fix: resolve VFS race conditions and decompression errors

Fixes duplicate directory nodes caused by concurrent writes and file read
decompression errors caused by rawData compression state mismatch. Adds
mutex-based concurrency control for mkdir operations and explicit compression
tracking for file reads.

Resolves issues reported by Brain Studio team:
- Issue #1: Duplicate directory nodes in getDirectChildren
- Issue #2: Z_DATA_ERROR when reading file content
This commit is contained in:
David Snelling 2025-09-30 12:53:39 -07:00
parent b3426604ee
commit 1a2661fc40
2 changed files with 366 additions and 72 deletions

View file

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/**
* VFS Bug Fix Tests
*
* Tests for issues reported by Brain Studio team:
* - Issue #1: Duplicate directory nodes
* - Issue #2: File read decompression error
*/
import { describe, it, expect, beforeEach } from 'vitest'
import { Brainy } from '../../src/brainy.js'
import { VirtualFileSystem } from '../../src/vfs/VirtualFileSystem.js'
describe('VFS Bug Fixes', () => {
let brain: Brainy
let vfs: VirtualFileSystem
beforeEach(async () => {
// Create fresh instance for each test
brain = new Brainy({
storage: { type: 'memory' },
embeddingModel: 'Q8'
})
await brain.init()
vfs = brain.vfs()
await vfs.init()
})
describe('Issue #1: Duplicate Directory Nodes', () => {
it('should not create duplicate directory entries when writing multiple files to same directory', async () => {
// Write multiple files to the same directory (reproduce the bug scenario)
await vfs.writeFile('/src/index.ts', 'export const foo = 1')
await vfs.writeFile('/src/types.ts', 'export type Foo = string')
await vfs.writeFile('/src/utils.ts', 'export function bar() {}')
await vfs.writeFile('/README.md', '# Project')
// Verify files exist
expect(await vfs.exists('/src/index.ts')).toBe(true)
expect(await vfs.exists('/README.md')).toBe(true)
// Get direct children of root
const children = await vfs.getDirectChildren('/')
// Debug: print what we got
console.log('Root children:', children.map(c => ({name: c.metadata.name, type: c.metadata.vfsType})))
// Count how many times 'src' appears
const srcDirs = children.filter(child =>
child.metadata.name === 'src' && child.metadata.vfsType === 'directory'
)
// Should only have ONE src directory
expect(srcDirs.length).toBe(1)
// Total children should be at least 2: src directory + README.md
expect(children.length).toBeGreaterThanOrEqual(2)
// Verify children have correct types
const srcDir = children.find(c => c.metadata.name === 'src')
const readme = children.find(c => c.metadata.name === 'README.md')
expect(srcDir?.metadata.vfsType).toBe('directory')
expect(readme?.metadata.vfsType).toBe('file')
})
it('should not create duplicate Contains relationships', async () => {
// Write multiple files to same directory
await vfs.writeFile('/src/a.ts', 'a')
await vfs.writeFile('/src/b.ts', 'b')
await vfs.writeFile('/src/c.ts', 'c')
// Get the root entity and src directory entity
const rootEntity = await vfs.getEntity('/')
const srcEntity = await vfs.getEntity('/src')
// Get all Contains relationships from root
const relations = await brain.getRelations({
from: rootEntity.id,
type: 'contains' as any
})
// Filter for relationships pointing to src directory
const srcRelations = relations.filter(r => r.to === srcEntity.id)
// Should only have ONE relationship from root to src
expect(srcRelations.length).toBe(1)
})
it('should handle concurrent file writes without creating duplicates', async () => {
// Write multiple files concurrently (more likely to trigger race conditions)
await Promise.all([
vfs.writeFile('/data/file1.json', '{"a": 1}'),
vfs.writeFile('/data/file2.json', '{"b": 2}'),
vfs.writeFile('/data/file3.json', '{"c": 3}'),
vfs.writeFile('/data/file4.json', '{"d": 4}')
])
const children = await vfs.getDirectChildren('/')
const dataDirs = children.filter(c => c.metadata.name === 'data')
// Should only have ONE data directory
expect(dataDirs.length).toBe(1)
// Check the data directory has exactly 4 files
const dataChildren = await vfs.getDirectChildren('/data')
expect(dataChildren.length).toBe(4)
})
})
describe('Issue #2: File Read Decompression Error', () => {
it('should read file content without decompression errors', async () => {
const content = 'Hello World! This is test content.'
// Write file
await vfs.writeFile('/test.txt', content)
// Read file - should NOT throw decompression error
const readContent = await vfs.readFile('/test.txt')
// Content should match
expect(readContent.toString('utf8')).toBe(content)
})
it('should handle reading files with various sizes', async () => {
const testFiles = [
{ path: '/small.txt', content: 'Small' },
{ path: '/medium.txt', content: 'x'.repeat(1000) },
{ path: '/large.txt', content: 'y'.repeat(50000) }
]
// Write all files
for (const file of testFiles) {
await vfs.writeFile(file.path, file.content)
}
// Read all files - none should error
for (const file of testFiles) {
const readContent = await vfs.readFile(file.path)
expect(readContent.toString('utf8')).toBe(file.content)
}
})
it('should correctly handle rawData storage without compression', async () => {
const content = 'Test content for rawData'
// Write file
await vfs.writeFile('/test.md', content)
// Get the entity to inspect storage
const entity = await vfs.getEntity('/test.md')
// Should have rawData in metadata
expect(entity.metadata.rawData).toBeDefined()
// rawData should be base64 encoded
const decodedRawData = Buffer.from(entity.metadata.rawData!, 'base64').toString('utf8')
expect(decodedRawData).toBe(content)
// Read should work without decompression issues
const readContent = await vfs.readFile('/test.md')
expect(readContent.toString('utf8')).toBe(content)
})
it('should handle binary files correctly', async () => {
// Create a binary buffer
const binaryContent = Buffer.from([0x89, 0x50, 0x4E, 0x47, 0x0D, 0x0A, 0x1A, 0x0A])
// Write binary file
await vfs.writeFile('/image.png', binaryContent)
// Read binary file
const readContent = await vfs.readFile('/image.png')
// Should match exactly
expect(Buffer.compare(readContent, binaryContent)).toBe(0)
})
it('should handle reading after multiple writes', async () => {
// Write file
await vfs.writeFile('/counter.txt', '1')
// Update file multiple times
await vfs.writeFile('/counter.txt', '2')
await vfs.writeFile('/counter.txt', '3')
// Read should work
const content = await vfs.readFile('/counter.txt')
expect(content.toString('utf8')).toBe('3')
})
})
describe('Integration: Both Fixes Together', () => {
it('should handle the exact Brain Studio scenario', async () => {
// Reproduce exact scenario from bug report
const files = [
{ path: '/STRICT_TAXONOMY.md', content: 'Taxonomy content' },
{ path: '/README.md', content: 'README content' },
{ path: '/package.json', content: '{"name": "test"}' },
{ path: '/tsconfig.json', content: '{"compilerOptions": {}}' },
{ path: '/src/types.ts', content: 'export type Foo = string' },
{ path: '/src/webhook-handler.ts', content: 'export function handler() {}' },
{ path: '/src/index.ts', content: 'export * from "./types"' },
{ path: '/src/sync-engine.ts', content: 'export class Engine {}' },
{ path: '/src/asana-client.ts', content: 'export class Client {}' }
]
// Import all files
for (const file of files) {
await vfs.writeFile(file.path, file.content)
}
// Check root directory - should NOT have duplicate 'src' entries
const rootChildren = await vfs.getDirectChildren('/')
const srcDirs = rootChildren.filter(c =>
c.metadata.name === 'src' && c.metadata.vfsType === 'directory'
)
expect(srcDirs.length).toBe(1)
// Should have exactly 4 root items: src (dir) + 3 files
const rootFiles = rootChildren.filter(c => c.metadata.vfsType === 'file')
expect(rootFiles.length).toBe(4) // README, package.json, tsconfig.json, STRICT_TAXONOMY
// Check src directory has exactly 5 files
const srcChildren = await vfs.getDirectChildren('/src')
expect(srcChildren.length).toBe(5)
// Read all files - none should throw decompression errors
for (const file of files) {
const content = await vfs.readFile(file.path)
expect(content.toString('utf8')).toBe(file.content)
}
})
it('should maintain correct file count statistics', async () => {
// Write files
await vfs.writeFile('/src/a.ts', 'a')
await vfs.writeFile('/src/b.ts', 'b')
await vfs.writeFile('/docs/README.md', 'readme')
// Get statistics
const stats = await vfs.getProjectStats('/')
// Debug: Check what directories exist
const rootChildren = await vfs.getDirectChildren('/')
console.log('Root children (stats test):', rootChildren.map(c => ({name: c.metadata.name, type: c.metadata.vfsType})))
// Should have exactly 3 files
expect(stats.fileCount).toBe(3)
// Should have exactly 2 directories (src, docs)
// Note: If there's a duplicate, this will fail
expect(stats.directoryCount).toBe(2)
})
})
})