chore: recovery checkpoint - v3.0 API successfully recovered

CRITICAL CHECKPOINT - DO NOT PUSH TO GITHUB

Recovery Status:
- Successfully recovered brainy.ts from compiled JavaScript
- All core v3.0 API methods functional (add, get, update, delete, relate, find, etc.)
- Neural subsystem intact (562KB embedded patterns, NLP working)
- Augmentation pipeline operational (20+ augmentations)
- HNSW clustering system complete
- Triple Intelligence compiled (needs constructor fix)
- Test suite validates functionality

Changes preserved:
- 898 files with changes from last 3 days
- 144,475 insertions
- All augmentation improvements
- All test coverage enhancements
- Complete v3.0 feature set

This is a LOCAL checkpoint only - contains recovered work after corruption incident.
Created backup in .backups/brainy-full-20250910-151314.tar.gz

Branch: recovery-checkpoint-20250910-151433
Date: Wed Sep 10 03:18:04 PM PDT 2025

.recovery-workspace/dist-backup-20250910-141917/augmentationRegistry.js

@@ -0,0 +1,54 @@
+/**
+ * Augmentation Registry (Compatibility Layer)
+ *
+ * @deprecated This module provides backward compatibility for old augmentation
+ * loading code. All new code should use the AugmentationRegistry class directly
+ * on Brainy instances.
+ */
+/**
+ * Registry of all available augmentations (for compatibility)
+ * @deprecated Use brain.augmentations instead
+ */
+export const availableAugmentations = [];
+/**
+ * Compatibility wrapper for registerAugmentation
+ * @deprecated Use brain.augmentations.register instead
+ */
+export function registerAugmentation(augmentation) {
+    console.warn('registerAugmentation is deprecated. Use brain.augmentations.register instead.');
+    // For compatibility, just add to the list (but it won't actually do anything)
+    availableAugmentations.push(augmentation);
+    return augmentation;
+}
+/**
+ * Sets the default pipeline instance (compatibility)
+ * @deprecated Use brain.augmentations instead
+ */
+export function setDefaultPipeline(pipeline) {
+    console.warn('setDefaultPipeline is deprecated. Use brain.augmentations instead.');
+}
+/**
+ * Initializes the augmentation pipeline (compatibility)
+ * @deprecated Use brain.augmentations instead
+ */
+export function initializeAugmentationPipeline(pipelineInstance) {
+    console.warn('initializeAugmentationPipeline is deprecated. Use brain.augmentations instead.');
+    return pipelineInstance || {};
+}
+/**
+ * Enables or disables an augmentation by name (compatibility)
+ * @deprecated Use brain.augmentations instead
+ */
+export function setAugmentationEnabled(name, enabled) {
+    console.warn('setAugmentationEnabled is deprecated. Use brain.augmentations instead.');
+    return false;
+}
+/**
+ * Gets all augmentations of a specific type (compatibility)
+ * @deprecated Use brain.augmentations instead
+ */
+export function getAugmentationsByType(type) {
+    console.warn('getAugmentationsByType is deprecated. Use brain.augmentations instead.');
+    return [];
+}
+//# sourceMappingURL=augmentationRegistry.js.map