getNounsByNounType_internal(nounType: string): Promise<HNSWNoun[]>;
+    /**
+     * Delete a noun from storage
+     */
+    protected deleteNoun_internal(id: string): Promise<void>;
+    /**
+     * Save a verb to storage
+     */
+    protected saveVerb_internal(verb: HNSWVerb): Promise<void>;
+    /**
+     * Get a verb from storage
+     */
+    protected getVerb_internal(id: string): Promise<HNSWVerb | null>;
+    /**
+     * Get verbs with pagination and filtering
+     * @param options Pagination and filtering options
+     * @returns Promise that resolves to a paginated result of verbs
+     */
+    getVerbs(options?: {
+        pagination?: {
+            offset?: number;
+            limit?: number;
+            cursor?: string;
+        };
+        filter?: {
+            verbType?: string | string[];
+            sourceId?: string | string[];
+            targetId?: string | string[];
+            service?: string | string[];
+            metadata?: Record<string, any>;
+        };
+    }): Promise<PaginatedResult<GraphVerb>>;
+    /**
+     * Get verbs by source
+     * @deprecated Use getVerbs() with filter.sourceId instead
+     */
+    protected getVerbsBySource_internal(sourceId: string): Promise<GraphVerb[]>;
+    /**
+     * Get verbs by target
+     * @deprecated Use getVerbs() with filter.targetId instead
+     */
+    protected getVerbsByTarget_internal(targetId: string): Promise<GraphVerb[]>;
+    /**
+     * Get verbs by type
+     * @deprecated Use getVerbs() with filter.verbType instead
+     */
+    protected getVerbsByType_internal(type: string): Promise<GraphVerb[]>;
+    /**
+     * Delete a verb from storage
+     */
+    protected deleteVerb_internal(id: string): Promise<void>;
+    /**
+     * Save metadata to storage
+     */
+    saveMetadata(id: string, metadata: any): Promise<void>;
+    /**
+     * Get metadata from storage
+     */
+    getMetadata(id: string): Promise<any | null>;
+    /**
+     * Get multiple metadata objects in batches (CRITICAL: Prevents socket exhaustion)
+     * Memory storage implementation is simple since all data is already in memory
+     */
+    getMetadataBatch(ids: string[]): Promise<Map<string, any>>;
+    /**
+     * Save noun metadata to storage (internal implementation)
+     */
+    protected saveNounMetadata_internal(id: string, metadata: any): Promise<void>;
+    /**
+     * Get noun metadata from storage
+     */
+    getNounMetadata(id: string): Promise<any | null>;
+    /**
+     * Save verb metadata to storage (internal implementation)
+     */
+    protected saveVerbMetadata_internal(id: string, metadata: any): Promise<void>;
+    /**
+     * Get verb metadata from storage
+     */
+    getVerbMetadata(id: string): Promise<any | null>;
+    /**
+     * Clear all data from storage
+     */
+    clear(): Promise<void>;
+    /**
+     * Get information about storage usage and capacity
+     */
+    getStorageStatus(): Promise<{
+        type: string;
+        used: number;
+        quota: number | null;
+        details?: Record<string, any>;
+    }>;
+    /**
+     * Save statistics data to storage
+     * @param statistics The statistics data to save
+     */
+    protected saveStatisticsData(statistics: StatisticsData): Promise<void>;
+    /**
+     * Get statistics data from storage
+     * @returns Promise that resolves to the statistics data or null if not found
+     */
+    protected getStatisticsData(): Promise<StatisticsData | null>;
+}