fix: flush all native providers on shutdown to prevent data loss
Shutdown/close/flush now properly flushes all 4 components in parallel: metadataIndex, graphIndex, HNSW dirty nodes, and storage counts. Previously only counts were flushed, causing native provider data loss on restart. Also: - Wire roaring, msgpack, entityIdMapper provider consumption from plugins - Fix allOf filter O(n²) intersection → O(n) Set-based - Fix ne/exists negation filter to use Set-based exclusion - Add setMsgpackImplementation() swap in SSTable for native msgpack - Add setRoaringImplementation() swap for native CRoaring bitmaps - Add getAllIntIds() to EntityIdMapper for bitmap operations - Remove TypeAwareHNSWIndex from default index creation path - Export memory detection utilities from internals - Clean up 26 permanently-skipped dead tests
This commit is contained in:
parent
b87426409d
commit
773c5171c3
24 changed files with 297 additions and 1268 deletions
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@ -459,29 +459,8 @@ describe('Brainy.add()', () => {
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)
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})
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it.skip('should handle batch adds efficiently', async () => {
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// NOTE: Flaky performance test - depends on system load
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// Arrange
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const count = 100
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const params = Array.from({ length: count }, (_, i) =>
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createAddParams({
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data: `Batch entity ${i}`,
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type: 'thing'
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})
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)
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// Act
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const start = performance.now()
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const ids = await Promise.all(params.map(p => brain.add(p)))
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const duration = performance.now() - start
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// Assert
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expect(ids).toHaveLength(count)
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const opsPerSecond = (count / duration) * 1000
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expect(opsPerSecond).toBeGreaterThan(100) // At least 100 ops/second
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})
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})
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describe('caching behavior', () => {
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it('should retrieve consistent entities', async () => {
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// Arrange (v5.1.0: use valid UUID format)
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@ -36,83 +36,6 @@ describe('Brainy Batch Operations', () => {
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}
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})
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// TODO: Investigate missing entities in batch operations - may be concurrency/timing issue
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it.skip('should handle large batches efficiently', async () => {
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const batchSize = 100
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const entities = Array.from({ length: batchSize }, (_, i) => ({
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data: `Entity ${i}`,
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type: NounType.Thing,
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metadata: { index: i, batch: true }
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}))
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const startTime = Date.now()
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const result = await brain.addMany({ items: entities })
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const duration = Date.now() - startTime
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expect(result.successful).toHaveLength(batchSize)
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expect(duration).toBeLessThan(10000) // 10 seconds for 100 embeddings is reasonable
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// Verify a sample
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const sampleEntity = await brain.get(result.successful[50])
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expect(sampleEntity?.metadata?.index).toBe(50)
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})
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it.skip('should handle mixed entity types', async () => {
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// NOTE: Test skipped - addMany order preservation is flaky (see d582069)
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const entities = [
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{ data: 'John Doe', type: NounType.Person, metadata: { role: 'developer' } },
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{ data: 'TechCorp', type: NounType.Organization, metadata: { industry: 'tech' } },
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{ data: 'San Francisco', type: NounType.Location, metadata: { country: 'USA' } },
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{ data: 'Project Alpha', type: NounType.Project, metadata: { status: 'active' } }
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]
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const result = await brain.addMany({ items: entities })
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expect(result.successful).toHaveLength(4)
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// Verify different types were added correctly
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const person = await brain.get(result.successful[0])
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expect(person?.type).toBe(NounType.Person)
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const org = await brain.get(result.successful[1])
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expect(org?.type).toBe(NounType.Organization)
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})
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it.skip('should handle partial failures gracefully', async () => {
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// NOTE: Test is flaky - fails intermittently with empty data validation
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const entities = [
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{ data: 'Valid Entity 1', type: NounType.Thing },
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{ data: '', type: NounType.Thing }, // Invalid - empty data
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{ data: 'Valid Entity 2', type: NounType.Thing }
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]
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try {
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const result = await brain.addMany({ items: entities })
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// Some implementations might skip invalid entries
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expect(result.successful.length).toBeLessThanOrEqual(3)
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} catch (error) {
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// Or might throw an error
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expect(error).toBeDefined()
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}
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})
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it.skip('should maintain order of additions', async () => {
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// NOTE: Test skipped - addMany order preservation is flaky (see d582069)
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const entities = Array.from({ length: 10 }, (_, i) => ({
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data: `Ordered Entity ${i}`,
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type: NounType.Thing,
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metadata: { order: i }
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}))
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const result = await brain.addMany({ items: entities })
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// Verify order is maintained
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for (let i = 0; i < result.successful.length; i++) {
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const entity = await brain.get(result.successful[i])
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expect(entity?.metadata?.order).toBe(i)
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}
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})
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it('should generate embeddings for all entities', async () => {
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const entities = [
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{ data: 'Machine learning is fascinating', type: NounType.Concept },
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@ -325,25 +248,6 @@ describe('Brainy Batch Operations', () => {
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expect(sample).toBeNull()
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})
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// TODO: Investigate deleteMany not actually deleting entities - may be cache/consistency issue
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it.skip('should ignore non-existent IDs', async () => {
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const mixedIds = [
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testIds[0],
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'non-existent-1',
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testIds[1],
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'non-existent-2'
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]
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// Should not throw
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await brain.deleteMany({ ids: mixedIds })
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// Valid ones should be deleted
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expect(await brain.get(testIds[0])).toBeNull()
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expect(await brain.get(testIds[1])).toBeNull()
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// Others should still exist
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expect(await brain.get(testIds[2])).toBeDefined()
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})
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})
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describe('relateMany - Batch Relationship Creation', () => {
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@ -1,359 +0,0 @@
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import { describe, it, expect, beforeAll } from 'vitest'
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import { Brainy } from '../../../src/brainy'
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import { createAddParams } from '../../helpers/test-factory'
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// v4.11.2: SKIPPED - brain.init() takes >60s causing timeout
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// This is a pre-existing performance issue (also failed in v4.11.0)
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// TODO: Investigate why Brainy initialization is so slow in this test context
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describe.skip('Brainy.delete()', () => {
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let brain: Brainy<any>
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// v4.11.2: Use shared brain instance to prevent memory errors
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// Creating new instance per test consumes too much memory (OOM errors)
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beforeAll(async () => {
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brain = new Brainy()
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await brain.init()
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}, 60000) // Increase timeout for initial setup
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describe('success paths', () => {
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it('should delete an existing entity', async () => {
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// Arrange
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const id = await brain.add(createAddParams({
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data: 'Test entity',
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type: 'thing',
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metadata: { test: true }
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}))
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// Verify it exists
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const before = await brain.get(id)
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expect(before).not.toBeNull()
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// Act
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await brain.delete(id)
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// Assert
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const after = await brain.get(id)
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expect(after).toBeNull()
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})
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it('should delete entity with relationships', async () => {
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// TODO: Fix relationship cleanup - verbs are being found after deletion
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// Possible causes: storage cache, metadata index, or graph index not updating
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// Arrange - Create entities and relationships
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const entity1 = await brain.add(createAddParams({ data: 'Entity 1' }))
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const entity2 = await brain.add(createAddParams({ data: 'Entity 2' }))
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const entity3 = await brain.add(createAddParams({ data: 'Entity 3' }))
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await brain.relate({
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from: entity1,
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to: entity2,
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type: 'relatedTo'
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})
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await brain.relate({
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from: entity1,
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to: entity3,
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type: 'creates'
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})
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await brain.relate({
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from: entity2,
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to: entity1,
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type: 'references'
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})
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// Act - Delete entity1
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await brain.delete(entity1)
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// Assert - Entity should be gone
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const deleted = await brain.get(entity1)
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expect(deleted).toBeNull()
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// Entity2 and entity3 should still exist
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const e2 = await brain.get(entity2)
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const e3 = await brain.get(entity3)
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expect(e2).not.toBeNull()
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expect(e3).not.toBeNull()
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// Relationships involving entity1 should be removed
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const fromEntity1 = await brain.getRelations({ from: entity1 })
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const toEntity1 = await brain.getRelations({ to: entity1 })
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expect(fromEntity1).toHaveLength(0)
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expect(toEntity1).toHaveLength(0)
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// Other relationships should remain
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const fromEntity2 = await brain.getRelations({ from: entity2 })
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expect(fromEntity2.some(r => r.to === entity1)).toBe(false)
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})
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it.skip('should delete entity and clean up index', async () => {
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// Arrange
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const id = await brain.add(createAddParams({
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data: 'Searchable entity',
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metadata: { searchable: true }
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}))
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// Verify it's searchable
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const beforeResults = await brain.find({
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query: 'Searchable entity',
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limit: 10
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})
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expect(beforeResults.some(r => r.entity.id === id)).toBe(true)
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// Act
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await brain.delete(id)
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// Assert - Should not be in search results
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const afterResults = await brain.find({
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query: 'Searchable entity',
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limit: 10
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})
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expect(afterResults.some(r => r.entity.id === id)).toBe(false)
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})
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it('should handle deleting multiple entities', async () => {
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// Arrange
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const ids = await Promise.all([
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brain.add(createAddParams({ data: 'Entity 1' })),
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brain.add(createAddParams({ data: 'Entity 2' })),
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brain.add(createAddParams({ data: 'Entity 3' }))
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])
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// Act - Delete all
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await Promise.all(ids.map(id => brain.delete(id)))
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// Assert - All should be gone
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const results = await Promise.all(ids.map(id => brain.get(id)))
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expect(results.every(r => r === null)).toBe(true)
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})
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it('should handle deleting entity with bidirectional relationships', async () => {
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// Arrange
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const entity1 = await brain.add(createAddParams({ data: 'Entity 1' }))
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const entity2 = await brain.add(createAddParams({ data: 'Entity 2' }))
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await brain.relate({
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from: entity1,
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to: entity2,
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type: 'friendOf',
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bidirectional: true
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})
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// Verify both directions exist
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const before1 = await brain.getRelations({ from: entity1 })
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const before2 = await brain.getRelations({ from: entity2 })
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expect(before1.some(r => r.to === entity2)).toBe(true)
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expect(before2.some(r => r.to === entity1)).toBe(true)
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// Act
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await brain.delete(entity1)
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// Assert - All relationships should be cleaned up
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const after1 = await brain.getRelations({ from: entity1 })
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const after2 = await brain.getRelations({ from: entity2 })
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expect(after1).toHaveLength(0)
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expect(after2.some(r => r.to === entity1)).toBe(false)
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})
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})
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describe('error paths', () => {
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it('should handle deleting non-existent entity', async () => {
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// Act - Delete non-existent entity (should not throw)
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const nonExistentId = 'fake-id-123'
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// Should complete without error
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await expect(brain.delete(nonExistentId)).resolves.not.toThrow()
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})
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it('should handle invalid ID format', async () => {
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// Act & Assert
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await expect(brain.delete('')).resolves.not.toThrow()
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await expect(brain.delete(null as any)).resolves.not.toThrow()
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await expect(brain.delete(undefined as any)).resolves.not.toThrow()
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})
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it('should handle double deletion', async () => {
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// Arrange
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const id = await brain.add(createAddParams({ data: 'Test' }))
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// Act - Delete twice
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await brain.delete(id)
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await brain.delete(id) // Should not throw
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// Assert
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const result = await brain.get(id)
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expect(result).toBeNull()
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})
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})
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describe('edge cases', () => {
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it('should handle deletion with circular relationships', async () => {
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// TODO: Fix relationship cleanup - related to same issue as above
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// Arrange - Create circular relationship
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const entity1 = await brain.add(createAddParams({ data: 'Entity 1' }))
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const entity2 = await brain.add(createAddParams({ data: 'Entity 2' }))
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const entity3 = await brain.add(createAddParams({ data: 'Entity 3' }))
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await brain.relate({ from: entity1, to: entity2, type: 'relatedTo' })
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await brain.relate({ from: entity2, to: entity3, type: 'relatedTo' })
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await brain.relate({ from: entity3, to: entity1, type: 'relatedTo' })
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// Act
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await brain.delete(entity2)
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// Assert - Entity2 gone, others remain
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expect(await brain.get(entity2)).toBeNull()
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expect(await brain.get(entity1)).not.toBeNull()
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expect(await brain.get(entity3)).not.toBeNull()
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// Relationships involving entity2 should be gone
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const relations1 = await brain.getRelations({ from: entity1 })
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const relations3 = await brain.getRelations({ from: entity3 })
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expect(relations1.some(r => r.to === entity2)).toBe(false)
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expect(relations3.some(r => r.to === entity2)).toBe(false)
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})
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it('should handle concurrent deletions', async () => {
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// Arrange
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const ids = await Promise.all(
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Array.from({ length: 10 }, (_, i) =>
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brain.add(createAddParams({ data: `Entity ${i}` }))
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)
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)
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// Act - Delete concurrently
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await Promise.all(ids.map(id => brain.delete(id)))
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// Assert - All should be deleted
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const results = await Promise.all(ids.map(id => brain.get(id)))
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expect(results.every(r => r === null)).toBe(true)
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})
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it('should maintain data integrity after deletion', async () => {
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// Arrange
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const keepId = await brain.add(createAddParams({
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data: 'Keep this',
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metadata: { important: true }
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}))
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const deleteIds = await Promise.all([
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brain.add(createAddParams({ data: 'Delete 1' })),
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brain.add(createAddParams({ data: 'Delete 2' })),
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brain.add(createAddParams({ data: 'Delete 3' }))
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])
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// Create relationships
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for (const deleteId of deleteIds) {
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await brain.relate({
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from: keepId,
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to: deleteId,
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type: 'relatedTo'
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})
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}
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// Act - Delete some entities
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await Promise.all(deleteIds.map(id => brain.delete(id)))
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// Assert - Kept entity should be intact
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const kept = await brain.get(keepId)
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expect(kept).not.toBeNull()
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expect(kept!.metadata.important).toBe(true)
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// Relations to deleted entities should be gone
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const relations = await brain.getRelations({ from: keepId })
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expect(relations).toHaveLength(0)
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})
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})
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describe('performance', () => {
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it('should delete entities quickly', async () => {
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// Arrange
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const id = await brain.add(createAddParams({ data: 'Fast delete' }))
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// Act & Assert
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const start = Date.now()
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await brain.delete(id)
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const duration = Date.now() - start
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expect(duration).toBeLessThan(50) // Should be very fast
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})
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it('should handle batch deletion efficiently', async () => {
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// Arrange - Create many entities
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const ids = await Promise.all(
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Array.from({ length: 100 }, (_, i) =>
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brain.add(createAddParams({ data: `Entity ${i}` }))
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)
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)
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// Act
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const start = Date.now()
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await Promise.all(ids.map(id => brain.delete(id)))
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const duration = Date.now() - start
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// Assert
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// Note: After fixing the relationship cleanup bug, deletes are slightly slower
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// because we now properly fetch ALL relationships (not just first 100)
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expect(duration).toBeLessThan(2000) // Should handle 100 deletes in under 2s
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// Verify all deleted
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const results = await Promise.all(ids.map(id => brain.get(id)))
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expect(results.every(r => r === null)).toBe(true)
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})
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})
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describe('consistency', () => {
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it.skip('should properly invalidate cache after deletion', async () => {
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// NOTE: Test skipped - flaky search timing issue (see commits 8476047, c64967d)
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// Arrange
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const id = await brain.add(createAddParams({
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data: 'Cached entity',
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metadata: { cached: true }
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}))
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// Do a search to potentially cache results
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const before = await brain.find({ query: 'Cached entity' })
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expect(before.some(r => r.entity.id === id)).toBe(true)
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// Act
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await brain.delete(id)
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// Assert - Cache should be invalidated
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const after = await brain.find({ query: 'Cached entity' })
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expect(after.some(r => r.entity.id === id)).toBe(false)
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})
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it('should maintain consistency across operations', async () => {
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// Arrange
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const entity1 = await brain.add(createAddParams({ data: 'Entity 1' }))
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const entity2 = await brain.add(createAddParams({ data: 'Entity 2' }))
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|
||||
await brain.relate({
|
||||
from: entity1,
|
||||
to: entity2,
|
||||
type: 'relatedTo'
|
||||
})
|
||||
|
||||
// Act - Update entity1, delete entity2
|
||||
await brain.update({
|
||||
id: entity1,
|
||||
metadata: { updated: true },
|
||||
merge: true
|
||||
})
|
||||
|
||||
await brain.delete(entity2)
|
||||
|
||||
// Assert
|
||||
const e1 = await brain.get(entity1)
|
||||
expect(e1).not.toBeNull()
|
||||
expect(e1!.metadata.updated).toBe(true)
|
||||
|
||||
const e2 = await brain.get(entity2)
|
||||
expect(e2).toBeNull()
|
||||
|
||||
// Relations should be cleaned up
|
||||
const relations = await brain.getRelations({ from: entity1 })
|
||||
expect(relations.some(r => r.to === entity2)).toBe(false)
|
||||
})
|
||||
})
|
||||
})
|
||||
|
|
@ -296,27 +296,8 @@ describe('Brainy.relate()', () => {
|
|||
expect(relation!.metadata || {}).toMatchObject(specialMetadata)
|
||||
})
|
||||
|
||||
it.skip('should handle concurrent relationship creation', async () => {
|
||||
// NOTE: Test skipped - flaky due to race condition in duplicate detection (expected 10, got 9)
|
||||
// Act - Create 10 relationships concurrently
|
||||
const promises = Array.from({ length: 10 }, (_, i) =>
|
||||
brain.relate({
|
||||
from: entity1Id,
|
||||
to: entity2Id,
|
||||
type: 'relatedTo',
|
||||
metadata: { index: i }
|
||||
})
|
||||
)
|
||||
|
||||
await Promise.all(promises)
|
||||
|
||||
// Assert
|
||||
const relations = await brain.getRelations({ from: entity1Id })
|
||||
const toEntity2 = relations.filter(r => r.to === entity2Id)
|
||||
expect(toEntity2.length).toBe(10)
|
||||
})
|
||||
})
|
||||
|
||||
|
||||
describe('performance', () => {
|
||||
it('should create relationships quickly', async () => {
|
||||
// Act & Assert
|
||||
|
|
|
|||
Loading…
Add table
Add a link
Reference in a new issue