feat(storage): implement base, file system, and memory storage adapters
- Added `BaseStorage` abstract class to provide common functionality for storage adapters. - Implemented `FileSystemStorage` adapter for Node.js environments, supporting persistent file-based storage. - Added directory structure management methods to `FileSystemStorage` (`ensureDirectoryExists`, `clear`, etc.). - Implemented `MemoryStorage` adapter for in-memory storage suitable for non-persistent environments. - Supported CRUD operations for nouns, verbs, and metadata in both `FileSystemStorage` and `MemoryStorage`. - Included utility methods like `mapToObject` for serialization and deserialization of complex data structures. Purpose: Provide extensible, reusable storage solutions with both persistent and non-persistent options for diverse application needs.
This commit is contained in:
parent
c94bf640f1
commit
5dd5af88be
9 changed files with 4549 additions and 2186 deletions
691
src/storage/adapters/opfsStorage.ts
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691
src/storage/adapters/opfsStorage.ts
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/**
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* OPFS (Origin Private File System) Storage Adapter
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* Provides persistent storage for the vector database using the Origin Private File System API
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*/
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import {GraphVerb, HNSWNoun} from '../../coreTypes.js'
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import {BaseStorage, NOUNS_DIR, VERBS_DIR, METADATA_DIR, INDEX_DIR} from '../baseStorage.js'
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import '../../types/fileSystemTypes.js'
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/**
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* Helper function to safely get a file from a FileSystemHandle
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* This is needed because TypeScript doesn't recognize that a FileSystemHandle
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* can be a FileSystemFileHandle which has the getFile method
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*/
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async function safeGetFile(handle: FileSystemHandle): Promise<File> {
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// Type cast to any to avoid TypeScript error
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return (handle as any).getFile()
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}
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// Type aliases for better readability
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type HNSWNode = HNSWNoun
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type Edge = GraphVerb
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// Root directory name for OPFS storage
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const ROOT_DIR = 'opfs-vector-db'
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/**
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* OPFS storage adapter for browser environments
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* Uses the Origin Private File System API to store data persistently
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*/
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export class OPFSStorage extends BaseStorage {
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private rootDir: FileSystemDirectoryHandle | null = null
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private nounsDir: FileSystemDirectoryHandle | null = null
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private verbsDir: FileSystemDirectoryHandle | null = null
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private metadataDir: FileSystemDirectoryHandle | null = null
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private indexDir: FileSystemDirectoryHandle | null = null
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private isAvailable = false
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private isPersistentRequested = false
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private isPersistentGranted = false
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constructor() {
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super()
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// Check if OPFS is available
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this.isAvailable =
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typeof navigator !== 'undefined' &&
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'storage' in navigator &&
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'getDirectory' in navigator.storage
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}
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/**
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* Initialize the storage adapter
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*/
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public async init(): Promise<void> {
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if (this.isInitialized) {
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return
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}
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if (!this.isAvailable) {
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throw new Error(
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'Origin Private File System is not available in this environment'
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)
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}
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try {
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// Get the root directory
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const root = await navigator.storage.getDirectory()
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// Create or get our app's root directory
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this.rootDir = await root.getDirectoryHandle(ROOT_DIR, {create: true})
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// Create or get nouns directory
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this.nounsDir = await this.rootDir.getDirectoryHandle(NOUNS_DIR, {
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create: true
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})
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// Create or get verbs directory
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this.verbsDir = await this.rootDir.getDirectoryHandle(VERBS_DIR, {
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create: true
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})
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// Create or get metadata directory
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this.metadataDir = await this.rootDir.getDirectoryHandle(METADATA_DIR, {
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create: true
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})
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// Create or get index directory
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this.indexDir = await this.rootDir.getDirectoryHandle(INDEX_DIR, {
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create: true
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})
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this.isInitialized = true
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} catch (error) {
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console.error('Failed to initialize OPFS storage:', error)
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throw new Error(`Failed to initialize OPFS storage: ${error}`)
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}
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}
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/**
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* Check if OPFS is available in the current environment
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*/
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public isOPFSAvailable(): boolean {
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return this.isAvailable
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}
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/**
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* Request persistent storage permission from the user
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* @returns Promise that resolves to true if permission was granted, false otherwise
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*/
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public async requestPersistentStorage(): Promise<boolean> {
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if (!this.isAvailable) {
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console.warn('Cannot request persistent storage: OPFS is not available')
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return false
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}
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try {
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// Check if persistence is already granted
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this.isPersistentGranted = await navigator.storage.persisted()
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if (!this.isPersistentGranted) {
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// Request permission for persistent storage
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this.isPersistentGranted = await navigator.storage.persist()
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}
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this.isPersistentRequested = true
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return this.isPersistentGranted
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} catch (error) {
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console.warn('Failed to request persistent storage:', error)
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return false
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}
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}
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/**
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* Check if persistent storage is granted
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* @returns Promise that resolves to true if persistent storage is granted, false otherwise
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*/
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public async isPersistent(): Promise<boolean> {
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if (!this.isAvailable) {
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return false
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}
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try {
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this.isPersistentGranted = await navigator.storage.persisted()
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return this.isPersistentGranted
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} catch (error) {
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console.warn('Failed to check persistent storage status:', error)
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return false
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}
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}
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/**
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* Save a node to storage
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*/
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protected async saveNode(node: HNSWNode): Promise<void> {
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await this.ensureInitialized()
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try {
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// Convert connections Map to a serializable format
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const serializableNode = {
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...node,
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connections: this.mapToObject(node.connections, (set) =>
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Array.from(set as Set<string>)
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)
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}
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// Create or get the file for this noun
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const fileHandle = await this.nounsDir!.getFileHandle(node.id, {
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create: true
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})
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// Write the noun data to the file
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const writable = await fileHandle.createWritable()
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await writable.write(JSON.stringify(serializableNode))
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await writable.close()
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} catch (error) {
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console.error(`Failed to save node ${node.id}:`, error)
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throw new Error(`Failed to save node ${node.id}: ${error}`)
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}
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}
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/**
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* Get a node from storage
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*/
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protected async getNode(id: string): Promise<HNSWNode | null> {
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await this.ensureInitialized()
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try {
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// Get the file handle for this node
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const fileHandle = await this.nounsDir!.getFileHandle(id)
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// Read the node data from the file
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const file = await fileHandle.getFile()
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const text = await file.text()
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const data = JSON.parse(text)
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// Convert serialized connections back to Map<number, Set<string>>
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const connections = new Map<number, Set<string>>()
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for (const [level, nodeIds] of Object.entries(data.connections)) {
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connections.set(Number(level), new Set(nodeIds as string[]))
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}
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return {
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id: data.id,
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vector: data.vector,
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connections
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}
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} catch (error) {
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// Node not found or other error
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return null
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}
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}
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/**
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* Get all nodes from storage
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*/
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protected async getAllNodes(): Promise<HNSWNode[]> {
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await this.ensureInitialized()
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const allNodes: HNSWNode[] = []
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try {
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// Iterate through all files in the nouns directory
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for await (const [name, handle] of this.nounsDir!.entries()) {
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if (handle.kind === 'file') {
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try {
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// Read the node data from the file
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const file = await safeGetFile(handle)
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const text = await file.text()
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const data = JSON.parse(text)
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// Convert serialized connections back to Map<number, Set<string>>
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const connections = new Map<number, Set<string>>()
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for (const [level, nodeIds] of Object.entries(data.connections)) {
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connections.set(Number(level), new Set(nodeIds as string[]))
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}
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allNodes.push({
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id: data.id,
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vector: data.vector,
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connections
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})
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} catch (error) {
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console.error(`Error reading node file ${name}:`, error)
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}
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}
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}
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} catch (error) {
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console.error('Error reading nouns directory:', error)
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}
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return allNodes
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}
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/**
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* Get nodes by noun type
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* @param nounType The noun type to filter by
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* @returns Promise that resolves to an array of nodes of the specified noun type
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*/
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protected async getNodesByNounType(nounType: string): Promise<HNSWNode[]> {
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await this.ensureInitialized()
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const nodes: HNSWNode[] = []
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try {
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// Iterate through all files in the nouns directory
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for await (const [name, handle] of this.nounsDir!.entries()) {
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if (handle.kind === 'file') {
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try {
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// Read the node data from the file
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const file = await safeGetFile(handle)
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const text = await file.text()
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const data = JSON.parse(text)
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// Get the metadata to check the noun type
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const metadata = await this.getMetadata(data.id)
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// Include the node if its noun type matches the requested type
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if (metadata && metadata.noun === nounType) {
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// Convert serialized connections back to Map<number, Set<string>>
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const connections = new Map<number, Set<string>>()
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for (const [level, nodeIds] of Object.entries(data.connections)) {
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connections.set(Number(level), new Set(nodeIds as string[]))
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}
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nodes.push({
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id: data.id,
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vector: data.vector,
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connections
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})
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}
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} catch (error) {
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console.error(`Error reading node file ${name}:`, error)
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}
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}
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}
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} catch (error) {
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console.error('Error reading nouns directory:', error)
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}
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return nodes
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}
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/**
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* Delete a node from storage
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*/
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protected async deleteNode(id: string): Promise<void> {
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await this.ensureInitialized()
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try {
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await this.nounsDir!.removeEntry(id)
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} catch (error: any) {
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// Ignore NotFoundError, which means the file doesn't exist
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if (error.name !== 'NotFoundError') {
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console.error(`Error deleting node ${id}:`, error)
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throw error
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}
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}
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}
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/**
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* Save an edge to storage
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*/
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protected async saveEdge(edge: Edge): Promise<void> {
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await this.ensureInitialized()
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try {
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// Convert connections Map to a serializable format
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const serializableEdge = {
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...edge,
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connections: this.mapToObject(edge.connections, (set) =>
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Array.from(set as Set<string>)
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)
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}
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// Create or get the file for this verb
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const fileHandle = await this.verbsDir!.getFileHandle(edge.id, {
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create: true
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})
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// Write the verb data to the file
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const writable = await fileHandle.createWritable()
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await writable.write(JSON.stringify(serializableEdge))
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await writable.close()
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} catch (error) {
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console.error(`Failed to save edge ${edge.id}:`, error)
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throw new Error(`Failed to save edge ${edge.id}: ${error}`)
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}
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}
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/**
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* Get an edge from storage
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*/
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protected async getEdge(id: string): Promise<Edge | null> {
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await this.ensureInitialized()
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try {
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// Get the file handle for this edge
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const fileHandle = await this.verbsDir!.getFileHandle(id)
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// Read the edge data from the file
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const file = await fileHandle.getFile()
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const text = await file.text()
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const data = JSON.parse(text)
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// Convert serialized connections back to Map<number, Set<string>>
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const connections = new Map<number, Set<string>>()
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for (const [level, nodeIds] of Object.entries(data.connections)) {
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connections.set(Number(level), new Set(nodeIds as string[]))
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}
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return {
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id: data.id,
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vector: data.vector,
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connections,
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sourceId: data.sourceId,
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targetId: data.targetId,
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type: data.type,
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weight: data.weight,
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metadata: data.metadata
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}
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} catch (error) {
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// Edge not found or other error
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return null
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}
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}
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/**
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* Get all edges from storage
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*/
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protected async getAllEdges(): Promise<Edge[]> {
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await this.ensureInitialized()
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const allEdges: Edge[] = []
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try {
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// Iterate through all files in the verbs directory
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for await (const [name, handle] of this.verbsDir!.entries()) {
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if (handle.kind === 'file') {
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try {
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// Read the edge data from the file
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const file = await safeGetFile(handle)
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const text = await file.text()
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const data = JSON.parse(text)
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// Convert serialized connections back to Map<number, Set<string>>
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const connections = new Map<number, Set<string>>()
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for (const [level, nodeIds] of Object.entries(data.connections)) {
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connections.set(Number(level), new Set(nodeIds as string[]))
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}
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allEdges.push({
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id: data.id,
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vector: data.vector,
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connections,
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sourceId: data.sourceId,
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targetId: data.targetId,
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type: data.type,
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weight: data.weight,
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metadata: data.metadata
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})
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} catch (error) {
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console.error(`Error reading edge file ${name}:`, error)
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}
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}
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}
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} catch (error) {
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console.error('Error reading verbs directory:', error)
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}
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return allEdges
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}
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/**
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* Get edges by source
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*/
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protected async getEdgesBySource(sourceId: string): Promise<Edge[]> {
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const edges = await this.getAllEdges()
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return edges.filter((edge) => edge.sourceId === sourceId)
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}
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/**
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* Get edges by target
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*/
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protected async getEdgesByTarget(targetId: string): Promise<Edge[]> {
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const edges = await this.getAllEdges()
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return edges.filter((edge) => edge.targetId === targetId)
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}
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/**
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* Get edges by type
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*/
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protected async getEdgesByType(type: string): Promise<Edge[]> {
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const edges = await this.getAllEdges()
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return edges.filter((edge) => edge.type === type)
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}
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/**
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* Delete an edge from storage
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*/
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protected async deleteEdge(id: string): Promise<void> {
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await this.ensureInitialized()
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try {
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await this.verbsDir!.removeEntry(id)
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} catch (error: any) {
|
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// Ignore NotFoundError, which means the file doesn't exist
|
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if (error.name !== 'NotFoundError') {
|
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console.error(`Error deleting edge ${id}:`, error)
|
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throw error
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}
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}
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}
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/**
|
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* Save metadata to storage
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*/
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public async saveMetadata(id: string, metadata: any): Promise<void> {
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await this.ensureInitialized()
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try {
|
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// Create or get the file for this metadata
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const fileHandle = await this.metadataDir!.getFileHandle(id, {
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create: true
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})
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// Write the metadata to the file
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const writable = await fileHandle.createWritable()
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await writable.write(JSON.stringify(metadata))
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await writable.close()
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} catch (error) {
|
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console.error(`Failed to save metadata ${id}:`, error)
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throw new Error(`Failed to save metadata ${id}: ${error}`)
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}
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}
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|
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/**
|
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* Get metadata from storage
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*/
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public async getMetadata(id: string): Promise<any | null> {
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await this.ensureInitialized()
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try {
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// Get the file handle for this metadata
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const fileHandle = await this.metadataDir!.getFileHandle(id)
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|
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// Read the metadata from the file
|
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const file = await fileHandle.getFile()
|
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const text = await file.text()
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return JSON.parse(text)
|
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} catch (error) {
|
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// Metadata not found or other error
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return null
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}
|
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}
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|
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/**
|
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* Clear all data from storage
|
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*/
|
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public async clear(): Promise<void> {
|
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await this.ensureInitialized()
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|
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// Helper function to remove all files in a directory
|
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const removeDirectoryContents = async (
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dirHandle: FileSystemDirectoryHandle
|
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): Promise<void> => {
|
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try {
|
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for await (const [name, handle] of dirHandle.entries()) {
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await dirHandle.removeEntry(name)
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}
|
||||
} catch (error) {
|
||||
console.error(`Error removing directory contents:`, error)
|
||||
throw error
|
||||
}
|
||||
}
|
||||
|
||||
try {
|
||||
// Remove all files in the nouns directory
|
||||
await removeDirectoryContents(this.nounsDir!)
|
||||
|
||||
// Remove all files in the verbs directory
|
||||
await removeDirectoryContents(this.verbsDir!)
|
||||
|
||||
// Remove all files in the metadata directory
|
||||
await removeDirectoryContents(this.metadataDir!)
|
||||
|
||||
// Remove all files in the index directory
|
||||
await removeDirectoryContents(this.indexDir!)
|
||||
} catch (error) {
|
||||
console.error('Error clearing storage:', error)
|
||||
throw error
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Get information about storage usage and capacity
|
||||
*/
|
||||
public async getStorageStatus(): Promise<{
|
||||
type: string
|
||||
used: number
|
||||
quota: number | null
|
||||
details?: Record<string, any>
|
||||
}> {
|
||||
await this.ensureInitialized()
|
||||
|
||||
try {
|
||||
// Calculate the total size of all files in the storage directories
|
||||
let totalSize = 0
|
||||
|
||||
// Helper function to calculate directory size
|
||||
const calculateDirSize = async (
|
||||
dirHandle: FileSystemDirectoryHandle
|
||||
): Promise<number> => {
|
||||
let size = 0
|
||||
try {
|
||||
for await (const [name, handle] of dirHandle.entries()) {
|
||||
if (handle.kind === 'file') {
|
||||
const file = await (handle as FileSystemFileHandle).getFile()
|
||||
size += file.size
|
||||
} else if (handle.kind === 'directory') {
|
||||
size += await calculateDirSize(
|
||||
handle as FileSystemDirectoryHandle
|
||||
)
|
||||
}
|
||||
}
|
||||
} catch (error) {
|
||||
console.warn(`Error calculating size for directory:`, error)
|
||||
}
|
||||
return size
|
||||
}
|
||||
|
||||
// Helper function to count files in a directory
|
||||
const countFilesInDirectory = async (
|
||||
dirHandle: FileSystemDirectoryHandle
|
||||
): Promise<number> => {
|
||||
let count = 0
|
||||
try {
|
||||
for await (const [name, handle] of dirHandle.entries()) {
|
||||
if (handle.kind === 'file') {
|
||||
count++
|
||||
}
|
||||
}
|
||||
} catch (error) {
|
||||
console.warn(`Error counting files in directory:`, error)
|
||||
}
|
||||
return count
|
||||
}
|
||||
|
||||
// Calculate size for each directory
|
||||
if (this.nounsDir) {
|
||||
totalSize += await calculateDirSize(this.nounsDir)
|
||||
}
|
||||
if (this.verbsDir) {
|
||||
totalSize += await calculateDirSize(this.verbsDir)
|
||||
}
|
||||
if (this.metadataDir) {
|
||||
totalSize += await calculateDirSize(this.metadataDir)
|
||||
}
|
||||
if (this.indexDir) {
|
||||
totalSize += await calculateDirSize(this.indexDir)
|
||||
}
|
||||
|
||||
// Get storage quota information using the Storage API
|
||||
let quota = null
|
||||
let details: Record<string, any> = {
|
||||
isPersistent: await this.isPersistent(),
|
||||
nounTypes: {}
|
||||
}
|
||||
|
||||
try {
|
||||
if (navigator.storage && navigator.storage.estimate) {
|
||||
const estimate = await navigator.storage.estimate()
|
||||
quota = estimate.quota || null
|
||||
details = {
|
||||
...details,
|
||||
usage: estimate.usage,
|
||||
quota: estimate.quota,
|
||||
freePercentage: estimate.quota
|
||||
? ((estimate.quota - (estimate.usage || 0)) / estimate.quota) *
|
||||
100
|
||||
: null
|
||||
}
|
||||
}
|
||||
} catch (error) {
|
||||
console.warn('Unable to get storage estimate:', error)
|
||||
}
|
||||
|
||||
// Count files in each directory
|
||||
if (this.nounsDir) {
|
||||
details.nounsCount = await countFilesInDirectory(this.nounsDir)
|
||||
}
|
||||
if (this.verbsDir) {
|
||||
details.verbsCount = await countFilesInDirectory(this.verbsDir)
|
||||
}
|
||||
if (this.metadataDir) {
|
||||
details.metadataCount = await countFilesInDirectory(this.metadataDir)
|
||||
}
|
||||
|
||||
// Count nouns by type using metadata
|
||||
const nounTypeCounts: Record<string, number> = {}
|
||||
if (this.metadataDir) {
|
||||
for await (const [name, handle] of this.metadataDir.entries()) {
|
||||
if (handle.kind === 'file') {
|
||||
try {
|
||||
const file = await safeGetFile(handle)
|
||||
const text = await file.text()
|
||||
const metadata = JSON.parse(text)
|
||||
if (metadata.noun) {
|
||||
nounTypeCounts[metadata.noun] = (nounTypeCounts[metadata.noun] || 0) + 1
|
||||
}
|
||||
} catch (error) {
|
||||
console.error(`Error reading metadata file ${name}:`, error)
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
details.nounTypes = nounTypeCounts
|
||||
|
||||
return {
|
||||
type: 'opfs',
|
||||
used: totalSize,
|
||||
quota,
|
||||
details
|
||||
}
|
||||
} catch (error) {
|
||||
console.error('Failed to get storage status:', error)
|
||||
return {
|
||||
type: 'opfs',
|
||||
used: 0,
|
||||
quota: null,
|
||||
details: {error: String(error)}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
Loading…
Add table
Add a link
Reference in a new issue